Znev000119.1
Basic Information
- Insect
- Zootermopsis nevadensis
- Gene Symbol
- ZFY
- Assembly
- GCA_000696155.1
- Location
- NW:657840-667218[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0035 0.13 12.2 0.1 1 23 8 30 8 30 0.97 2 14 7.6e-05 0.0027 17.4 1.1 2 23 71 92 71 92 0.94 3 14 0.002 0.072 13.0 0.5 3 23 97 118 96 118 0.94 4 14 0.0027 0.097 12.6 5.1 1 23 127 149 127 149 0.98 5 14 0.082 3 7.9 0.4 1 23 154 176 154 176 0.97 6 14 3.9e-05 0.0014 18.3 1.0 2 23 183 204 182 204 0.97 7 14 0.016 0.58 10.1 0.1 1 21 207 227 207 228 0.95 8 14 4e-08 1.4e-06 27.8 0.1 1 23 239 261 239 261 0.98 9 14 0.046 1.7 8.7 1.8 1 23 267 291 267 291 0.93 10 14 1.1e-05 0.0004 20.1 2.9 1 23 302 325 302 325 0.96 11 14 0.0011 0.039 13.8 2.2 1 23 331 353 331 353 0.97 12 14 0.62 22 5.1 1.5 1 22 359 380 359 382 0.87 13 14 4.9e-05 0.0018 18.1 6.1 1 23 388 410 388 410 0.98 14 14 3.2e-05 0.0011 18.6 2.7 1 23 416 439 416 439 0.95
Sequence Information
- Coding Sequence
- ATGTCCAACATGGAAGATTTGTTTAAATGTCCTGTGTGTGAAGTGGTTTCTGGTAATAAGAGTAGCCTTTTGTCTCATGTTGACAAACATAAAGGATTTCCACTTTCTTGCATAACATGTCATTCAAgtttcaagaataaattttcatatgatTGTCATTTAGTTTCTGAATTATGTAAGAAGAGTAACAAGTGTGTAGGACAATTGCGACAGTGCCCACAATGCCCACAGACTTTTCCCAATCGCAGACACCTCAACAAACATGTTGATGGTCACAGACGGAATAATTGTCAGTACTGTGATGCTCGGTTCACAACGCGAAAGGAAGTAACACTTCACATGGCAcaagaacacaaaatgaagCTGCAGAAGTCAAAGTATCAGTGTCAATTTTGTGAAAGGTGTTTTGTGAAGCAGGTGACCTTGTTTAATCACTACAATCAGCATGCAAATGGGAAGTTTGTATGTCAGAGCTGCGGATTATTTCTGGACAGTAAGGCGGAGTTTGAGACTCATAAGGAGAGGCATGAGCTAGAAAGGCCGTGGAAATGTACAAGATGTGGGACAACCTTCTCACGTCGACAGCAGTATGTGGTACACATGGAGAGTCATGAGAAGTACCAGTGTAAAACGTGCAATGTGGGGTTTGCTGCCAAGGCTACACTCCAGGAACACTCAAGAGTGTGTCAGAATCAGTCTGGTAAAGAGAGTCAATATGAGTGTCCTGAGTGTGGCAAGGTTTTCTCTCGTCAGGGGCAGCTTACGCTGCATCTGAAGGCCCACACAGGTGAAGAAGCTTATACCTGCCTAGTGTGTAAAAGTGGCTTCCAGACTGCTGAAGATTATAATCAGCATATCCGGTCGACTTGCCATGAGGTGGCCGAGGATGACCCGAATAAAACGCACAAGTGTGAGCAGTGCGACAGATCCTTCTCACAGGCAAACCATCTGGTGGAGCACATGAATCAACTGCATGGTGCTACACGCTCCTACAAGTGCAATTACTGTGAGCACTCCTCTAATAGTAGGGCCAACATGACACGACATCTCGCCTTGCACACTGAGAGGTGTCGCTTTGTCTGTGACCAATGTGGGGCAGCATTTCATGCATTAACAACTCTCAAAGACCACTGTAATTCTGTCCACTCAGAGTACCGAAACTTCTGTTGCACCACATGCAAGAAGACATTCAAATTACAGAATGACCTGAGAAGGCACATTCGTAGTCACTCTGATATGCGACCATTCAAGTGTCAATATTGTACCCAGGCATACAAACGTGCGTCGCACCTCAGAAGGCATGAGGAATCTATACATGGGGCCATCTTCAAACCCAGGAGATTACAGAGACTCGGGCGTGACGAAACATGTGCGTTAGTTCGTGTTGTCGATGAGTCTAAATCGTCAAGTGGCGGAATGAAGGAAGAAACCTCTGTAGTGCCCCAAGATCATCTCTGGACCTCTGCTGCTACATCTCAATCTGCTACTACTTCTAAAGCATCTGTTTTTACAAATCCAGTTTTGTCTTTGGTTGATGCAGATTCAGGCAAAGTAATAACACTGCAGGAGCTGTGTACTGTGTCAGAAGCCCAGATTCTGACTACGACCGGTAACTTATCGACGGCCGAAGTGCTGACCTTACCGCCTGATGACACACTGGCTACTATTGTTACATGTACAGATGGCACCACGTTAGATTCATTTCAGTCTGGAGAAGTGTTGCAAACAATTGAAGTGACCTATGACTTAACCTTCCCAACTTCACAGACCTtaacaactgtgttgtctagtTCTGAACCTCAATTAGTCTTTGCAACACCGATCACTATGTCTCTTGATGAGCACTCGACAGTGCTAACGGTGTCAGAAGTACATCCTACTGGTAATTTGAATGGAAAAGTGCAGTTGCTGGATCCACATGATGCTTCAAAACTCCCTGACACCATCTTCATTGAAGAAGGAAAACTCGAAGGTCTTGAGGAGGCGATGTTATTAGACAGCATAGAGCCAGCACGGCACATTACCTTAGAAAACTTCTCTGCACTCGATGATGGGGCGTTGCAGACGCAGGTCGGGATGACTGCTAGCTCAGCTGTCACTTTGCCAAACTTGCCAAATTCAGTTGAGTCAGTATTGCAGTTATGTCCTGAACGGCTGCCAGTGTCAAAAGACTGCACAGTCTTGTCTGACGGTCTTCTTACCTCCAGTTCTCTGCTAAGAGAACGTCTTATGTGTGGACCAAAGTTGAGGTCCTCAGCTTTACAATCTCTACACCATGTCCCATCACAATGCAATGACGATTTGGATGCCATAACTGTGACCTCAATTCCTTTTCCAGCAAATGTAACTGACAGTAGTACACAACCTCATCATGCTGTCTCAACACCCACTGTCTCATTTCCATTTCCCAGTGCATCTACTGATGGTTCCCATCTGGACTCTATGTTATCGATATCAAATTCTACGACACCCTCGTATGCAAGTATAAATGTTGAAAGTGCCAACCGTAATTCTGTAATAACTTCTTTTTGTGTTCCAAATTCCATTCATTCATCATGCACTGACATTTCCACTGACGGAACAAAAACAGATTCTTCGATTTCTCAGCTGTCGGTTCCAGATTCTGTTCTGCAATCTCACACCGACATCCGTCTCAGAGATACCTGTGCCAGCAGTCACGTCACGTCCGTCTCTGTTACAGCTTCCGTGCGCAATGTACGTGCTGCCATATCTTCTGCAGGCGCAAACCATGATTCGTCCATTTCTGCTTATATCGTTCCAAATTCAAGTGCATCTGTGGGATCTGGCATTTCTTATGACACTGTTGATCTTATTCATCCCCTGTGCCAAAATATATCTGGCATCACAAATGATTCTGAAACTATTTCTACTCTTACTATTCCAAGTTCAGTTCAGTCTTCACGTTCTGACATTGACAGCATCCCCACGGGCACTTCAGTTTCAGCACCGTCTGTCGGTGCTGTGGACGtaagtatttctgaaacagGTATCCATCCCAGTTGCACCATTTCATTACAGCCCCAAGATGCTAGCGTGGCTGTTGAAGGAACTCCCGCAGATTTGACGTTGGCACCCTTGCCTGTATCCACTCAAAGACATCCATCCTAG
- Protein Sequence
- MSNMEDLFKCPVCEVVSGNKSSLLSHVDKHKGFPLSCITCHSSFKNKFSYDCHLVSELCKKSNKCVGQLRQCPQCPQTFPNRRHLNKHVDGHRRNNCQYCDARFTTRKEVTLHMAQEHKMKLQKSKYQCQFCERCFVKQVTLFNHYNQHANGKFVCQSCGLFLDSKAEFETHKERHELERPWKCTRCGTTFSRRQQYVVHMESHEKYQCKTCNVGFAAKATLQEHSRVCQNQSGKESQYECPECGKVFSRQGQLTLHLKAHTGEEAYTCLVCKSGFQTAEDYNQHIRSTCHEVAEDDPNKTHKCEQCDRSFSQANHLVEHMNQLHGATRSYKCNYCEHSSNSRANMTRHLALHTERCRFVCDQCGAAFHALTTLKDHCNSVHSEYRNFCCTTCKKTFKLQNDLRRHIRSHSDMRPFKCQYCTQAYKRASHLRRHEESIHGAIFKPRRLQRLGRDETCALVRVVDESKSSSGGMKEETSVVPQDHLWTSAATSQSATTSKASVFTNPVLSLVDADSGKVITLQELCTVSEAQILTTTGNLSTAEVLTLPPDDTLATIVTCTDGTTLDSFQSGEVLQTIEVTYDLTFPTSQTLTTVLSSSEPQLVFATPITMSLDEHSTVLTVSEVHPTGNLNGKVQLLDPHDASKLPDTIFIEEGKLEGLEEAMLLDSIEPARHITLENFSALDDGALQTQVGMTASSAVTLPNLPNSVESVLQLCPERLPVSKDCTVLSDGLLTSSSLLRERLMCGPKLRSSALQSLHHVPSQCNDDLDAITVTSIPFPANVTDSSTQPHHAVSTPTVSFPFPSASTDGSHLDSMLSISNSTTPSYASINVESANRNSVITSFCVPNSIHSSCTDISTDGTKTDSSISQLSVPDSVLQSHTDIRLRDTCASSHVTSVSVTASVRNVRAAISSAGANHDSSISAYIVPNSSASVGSGISYDTVDLIHPLCQNISGITNDSETISTLTIPSSVQSSRSDIDSIPTGTSVSAPSVGAVDVSISETGIHPSCTISLQPQDASVAVEGTPADLTLAPLPVSTQRHPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -