Basic Information

Insect: Zonitis immaculata
Gene Symbol: -
Assembly: GCA_037414775.1
Location: JAZBGX010001623.1:13324-16745[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.013 0.73 10.1 1.2 3 23 55 76 54 76 0.96

2 25 0.00082 0.047 13.9 0.1 1 23 81 103 81 103 0.98

3 25 1.9 1.1e+02 3.3 1.6 2 23 110 131 109 131 0.95

4 25 0.0016 0.093 12.9 1.2 1 23 137 159 137 159 0.98

5 25 0.00016 0.009 16.1 5.4 1 23 165 188 165 188 0.95

6 25 2.4e-05 0.0014 18.7 3.9 1 23 199 222 199 222 0.95

7 25 0.00012 0.0069 16.5 0.3 3 23 232 252 231 252 0.98

8 25 0.0066 0.38 11.0 1.0 1 23 298 321 298 321 0.94

9 25 0.019 1.1 9.6 2.3 1 23 355 378 355 378 0.96

10 25 0.007 0.4 10.9 0.5 1 23 379 402 379 402 0.86

11 25 1.5e-05 0.00087 19.3 2.5 2 23 409 431 408 431 0.96

12 25 0.0067 0.39 11.0 1.3 1 23 461 483 461 483 0.98

13 25 4.7e-06 0.00027 20.9 2.4 3 23 491 511 490 511 0.99

14 25 6.5e-07 3.7e-05 23.6 0.8 1 23 517 539 517 539 0.99

15 25 1.7e-06 9.6e-05 22.3 0.7 1 23 545 567 545 567 0.98

16 25 0.069 4 7.8 0.5 1 23 604 627 604 627 0.94

17 25 0.0031 0.18 12.1 0.4 1 23 655 678 655 678 0.97

18 25 1.2 69 3.9 5.7 1 23 710 733 710 733 0.96

19 25 0.037 2.1 8.7 0.8 1 19 739 757 739 761 0.85

20 25 0.02 1.2 9.5 1.4 1 23 767 790 767 790 0.92

21 25 0.00033 0.019 15.1 0.5 2 23 802 824 801 824 0.96

22 25 0.00034 0.02 15.1 0.7 3 23 837 857 835 857 0.96

23 25 4.4e-06 0.00026 21.0 2.3 1 23 863 885 863 885 0.99

24 25 5.4e-07 3.1e-05 23.9 1.2 1 23 891 913 891 913 0.98

25 25 0.00025 0.014 15.5 0.2 1 21 919 939 919 940 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.013	0.73	10.1	1.2	3	23	55	76	54	76	0.96
2	25	0.00082	0.047	13.9	0.1	1	23	81	103	81	103	0.98
3	25	1.9	1.1e+02	3.3	1.6	2	23	110	131	109	131	0.95
4	25	0.0016	0.093	12.9	1.2	1	23	137	159	137	159	0.98
5	25	0.00016	0.009	16.1	5.4	1	23	165	188	165	188	0.95
6	25	2.4e-05	0.0014	18.7	3.9	1	23	199	222	199	222	0.95
7	25	0.00012	0.0069	16.5	0.3	3	23	232	252	231	252	0.98
8	25	0.0066	0.38	11.0	1.0	1	23	298	321	298	321	0.94
9	25	0.019	1.1	9.6	2.3	1	23	355	378	355	378	0.96
10	25	0.007	0.4	10.9	0.5	1	23	379	402	379	402	0.86
11	25	1.5e-05	0.00087	19.3	2.5	2	23	409	431	408	431	0.96
12	25	0.0067	0.39	11.0	1.3	1	23	461	483	461	483	0.98
13	25	4.7e-06	0.00027	20.9	2.4	3	23	491	511	490	511	0.99
14	25	6.5e-07	3.7e-05	23.6	0.8	1	23	517	539	517	539	0.99
15	25	1.7e-06	9.6e-05	22.3	0.7	1	23	545	567	545	567	0.98
16	25	0.069	4	7.8	0.5	1	23	604	627	604	627	0.94
17	25	0.0031	0.18	12.1	0.4	1	23	655	678	655	678	0.97
18	25	1.2	69	3.9	5.7	1	23	710	733	710	733	0.96
19	25	0.037	2.1	8.7	0.8	1	19	739	757	739	761	0.85
20	25	0.02	1.2	9.5	1.4	1	23	767	790	767	790	0.92
21	25	0.00033	0.019	15.1	0.5	2	23	802	824	801	824	0.96
22	25	0.00034	0.02	15.1	0.7	3	23	837	857	835	857	0.96
23	25	4.4e-06	0.00026	21.0	2.3	1	23	863	885	863	885	0.99
24	25	5.4e-07	3.1e-05	23.9	1.2	1	23	891	913	891	913	0.98
25	25	0.00025	0.014	15.5	0.2	1	21	919	939	919	940	0.95

Sequence Information

Coding Sequence: ATGAGAAATGATAGTGAAGTTGTAATATTGGAAGAGATTCGTTTCGATATAATCGATGGAAATAGATTGTGTGATGAGAAACATTCAGTTTTATGTCAATATTgtggttgttttattaaaaaatatcaatatctGAATCATGAAAAATTGCATGGTAATTGTTGTGAGATTTGTCCAGCTAGATTTCAAACAATCGAAGATTTAAACAACCACCGAACTACCAACCATAACGGTATAATTTATGAATGCGATAAATGTCCATTGACATTTCCAATGCCATTCGATTTAGTTCTACATAAACGCGAACATAATGGACTATCAACAGTTAGTTGTTATAAATGTCGCTTTTCAACGcaaaatttgttatcaatgCAAGAACATTTACGTCGACATCAAACaccatataattataaatgtaatttgtGTTCGAAAACATTTTTGAAACGTATCCAATTGATTGCCCATAGAGACACCCATCAAACAATACCAAAGTATTGTTGTGAATTTTGTGATAAGAAATTCACAACACAACGTTATTTGAACAATCATCGTATGTTGAATCATTCAAAAGACATAAACGgtattgaaaatcaatatttatgttCACAATGTGGTcgttgtttcaaatttaaagTTAGCTTAAAACGACATTTAAGTACAATACATGGTATTGGTGGATGTCGTAAAGTTGCATGTCAATTGTGCAATAAAATTCTAGCTAATTCGTATGGTTTGAAGATGCATATGCGTACACATACCGaaATTGATGGTAATCTTGCTAGTGGTGTGGATTTAGtttcaaaaatagaaattgataatgaaacgAATCTAATTGCTGATAGTGCTGATTTCGATTCGAAACCTTTTGGCAATAATGCAAATGTGAAcgtttatatttgttatatttgttcAACTCAATTTAAAGATAAATCGCAAATTGAGGAGCATTTCAAAGAGAATCATCCGACAAAATTCAGTTGTATCGAATGCAATCAAATATTCGATGATGCCTATGATTACTGTTGtcacaatcaacaacaacaacacaacaacgaTCATCTGTATTGTTGTCCGATTTGTCCGTATTCGACGAAACGTCGACCATGCATTGCGACGCATATCAAACAGATACATTATCGTTgtaatatttgcaataaagGCTTTACATCTGGTCAAGTCTATGAAGAACATAAAAATCTACTACATACTGATGATGTACAATTAGAATGTGAAATTTGTAGTAAAACGTTCTCTAATACACGCTATTTGAATCGGCATAAGAGAAGGAGACACTCCGTTAGAGAATCATCACCGTCGTCATCATCAGCTTCATACACACCATCTGTATCgtcgtcgtcatcatcatcatcgactaAAGTGTATCAATGTAGAATATGTTCGAAACAACTTGCAAATAGAAAAAGTTTCCTAGTACATAAACGCGGTCATACCGGTAAAGGTACCGTTTTATGTGACATATGCGgtaaaaaattgacaaatgcTCAACATTTAAAACGACATCTACGTACACATACCGGCGATAGACCGTATGTATGTAAGATATGTGATAAGAAATTTGCAACAACGAGTACATTAATATCACATGAACGGACACATAGCGGTGAGAAACCGTATGTTTGTAAGACATGCGGTAAAGGTTTTTCACAACGTTCAACGTTAGTTATACACGAACGTTATCATACTGGCGAACGGCCgaCGGCGAAGAAGTTGAGAAAACGCCGGAAAATTCAAGATGACAAGAGTGTTGTTGAGTGTGGGAAAATCAAAAAAGTAAAATCGTCACGTATCTATACATGTCCGAAatgtttattagaatttccgaaaaggaaattattagatattcacaataaaaatgatcatgatgatgatgatgatgatgatgttgacgataatgataatgatgattcgAAGAATTTCAAGTACGACGAAAATAGCGAAGTTTATATTTGCAATATATGTTCGGCTGAATTTCAAGATAAATCCGAAACGGAGCAACATTTGAAAAGGAACCATTCGGAGAAATTCGGTTGTATCGAATGCAATCTAACATTCGACGATGCGTACGTTTATTGTTGTCACAATCAACAGCATAACAAAGaccaattgttttgttgtccGTTTTGTTCGTATTCAACGAAACGTCGACCATGTATATCGACCCATATCAATCGTATGCATTAccataaattctattataattgcaAGACTTGCGGTAAAGGTTTCAATGATTTGTCGATATTTAAAGAACACGATAATGAACATTTAGGCATAAAACCGTTCGTTTGTGTCGTTTGCGATAAGTCCTTTGTATTCTCACGTTATCTGTATTTCCATCAGATCCGTTATCATACTGTCGGTATTGAGGGACAAATCAAAAGGAATCAATGTtcgatttgtttgaaaatattcgCCAAACAATCAACATTGATCAATCATTTAGCGAAACGACATACGAAATCACAATTGCCACGCGAACGGCGACATTTATGCGATGTGTGCGGCAAACGATTTGCCGCCaaagataaatatataatacattATCGTATACATACCGGTGATAAGccatataaatgtaaatattgtacGAAGAGTTTCATCAAAAAAGATTACTTGATTATGCACGAACGTGTACATACTGGTGAGAAACCATATTCATGTCAATATTGTGGGAAATGCTTCAATCAGGCAGCACCGTTGCGTATACATATACGTAGTCATACTGGTGAACGGCCgtatgtttgtaatttttgtaatacagGTTTTACATCGAAAGGTGCATTGAATATGCATAGGAAAGTTTGTACAGGATCTACCaattaa
Protein Sequence: MRNDSEVVILEEIRFDIIDGNRLCDEKHSVLCQYCGCFIKKYQYLNHEKLHGNCCEICPARFQTIEDLNNHRTTNHNGIIYECDKCPLTFPMPFDLVLHKREHNGLSTVSCYKCRFSTQNLLSMQEHLRRHQTPYNYKCNLCSKTFLKRIQLIAHRDTHQTIPKYCCEFCDKKFTTQRYLNNHRMLNHSKDINGIENQYLCSQCGRCFKFKVSLKRHLSTIHGIGGCRKVACQLCNKILANSYGLKMHMRTHTEIDGNLASGVDLVSKIEIDNETNLIADSADFDSKPFGNNANVNVYICYICSTQFKDKSQIEEHFKENHPTKFSCIECNQIFDDAYDYCCHNQQQQHNNDHLYCCPICPYSTKRRPCIATHIKQIHYRCNICNKGFTSGQVYEEHKNLLHTDDVQLECEICSKTFSNTRYLNRHKRRRHSVRESSPSSSSASYTPSVSSSSSSSSTKVYQCRICSKQLANRKSFLVHKRGHTGKGTVLCDICGKKLTNAQHLKRHLRTHTGDRPYVCKICDKKFATTSTLISHERTHSGEKPYVCKTCGKGFSQRSTLVIHERYHTGERPTAKKLRKRRKIQDDKSVVECGKIKKVKSSRIYTCPKCLLEFPKRKLLDIHNKNDHDDDDDDDVDDNDNDDSKNFKYDENSEVYICNICSAEFQDKSETEQHLKRNHSEKFGCIECNLTFDDAYVYCCHNQQHNKDQLFCCPFCSYSTKRRPCISTHINRMHYHKFYYNCKTCGKGFNDLSIFKEHDNEHLGIKPFVCVVCDKSFVFSRYLYFHQIRYHTVGIEGQIKRNQCSICLKIFAKQSTLINHLAKRHTKSQLPRERRHLCDVCGKRFAAKDKYIIHYRIHTGDKPYKCKYCTKSFIKKDYLIMHERVHTGEKPYSCQYCGKCFNQAAPLRIHIRSHTGERPYVCNFCNTGFTSKGALNMHRKVCTGSTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -