Basic Information

Insect: Zootermopsis nevadensis
Gene Symbol: bab1_7
Assembly: GCA_000696155.1
Location: NW:396136-444110[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 9.3e-06 0.00033 20.3 2.5 3 23 773 793 772 793 0.99

2 10 9e-05 0.0032 17.2 1.9 1 23 799 821 799 821 0.98

3 10 8.4e-07 3e-05 23.6 0.5 1 23 829 851 829 851 0.96

4 10 3.3e-05 0.0012 18.6 1.8 1 23 857 879 857 879 0.98

5 10 4.2e-06 0.00015 21.4 0.3 2 23 888 909 888 909 0.97

6 10 0.00014 0.0051 16.6 0.4 3 23 917 937 915 937 0.97

7 10 5.7e-06 0.00021 21.0 5.6 1 23 943 965 943 965 0.97

8 10 5.5e-07 2e-05 24.2 0.2 1 23 971 993 971 993 0.97

9 10 0.00081 0.029 14.2 6.3 1 23 999 1021 999 1021 0.98

10 10 5.7e-05 0.002 17.8 1.4 1 21 1027 1047 1027 1048 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	9.3e-06	0.00033	20.3	2.5	3	23	773	793	772	793	0.99
2	10	9e-05	0.0032	17.2	1.9	1	23	799	821	799	821	0.98
3	10	8.4e-07	3e-05	23.6	0.5	1	23	829	851	829	851	0.96
4	10	3.3e-05	0.0012	18.6	1.8	1	23	857	879	857	879	0.98
5	10	4.2e-06	0.00015	21.4	0.3	2	23	888	909	888	909	0.97
6	10	0.00014	0.0051	16.6	0.4	3	23	917	937	915	937	0.97
7	10	5.7e-06	0.00021	21.0	5.6	1	23	943	965	943	965	0.97
8	10	5.5e-07	2e-05	24.2	0.2	1	23	971	993	971	993	0.97
9	10	0.00081	0.029	14.2	6.3	1	23	999	1021	999	1021	0.98
10	10	5.7e-05	0.002	17.8	1.4	1	21	1027	1047	1027	1048	0.95

Sequence Information

Coding Sequence: ATGAGTGCCAACAATCTCGAGGTTCGCTGGAAGCACCACCAGGAGGGAGTGATGGACTATTTGAGGCAACTGCTGGTTTCTGAAGTCTTTGTCGATGTCACTCTGTGTTGCCAGAACAAGAGATTCAAGGCCCACAGGATTCTACTGTCCTCTTGCAGCTCCTACTTGCAGcAAGTACTGACGGAACACGTGGTTTCTGACCACGTGACGATCATTCTGCCCGACATTCACCCTGACGACATGCAGTGGCTTCTGGATTTCATGTACACCGGGTCGGTCGCCGTTCCTAGAAGTCGCTTGTCGTCTTTCCTCCAAGCAGCTGAGGCGCTGAACATCAAAATTTTGACCGACGTGGCTCAACTCCAGAAAACAACCGACAGTAGCTGCGTCGTCTCGTCTCCAGTGCTAGTCTTCAAACTAACAAAAGATCCAAACTTCCGAAAACACCCCATAAATCCTAATACAGACACTTGCATTATTAAGCCCCATAGTTTGACTGAAGACTGTAAAAATTCTTCATGTAAAGATGATGCCAAAATTAGGAGTGATTCTTCGAAGCTAGTGACCGATAAAGAGGACTTTAAGACTGTGACGGAGGACAGCAAGAGTTGTGTGTTTATGTGCTCTTCAGATGTTTCGTCTTACGTGCCGAAACGTTTTCAAAGTCCCATAGACAGCCACAGCATTTCGTGCAAGACGATGACTTACAATGCAGAGATAAGAAATAGCACGTCTCTTGGACACCCTTCAGAAAAGCCTTCAGCACGCCTGGAGACACCAGTTCACAATACATCGCCTTGCGATGCTAAAAACGCGGCGGGAAATTTTAACATCGATAACAGTTCGAGTATTTGTATTGGTAATAAACCTCAGGCAGACAGAGAATGTAACGACAAAGAATTGCCGTCGGAAGAACATTTCTCTTCTCCCGAATACGGGTTTAAACTCAACAACAGAGTCATTCCGAGCAGCATTAGCCCTGTATACAGACACGACACAGGGGTGATCGACTTACCCTTAAGGCATCGACCAGAAAACGCCGAACACTGTACTCTGAACCCCCAGCGTTTATCGCAATGGCCAAAACCACTTCCATCACTGATGCCGTTAAACAACCGGACGTGGTACAACGGACAAGTTCCGGCTTGCTACCTCGGCAAAGACTGCACAGTTAATGGGGCGCTGCAACTGGACCGGAAGGATACTTTTCCAGGACATCTGCAAAGCATGAAGGACATCGTCCCAAACAGTAAGACTCGGACCAGGAGCATGGAAGTTGACCAGCATCTCCCGAATGAGCACAGGCATGTGAAAAACGTGTGGTTCTACGGCACGGACAAAGTGCTGCATCACAACGGGCAGACTCCAGTCGCAGACTGCAGGCCTTCGAGAAGGCCGTCACACAGAGTACCTCGCCTGTGCCCCATAGTACCTCCCTCCCCGTGGGCTCAGCATCACCGACCGCCGTGCGCTACCCCGGTGGCCTGCCCGCCCATAGCGATGAACTACCCGGCCATCAGCTGGACAGTACCACCTGTACACGTGGCCGTCGACCAACAACCAACGCCTCTTCTAGCACGTCCAGACAATCAGCAGCGACCGAGTGATACTGCGAGGCCACATGCATCCATTAAAGCAGCTAAGCTGTCACCCCCTCCCCAAAGCAGCGACAAGAGTCCCGATGAAACGACGCCTCTTCGTAGGAGACCTTCGGAGAGCGCGGCCATGTTCTGCAAACTGAAGTCGAGGCGACTGGAAGAATTCTACAGAGAAGAAACGGCGAGACAACTTAGAAGTGGGAGCAGCGAAGAGGAAGTTGCCAGCGACTTATCGACGAAGTCCCCACAAAGTCCGGTACGAAGCACGCATCTAAACAGTTCCAGAGGCACGCCGGAATACCGGAAAGTGACCAGTTCGCCACTGACGGAGTCGCTAcaacagaaactgaaaacattcTCCGAGCTGTCTTCGCCGAATTTGTCCATCTGCGACGCAAATTTATCATACAAGGAGAATGTAAAAGAAGACGATAATGCAAAGTTAGAAGGCTGTGATAAAGAAGCGGGTGGAGGAGACCCGAAAACCGACGAGGCTGCACCGGTCTTGACTGACGACAGGGCACAGGAACTCGCCGTCACCGGGTCGGAAGGGGAACGGAAGGACGCGGGTCTGGATCACGTTCAGGACGACTATGACGTCCAAGTACTCCATGACGGAAGGCACACGAGCTTCGTGAAaaatgacaacaacaacaataataataacgGTCTACCGGAGGAGGCGAAACAAGGAGACCCAATCGTGAAGACCCACGGGTGTCAGGACTGCGGGAAATGCTTTTCCCGGCGCCAGCTGCTGGTCCAGCACCGACGCATCCACACGGGAGAACGTCCATATTCGTGTGCCGAGTGCGGACGTCAGTTCACCCAGCGCGGCCACTGGAGCACGCACCAGAAGCTGCACGAGCCCGCTCGCAGACCCGAACACGCGTGTCCGAGCTGCGGGAAAGCCTTCGTCACTCGCGCCTCGCTCAAGGTTCACCTCAGGACCCACACCGGGGAAAAGCCGTTCCAGTGTGGTGAGTGCGGGAAACAGTTCAGCCAACTGCGCAATTACAAGTACCACCGCTCCGTTCACGAGGGCACTCGGGAGTTCGCGGCTTCGTGTCCCGAGTGTGGCAAATACTTCAACGACCGCGGTTACCTGAGCTCGCACATGAAGATTCATAGAAATCGGAAGGAATACGGGTGTCAGTTCTGCGGCAAGAGCTTCAACCAGCGGGTGGCCTACAACATGCACGTGAGGATTCACACAGGCGAACGTCCTCACTCGTGCCCGCATTGCAGCAAGACCTTCTCGCGCAAGATGCTCCTTAAGCAACACTTGCGTATCCACACTGGTGAGAAGCCGTTCGCGTGCAGCGTGTGCGGAAAAGCCTTCGCCGACAGAAGTAACATGACACTGCACATGCGACTGCATTCCGGGATCAAGCCGTACTCCTGTCAGCTGTGCGCCAAGGCCTTCACGAAGAAACATCACCTCAAGACGCACTTGAACTACCACACTGGAACCAAACCGTACTCATGCGGCAAATGTGGGCTACGATTCAGCCAGTCAAGTAATATGAGGACTCATTACAAGAAATGCGCGGGTTCGGGGCTCATGACCCTCGAGGCGCCTGTGGGCAAGACCGAGGAGGCTACCGCGACGCCGGGCACGAACAACAACGGCGCTGTCTCCCCACCGTCTTCACCCAGTCGAAGTGACGCCACGATGACGTCACCAGAGACATTATCAGCTCCTCCCCATTCGAATAATTCGTCTTGTGTCACTTCCGTTCTGCCAAGGAATGCGGTTCACGCACCACTGCCCGTCTGA
Protein Sequence: MSANNLEVRWKHHQEGVMDYLRQLLVSEVFVDVTLCCQNKRFKAHRILLSSCSSYLQQVLTEHVVSDHVTIILPDIHPDDMQWLLDFMYTGSVAVPRSRLSSFLQAAEALNIKILTDVAQLQKTTDSSCVVSSPVLVFKLTKDPNFRKHPINPNTDTCIIKPHSLTEDCKNSSCKDDAKIRSDSSKLVTDKEDFKTVTEDSKSCVFMCSSDVSSYVPKRFQSPIDSHSISCKTMTYNAEIRNSTSLGHPSEKPSARLETPVHNTSPCDAKNAAGNFNIDNSSSICIGNKPQADRECNDKELPSEEHFSSPEYGFKLNNRVIPSSISPVYRHDTGVIDLPLRHRPENAEHCTLNPQRLSQWPKPLPSLMPLNNRTWYNGQVPACYLGKDCTVNGALQLDRKDTFPGHLQSMKDIVPNSKTRTRSMEVDQHLPNEHRHVKNVWFYGTDKVLHHNGQTPVADCRPSRRPSHRVPRLCPIVPPSPWAQHHRPPCATPVACPPIAMNYPAISWTVPPVHVAVDQQPTPLLARPDNQQRPSDTARPHASIKAAKLSPPPQSSDKSPDETTPLRRRPSESAAMFCKLKSRRLEEFYREETARQLRSGSSEEEVASDLSTKSPQSPVRSTHLNSSRGTPEYRKVTSSPLTESLQQKLKTFSELSSPNLSICDANLSYKENVKEDDNAKLEGCDKEAGGGDPKTDEAAPVLTDDRAQELAVTGSEGERKDAGLDHVQDDYDVQVLHDGRHTSFVKNDNNNNNNNGLPEEAKQGDPIVKTHGCQDCGKCFSRRQLLVQHRRIHTGERPYSCAECGRQFTQRGHWSTHQKLHEPARRPEHACPSCGKAFVTRASLKVHLRTHTGEKPFQCGECGKQFSQLRNYKYHRSVHEGTREFAASCPECGKYFNDRGYLSSHMKIHRNRKEYGCQFCGKSFNQRVAYNMHVRIHTGERPHSCPHCSKTFSRKMLLKQHLRIHTGEKPFACSVCGKAFADRSNMTLHMRLHSGIKPYSCQLCAKAFTKKHHLKTHLNYHTGTKPYSCGKCGLRFSQSSNMRTHYKKCAGSGLMTLEAPVGKTEEATATPGTNNNGAVSPPSSPSRSDATMTSPETLSAPPHSNNSSCVTSVLPRNAVHAPLPV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01567103;
90% Identity: iTF_01567103;
80% Identity: iTF_01567103;