Znev005733.1
Basic Information
- Insect
- Zootermopsis nevadensis
- Gene Symbol
- lolal
- Assembly
- GCA_000696155.1
- Location
- NW:187695-199577[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.2e-11 1.4e-07 30.5 0.1 1 41 249 290 249 292 0.90
Sequence Information
- Coding Sequence
- ATGTCAGACCTGTGGCTGAAATGGAATAGTCATCTGGAGCTTTTGGGTTCCTTGGATAATTTGCTTGAGACCGAGAGTTTTGTGGATGTAACTATTGCTGTAGAGGGACGGCTACTTAAAGCTCACCGCATTGTCCTGTGTGCCAGTAGttcataTTTGAACTCCATTCTGCGATCTAATACAACACCGCACCCCATAATATTCATGAGAGATGTAAAATACCTGGAAATGAAAGCAATTTTAGACTTTATTTATAAAGGAGAAGCGTATGTAtcacaagaaaatattcaagGAGTTCTGAAaactgcagaagcacttaaagtAACAGGATTGTCCAGCATTTCATGGACAGAATCTTCAGTGAACTGTGTGCAGGTAGATAGGGCTTCACAGTGTGATATACCAGACCACCAAGCTGAATCAGAACCTGCTGACAACTTGAATGCACAAAAGGAAGCACAAGAGATGTTGCCAATACTGAATGACAGTTCACTgtcaaattcttcaaaatatcaTAGCTCAgaggaaagaaaggaagaaacagaGGAAGATGCTGATATTGGTGCAGCTGTTCAGGAAGATGGGGGGCAGTTAACTGAGaACTATGAAGAGGCAGCAAAAGTGACACATATGTCAGCATCTGAGGATGGTGAGACATTGATGATACTGGAAGCACCACCTAATATATCAATTGCCTCTGTTCCTTCTCTACCAGCAAGACATAAGCCAATAGGGAGACAGTACTCTAATGAGGATCTTCAGCATGCCTTGGAACTGATACGTCAGGGTCGTTTGGGAATCAAACCAGCAGCTAGAGCATTTAACATACCTGCAGCTACTTTGCATCATGCAGCACGGAGAAGGAAGATTTCAAGTCCGATGCAACAAGGTGGAAATCATGTCCCATCACATCGCAACAGAATATACCCTGCCAGCTGA
- Protein Sequence
- MSDLWLKWNSHLELLGSLDNLLETESFVDVTIAVEGRLLKAHRIVLCASSSYLNSILRSNTTPHPIIFMRDVKYLEMKAILDFIYKGEAYVSQENIQGVLKTAEALKVTGLSSISWTESSVNCVQVDRASQCDIPDHQAESEPADNLNAQKEAQEMLPILNDSSLSNSSKYHSSEERKEETEEDADIGAAVQEDGGQLTENYEEAAKVTHMSASEDGETLMILEAPPNISIASVPSLPARHKPIGRQYSNEDLQHALELIRQGRLGIKPAARAFNIPAATLHHAARRRKISSPMQQGGNHVPSHRNRIYPAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01567101;
- 90% Identity
- iTF_01567101;
- 80% Identity
- iTF_01567101;