Basic Information

Insect: Zootermopsis nevadensis
Gene Symbol: -
Assembly: GCA_000696155.1
Location: NW:138194-238131[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.001 0.037 13.9 3.3 1 23 277 299 277 299 0.97

2 11 7.4e-05 0.0027 17.5 6.4 1 23 305 327 305 327 0.96

3 11 6.2e-05 0.0022 17.7 4.7 1 23 333 355 333 355 0.99

4 11 2.6e-05 0.00093 18.9 2.1 1 23 361 383 361 383 0.96

5 11 1.4e-05 0.00049 19.8 1.5 1 23 389 411 389 411 0.96

6 11 1.1e-05 0.0004 20.1 0.1 1 23 417 439 417 439 0.98

7 11 0.001 0.037 13.9 0.8 1 23 444 466 444 466 0.97

8 11 0.00011 0.0039 17.0 1.7 1 23 473 495 473 495 0.96

9 11 0.00062 0.022 14.6 0.5 1 23 501 523 501 523 0.98

10 11 9.3e-05 0.0033 17.2 5.8 1 23 587 609 587 609 0.97

11 11 3.4e-05 0.0012 18.5 3.8 1 23 619 641 619 641 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.001	0.037	13.9	3.3	1	23	277	299	277	299	0.97
2	11	7.4e-05	0.0027	17.5	6.4	1	23	305	327	305	327	0.96
3	11	6.2e-05	0.0022	17.7	4.7	1	23	333	355	333	355	0.99
4	11	2.6e-05	0.00093	18.9	2.1	1	23	361	383	361	383	0.96
5	11	1.4e-05	0.00049	19.8	1.5	1	23	389	411	389	411	0.96
6	11	1.1e-05	0.0004	20.1	0.1	1	23	417	439	417	439	0.98
7	11	0.001	0.037	13.9	0.8	1	23	444	466	444	466	0.97
8	11	0.00011	0.0039	17.0	1.7	1	23	473	495	473	495	0.96
9	11	0.00062	0.022	14.6	0.5	1	23	501	523	501	523	0.98
10	11	9.3e-05	0.0033	17.2	5.8	1	23	587	609	587	609	0.97
11	11	3.4e-05	0.0012	18.5	3.8	1	23	619	641	619	641	0.96

Sequence Information

Coding Sequence: ATGCACTTTGACTCTCTGAAAGTTGTGTCTGAACACCTTGTGGAGAGAATCAAACTGGAAGACTCTCTTTTTCGTGATGTATTTCATAGTGGTGCTAGTTTTCCAATGTGTGCCGCTTCAGCACCCACATCATCATCTTACAGCAATCCATGGGCCGTTACCCAGCAGTGCAACTTGAACACCTGTAGTTCGTATATTAGTGATACAACAGTTGGTCAGGGAGCAAATAATGATagtcaaaataaaacaaaggctTATTCTGTAGGAAACAATCAAAATCCAGCTGCATTTATACaagcaacaaataattttaataggaatatgaataataattttatgtgcacAACTATGTTTTTAATGAATGACAACCTACAACCAAATAATGCCCATCAGTCACACAGCAATTCAAAAAAACATCATGATTTGTTCAATATTGCTTGTGAGAAAGGTTGCAACTGTGAAACAACAAACTCTCTGTTTCGTTCTGGTGGTGGACAGATATTTAATGCTGATAAACATGCTgcggctgctgctgctgctgtcgCTGCAAAACACTTCATGACTCCTTGTGGACCACTGCAATTAACTGCACAGGAGTGTAGTgaatttttactgaaaaaagTTGCCGTCTCCAACAGCTTAGCTGTATCTGATGGTTCTCATATAGGTGCTCAGAACAGTTGTAACACAAATGATGCACAGCAGAAGAACAGACATTCAGGAACAAGCTTGGATAATGCTCAAGAGACAAATAATAGCACAAGTGGGAAGTTGTCCAGTAGTGAGACTAGCTCTGGGCAGAGGTATCGAGTTGCCAAGGAGCGCCCTTTTTCATGCCAAGAGTGTGGAAAGTCATTTCTCCTGAAACACCATCTCGTGACACATGCTCGAGTTCACACTGGTGAACGGCCACATGTGTGTCCAGAGTGTGGAAAGAGTTTTGCACACAAGCACTGTCTTAGTACACATCTCCTTCTTCATAGTAGTCAGCGCCCTTATCAATGTCTTGAATGTAAGAAGTCATTCACTCTGAAACATCATCTTGTGACTCACGCTCGAGTTCATAGCCGGGATCGGCCATTCGTCTGTCGAGAGTGCGGGCGAACATTTCCTCAGAAGCGTCATTTGGCCACACACGCAAAGTTTCACTCGGGTGAGCGCCCACATGTGTGTGAGGAGTGTGGTGAATCATTCTCACGTGAGGACCATCTGGTGATCCATTCACGCTTCCATGGCGGACAGCACCCATATGTGTGTCCAGATTGTGGAAGTACTTTTGCCCGCAAATTTGAGCTGGTGAACCACGGACGCCTGCACGGTCGCATTCCCCATTCCTGCGATGTGTGTGGCAAGGAGTTCCTACAGAAGCGCACACTGCTCGCTCACGCTCGACTCCACGTGGAAGGAGAACGGCCATTTGTCTGCCAGCACTGTGGTGAAACTTTCCCACGCAGAACTGAACTTGTTGAGCACTCCCACATTCATGCAGATGAGAAGGCCTTCGTATGCAGGGAATGTGGTGATTGTTTCCCAAATCGAGAGGCTCTAGCTCTGCACTACCGTCTTCACGCCGGTGATCGTAACTTTGTCGCCGATTTGTGCGGTCTCGCGGCAGCATTTCAGCAGCCCGCGGCACACTTCCTGTGTCCAACTCCTCTTCACCCTACCGCCATGAATAAATTGAACCAGAGCTCTGCTGGAACCTCTGCGTCAAGTAGCGGTATAGTGCCGTCAACTCCGCAGCTGAAACCGAAGCCTCACGTGTGTCGTGACTGTGGCAAATGTTTTGCGCAGAAGCATGGACTTGCGCAACATAACAGGCGGCACAATGGTGGCAGCTGCGATATTAGACAGCATGCCTGTGACAAATGTGGTAAAGCGTTCTTTCAAAAGAACCATCTGGCTTTGCATCAGAGACAGCATATGGAGCATCCATCCTCAGGCTCCCCTACAGACACAAAGACGTTTGAAGTCAACATTCCAGTATCAGGAGAATAA
Protein Sequence: MHFDSLKVVSEHLVERIKLEDSLFRDVFHSGASFPMCAASAPTSSSYSNPWAVTQQCNLNTCSSYISDTTVGQGANNDSQNKTKAYSVGNNQNPAAFIQATNNFNRNMNNNFMCTTMFLMNDNLQPNNAHQSHSNSKKHHDLFNIACEKGCNCETTNSLFRSGGGQIFNADKHAAAAAAAVAAKHFMTPCGPLQLTAQECSEFLLKKVAVSNSLAVSDGSHIGAQNSCNTNDAQQKNRHSGTSLDNAQETNNSTSGKLSSSETSSGQRYRVAKERPFSCQECGKSFLLKHHLVTHARVHTGERPHVCPECGKSFAHKHCLSTHLLLHSSQRPYQCLECKKSFTLKHHLVTHARVHSRDRPFVCRECGRTFPQKRHLATHAKFHSGERPHVCEECGESFSREDHLVIHSRFHGGQHPYVCPDCGSTFARKFELVNHGRLHGRIPHSCDVCGKEFLQKRTLLAHARLHVEGERPFVCQHCGETFPRRTELVEHSHIHADEKAFVCRECGDCFPNREALALHYRLHAGDRNFVADLCGLAAAFQQPAAHFLCPTPLHPTAMNKLNQSSAGTSASSSGIVPSTPQLKPKPHVCRDCGKCFAQKHGLAQHNRRHNGGSCDIRQHACDKCGKAFFQKNHLALHQRQHMEHPSSGSPTDTKTFEVNIPVSGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00370411; iTF_00210122; iTF_00396659; iTF_01289179;
90% Identity: -
80% Identity: -