Znev007835.1
Basic Information
- Insect
- Zootermopsis nevadensis
- Gene Symbol
- RCOR3
- Assembly
- GCA_000696155.1
- Location
- NW:1208445-1234454[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.2 1.8e+03 -1.5 0.0 25 41 47 66 40 68 0.75 2 3 1.1e-09 6e-07 28.8 0.0 3 46 127 170 125 170 0.97 3 3 5.9e-13 3.4e-10 39.3 0.0 3 46 383 426 382 426 0.98
Sequence Information
- Coding Sequence
- ATGGTTCTAGCAGAAAGAAATTCAGATAATGTTAGAAATGGACGGAGATCCAGAGGACCAAGCCCAAATGGTCATGCATCCGAGTCCAGTAGCGAAGAGGAAGGTGAAGAAAAGATAAGAGTTGGGAGGGACTATCAAGCTGTTGTGCCTGAACTGATACCTCTGTCagaaCGTCGTCCTGAACAGTGTGGAGAACGGGCTCTTCTGGTTTGGTCACCAACAACAGATATACCTGATTATAAATTGGATGAATATATATCACTAGCAAAGGAGAAGTATGGCTACAATGGAGAGCAGGCACTTGGGATGCTGTTCTGGCACAAACATGACCTTGAAAGGGCAATATTGGATCTTGGCAACTTTACTCCATTCCCAGATGAATGGACAGTTGAGGACAAAGTTTTATTTGAGCAAGCTTTTCAGTTTCATGGGAAAAGCTTTCATAGGATTAGGCAAATGCTGCCAGACAAATCTATAGCAAGTCTAGTGAAGTACTATTATTCATGGAAGAAAACACGGAGTCGAACAAGTTTGATGGACCGACAAGCAAGGAAACTGGCTGTCCATCGTGAGGAAGGCAGTGAAGGAGGATCAGAACTAGGTTCCAACACTGACTCGGATTCTGATGAGAAGaaatggACAATTCACCGAGGCATTCGTCGTAAGAGTGGTTCACCTCCAAGGCCAGCTCAGAATAATGATGAATCTGGTAGTCAGAAAGATGGTGCGGAGGGTGGGAAGAGTTCTTGTGCTAACTGTGGGGTTGCCTGCACTCACACCCACACTTCTCCTAAAGGCAGCATGTGCAACACTTGCTACCAACATTGGAGACGCACAGGCAGTGTCCGTCCAACAACCGGTCCGGTGAAGCGCGATAGACACTGTCACGTTCTTCTCCGCCACAAACGCAAGCCCCCCCGAGGGATGTACATTAACCACGATGATCTGGTGGCTATGGCTGCCGGGCCGCCAGCACCTGCCCCTGCCAGTCAGGGTGACCAAATGTTGAAAGCAATGGATAGGGAAATTATTTCCCTTAAGAGACAAGTGCAGAATAACAAACAAAGTCTGAGTTCTTTCAAGAGAAAAACTGCTGAGGGGATTGACGATTTACGCCCACCAGATTCAAACAACCGTATCAATGCTCGCTGGACCAATGATGAATTATTGTTAGCTGTGCAAGGTGTACGTAAGTATGGAAAGGATTTTCGAGCCATTGCAGAGGTAATTGGCACCAAGACAGAAGCTcacttacgtagtttcttcgTTAACTATCGTCGCCGTTATAACTTGGATGCTGTGTTGAAGGAATTTGAAGCAGAGAATGGACCTATTGTTGACAGTGATGACAAAGAGGAAAAGATGGAGACAGATGGTGTGTCTTCTGGTAGTGAAGCCAGCACGCCTACTCCTGGGGGTAGCTCCCCTGTTACAGTGGCTCCTGGGTCTCCACCGCTTATCAAGCAGCCGTTTCCCAAGACCACTGTTGGAACAGGTCTTGCTGCTAAATGA
- Protein Sequence
- MVLAERNSDNVRNGRRSRGPSPNGHASESSSEEEGEEKIRVGRDYQAVVPELIPLSERRPEQCGERALLVWSPTTDIPDYKLDEYISLAKEKYGYNGEQALGMLFWHKHDLERAILDLGNFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDRQARKLAVHREEGSEGGSELGSNTDSDSDEKKWTIHRGIRRKSGSPPRPAQNNDESGSQKDGAEGGKSSCANCGVACTHTHTSPKGSMCNTCYQHWRRTGSVRPTTGPVKRDRHCHVLLRHKRKPPRGMYINHDDLVAMAAGPPAPAPASQGDQMLKAMDREIISLKRQVQNNKQSLSSFKRKTAEGIDDLRPPDSNNRINARWTNDELLLAVQGVRKYGKDFRAIAEVIGTKTEAHLRSFFVNYRRRYNLDAVLKEFEAENGPIVDSDDKEEKMETDGVSSGSEASTPTPGGSSPVTVAPGSPPLIKQPFPKTTVGTGLAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995150;
- 90% Identity
- iTF_01410730;
- 80% Identity
- -