Basic Information

Insect: Zonitis immaculata
Gene Symbol: -
Assembly: GCA_037414775.1
Location: JAZBGX010007005.1:18-3004[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 4.2 2.4e+02 2.2 0.6 1 10 10 19 10 24 0.80

2 20 0.00033 0.019 15.1 1.0 1 23 32 55 32 55 0.94

3 20 2.2e-07 1.3e-05 25.1 1.1 1 23 61 83 61 83 0.99

4 20 5.5e-05 0.0032 17.6 4.0 1 23 90 112 90 112 0.98

5 20 2.3e-05 0.0013 18.8 2.2 1 23 118 141 118 141 0.97

6 20 9e-06 0.00052 20.0 2.9 1 23 145 167 145 167 0.98

7 20 0.00015 0.0084 16.2 3.0 1 23 177 200 177 200 0.97

8 20 0.00031 0.018 15.2 0.2 1 23 207 229 207 229 0.98

9 20 1.9e-07 1.1e-05 25.3 1.0 1 23 235 257 235 257 0.98

10 20 0.027 1.5 9.1 0.6 1 13 263 275 263 277 0.90

11 20 0.0045 0.26 11.6 3.0 1 23 281 304 281 304 0.96

12 20 6.8e-06 0.00039 20.4 0.4 1 23 310 332 310 332 0.99

13 20 9.7e-05 0.0056 16.8 2.4 1 23 338 360 338 360 0.98

14 20 0.0003 0.017 15.3 0.3 1 23 366 389 366 389 0.92

15 20 0.0021 0.12 12.6 4.1 1 23 393 415 393 415 0.98

16 20 3.3e-05 0.0019 18.3 4.3 1 23 425 448 425 448 0.98

17 20 4.9 2.8e+02 2.0 1.4 1 19 455 473 455 477 0.70

18 20 1.6e-07 8.9e-06 25.6 1.9 2 23 484 505 484 505 0.98

19 20 5.8e-07 3.3e-05 23.8 3.3 1 23 511 533 511 533 0.97

20 20 0.0024 0.14 12.4 1.8 1 23 539 562 539 562 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	4.2	2.4e+02	2.2	0.6	1	10	10	19	10	24	0.80
2	20	0.00033	0.019	15.1	1.0	1	23	32	55	32	55	0.94
3	20	2.2e-07	1.3e-05	25.1	1.1	1	23	61	83	61	83	0.99
4	20	5.5e-05	0.0032	17.6	4.0	1	23	90	112	90	112	0.98
5	20	2.3e-05	0.0013	18.8	2.2	1	23	118	141	118	141	0.97
6	20	9e-06	0.00052	20.0	2.9	1	23	145	167	145	167	0.98
7	20	0.00015	0.0084	16.2	3.0	1	23	177	200	177	200	0.97
8	20	0.00031	0.018	15.2	0.2	1	23	207	229	207	229	0.98
9	20	1.9e-07	1.1e-05	25.3	1.0	1	23	235	257	235	257	0.98
10	20	0.027	1.5	9.1	0.6	1	13	263	275	263	277	0.90
11	20	0.0045	0.26	11.6	3.0	1	23	281	304	281	304	0.96
12	20	6.8e-06	0.00039	20.4	0.4	1	23	310	332	310	332	0.99
13	20	9.7e-05	0.0056	16.8	2.4	1	23	338	360	338	360	0.98
14	20	0.0003	0.017	15.3	0.3	1	23	366	389	366	389	0.92
15	20	0.0021	0.12	12.6	4.1	1	23	393	415	393	415	0.98
16	20	3.3e-05	0.0019	18.3	4.3	1	23	425	448	425	448	0.98
17	20	4.9	2.8e+02	2.0	1.4	1	19	455	473	455	477	0.70
18	20	1.6e-07	8.9e-06	25.6	1.9	2	23	484	505	484	505	0.98
19	20	5.8e-07	3.3e-05	23.8	3.3	1	23	511	533	511	533	0.97
20	20	0.0024	0.14	12.4	1.8	1	23	539	562	539	562	0.97

Sequence Information

Coding Sequence: ATGCATGAGAGTCGACATAATGAACGATTCCAATGTCACATTTGTCGCAGTTACTTCCCGTCAGAATGGTATCAACAAACAACTGGTGGTACCTACCAGTGTCTTCAATGTTCAAAAACTTTTATTGCTCGCAATAAATTGAACCGACATATATTATTTGTACATACCGACAATCGTCCATATCAATGTGAATCGTGTACGAAATCGTTCAAAAATCCCGACTCATTAAAAGTACATCAATTAACACACGATAGTTCACTGATGCGATTCGAATGTGATGTGTGCCAAAAGAAATTCTCACGAGAATGCTCTTTGAATTACCATCTAAAGAGTCATTcgaatattttcgattataattgcGACATTTGCGGTAAAGGATTCCAAAGGAATTTCAAATACAAGGAGCATATGAAAAGTAAACACGAAAATACGTATAGTTGTGATATTTGCGGTAAATGTTTGAATAGTAAATCCAGTTTGGCGACGCACAAGAAACGCCACGAGCAAAATTACGCCGACAATCGTAATTTCAAATGTCAATTTTGTTCGAAGACATTCATCGAACAGATGTATTTGAAGAAACATGTACAACGGATGCACGACGATAATCGACAGAAATATATTTGTGATTTGTGCGGTAAAGAAATTGCATCGTTACGAAGTTTGAGGGAACATCGCAATACacatttgaatttgaaatcgTTCGAATGTGGTGATTGTGATAAGAAATTTGCCAAGAAAAGTCTACTAACTATACATACCCGGACGCATACCGGCGAAAAACCGTACAGTTGTAATCTATGTGGAAAATCGTATTATCAAAAAACAGCTGATGGTGGCTATCAATGTCTTCAATGTTTGCGAGTTTTCAAAAAACgtaataaattcaatcgaCATGCCAAATATGTCCATACCGACAATCGCCCGTATCAATGTAAATTGTGTCCGAAAGCGTTCAAACAAGCGGGTGTTCTAAAACTACATGAACGTCGTCATGataaaacattgaaatttgaatgCGATATTTGCACGAAGAAATTCGATTCGAAATATACATTGGGAAGTCATAAAAAACGTCATACGACTATagcgaattattattgtgaaatttgcGGTGCAGGCTTCTCCATGAAAATGGATTACAAACGACACTTGGATGCTAAACATAATAAAGTGTTTTCGTGTGATGTTTGTGGTAGATGTTTGTCTGATGGACATTCATTGAAATTGCACAAGAAACGACACGAAGAGAATTATACGGAGAAACGtaatttcaaatgtgaattctGTACGAAATCATTCATGCAAGAATTCCATTTGAGAATCCATATTCGACGGATGCACAACGATAATCGACTGAAATATATTTGCGAGCTATGTGGTAAAGAGATGCTGAGTTTGGATAGTTTTAAAAATCATTGTAAACTTCATGCCGGTATTAAATCGAACGAATGCGAGACATGCGGGAAgaaatttacgaaaaaaagTTCATTAACGGTACATTTACGTACACATACTGGTGCGAAACCGCATAGTTGTCATATTTGTGGTAAAACATTCTCGCAACGTAGTCCGTTAGTGATACATTTACGTAAACATACCGGGGAAAAACCGTACAGTTGCGATATTTGTCCAGAGAAGTTTGTTAGTAAGCACGACAAAGATATTCATTTGAAGAAGAAACACCAAATTTTGTAG
Protein Sequence: MHESRHNERFQCHICRSYFPSEWYQQTTGGTYQCLQCSKTFIARNKLNRHILFVHTDNRPYQCESCTKSFKNPDSLKVHQLTHDSSLMRFECDVCQKKFSRECSLNYHLKSHSNIFDYNCDICGKGFQRNFKYKEHMKSKHENTYSCDICGKCLNSKSSLATHKKRHEQNYADNRNFKCQFCSKTFIEQMYLKKHVQRMHDDNRQKYICDLCGKEIASLRSLREHRNTHLNLKSFECGDCDKKFAKKSLLTIHTRTHTGEKPYSCNLCGKSYYQKTADGGYQCLQCLRVFKKRNKFNRHAKYVHTDNRPYQCKLCPKAFKQAGVLKLHERRHDKTLKFECDICTKKFDSKYTLGSHKKRHTTIANYYCEICGAGFSMKMDYKRHLDAKHNKVFSCDVCGRCLSDGHSLKLHKKRHEENYTEKRNFKCEFCTKSFMQEFHLRIHIRRMHNDNRLKYICELCGKEMLSLDSFKNHCKLHAGIKSNECETCGKKFTKKSSLTVHLRTHTGAKPHSCHICGKTFSQRSPLVIHLRKHTGEKPYSCDICPEKFVSKHDKDIHLKKKHQIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -