Basic Information

Insect: Zonitis immaculata
Gene Symbol: -
Assembly: GCA_037414775.1
Location: JAZBGX010000273.1:4138-7568[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 9.7e-06 0.00056 19.9 1.6 1 23 148 170 148 170 0.98

2 16 0.00036 0.021 15.0 7.4 2 23 177 198 177 198 0.98

3 16 3.9e-05 0.0023 18.0 1.4 1 23 208 230 208 230 0.97

4 16 0.0007 0.04 14.1 1.5 1 23 291 313 291 313 0.99

5 16 8.7e-06 0.0005 20.1 5.5 2 23 320 341 319 341 0.98

6 16 9.4e-05 0.0054 16.8 4.5 2 23 358 380 357 380 0.97

7 16 0.00015 0.0086 16.2 3.6 1 23 488 510 488 510 0.95

8 16 0.00025 0.014 15.5 1.1 1 23 516 539 516 539 0.93

9 16 1.5e-06 8.8e-05 22.5 0.8 1 23 544 566 544 566 0.98

10 16 3e-07 1.7e-05 24.7 1.6 2 23 577 598 576 598 0.96

11 16 4.8e-08 2.8e-06 27.2 1.4 1 23 605 627 605 627 0.98

12 16 2.3e-05 0.0013 18.8 1.6 3 23 639 659 637 659 0.92

13 16 0.00014 0.0081 16.3 5.1 1 23 665 687 665 687 0.99

14 16 1.6e-05 0.00095 19.2 4.0 1 23 693 715 693 715 0.98

15 16 5.7e-08 3.3e-06 27.0 0.2 1 23 721 743 721 743 0.99

16 16 0.00018 0.011 15.9 0.1 1 23 749 773 749 773 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	9.7e-06	0.00056	19.9	1.6	1	23	148	170	148	170	0.98
2	16	0.00036	0.021	15.0	7.4	2	23	177	198	177	198	0.98
3	16	3.9e-05	0.0023	18.0	1.4	1	23	208	230	208	230	0.97
4	16	0.0007	0.04	14.1	1.5	1	23	291	313	291	313	0.99
5	16	8.7e-06	0.0005	20.1	5.5	2	23	320	341	319	341	0.98
6	16	9.4e-05	0.0054	16.8	4.5	2	23	358	380	357	380	0.97
7	16	0.00015	0.0086	16.2	3.6	1	23	488	510	488	510	0.95
8	16	0.00025	0.014	15.5	1.1	1	23	516	539	516	539	0.93
9	16	1.5e-06	8.8e-05	22.5	0.8	1	23	544	566	544	566	0.98
10	16	3e-07	1.7e-05	24.7	1.6	2	23	577	598	576	598	0.96
11	16	4.8e-08	2.8e-06	27.2	1.4	1	23	605	627	605	627	0.98
12	16	2.3e-05	0.0013	18.8	1.6	3	23	639	659	637	659	0.92
13	16	0.00014	0.0081	16.3	5.1	1	23	665	687	665	687	0.99
14	16	1.6e-05	0.00095	19.2	4.0	1	23	693	715	693	715	0.98
15	16	5.7e-08	3.3e-06	27.0	0.2	1	23	721	743	721	743	0.99
16	16	0.00018	0.011	15.9	0.1	1	23	749	773	749	773	0.92

Sequence Information

Coding Sequence: atgATTAATAAACCAACAGAATTAGTGATCGATAAAATATGTCGTTCATGTATGTGTCAAGATGAGAATAATATGCGAAATGTATTCGAATCAAAAGAATTTTGTGGACAAACACTACAAATTGCTGAAATGTTAATGGATTGTACGTCAGTTAGTgtAACAAATACTGATGGTTTACCGAAATTATTGTGtggaaattgtgaaaataaattgaatttagctTATGAATTTCGTAAGCAATGCCAAAATTCTGATATAACATTAAgacaattaacaaatcaaaacGAATCGGTACAAGGAATCAAAGAAGAAAGTCTCGATATTGTTGTACATCCTGACTTTAATATTCCTGCATTATTTCAGgAATCGGATAGTGATgataaagatgatgatgatgatgatgataggattgataagaaaacaaaacaacaacagccagCATTTCCTTGTTCGTATTGTCAAAAAGTTTTACGTACAAAAAAAGGTCTACGTATCCATCAACGACGTCATACTGGTGAGAAATTACGACAATGCCATATGTGTAATGCCCAATTTACACGAACACATCATTTAATAAGACATATGAAGAttcattgtaaaaataataaaaccgaTACAGGTCATATATGCAGTGAATGCGGTCAATCGTTTATgaaattgtcaaatttattAGCACATAAAAAAATGCATAAATCATTAATGAAAAAGGGAAATAACAAAACGAAAACTGATGAAGAAAATGgacaaaaaccaacaacaacaacaacaacatcaacaatagttgataatgataatagcgataataatagtgataattttgaagagtatttcaaaataaaaccaaaaacaacaaaaaaagataaaGGTATATATGaatgtaaatattgtttgaaGACAATGACAACATTTGTTGGTTTAAAAATACATATGCGACGACATACTGGTTCTGATTTATCGCAATGTAAATTATGTGAGAAAACATTTACGAAAACAAGCCATTTGAAACGACATTTACAAACGCATggtataattgatattgaaaagacgaaattaattgaaaagaaaattatggaatGTGAATTTTGTGATcgtaaatttaaatataaaaaaagtttCAATCATCATATGCAAACGGAACATGGAATGTCCGATGAAAGTGATGTACCATTAAGTACGTAtgttacaaaaacaaatgatggcGGTGATGACGACGacgatgatgacgatgatgttgatgataataatgataataaaaatgaaacgaTTGGTGAATCTCGAGTGAATGAAGACGAGAATCTTGGATTGGAATCGAAGAAAGACCAAAATCACGAATCTGATACGACTGCAACTGCAATAGCAACAActaatactactactactactactaccactaccACCATTAGTGAgattcatcaacaacaaccacaacaacaatcatcgaAAAGTGGTAATCATAGAGTACATGCATGTCATGTGTGCGATGCTCAATTTGTCCGTGCCAACCATTTAACACGCCATATGACATTACATCGTGCTATATTGATACATAAATGTGATCGTTGTGATAAAGCTTATGCAACATTAGAGCATTTAGCTAAACATGTTGAAGAAGATCATATTAATAAGCCGTATGCATGTACAATATGTAATAAACCATTTAGTAGAGGTGAACATTTGATACGTCATTTGAAAGTACATCaaaatagtaatgataaaGAGGATGAATTGAATTGTTCGATATGTGAGAAAACATTTACTAGATCGGATCATTTGGCGCGACATattaaaatacatttattacAAGATAAACGGCATGTTTGTAATGAATGCGGTAAAGCATTCAATCGtttagataatttgaaaacacACCAACGAATACATACAGGCATTAAAGATACAACCAAATTACATTTATGCATTTATTGTGGtaaagaattcaataattctagTAATATGATTGTCCATATGAGACGTCATACAGGTGAACGGCCGTACAAATGCAATCAATGTGGTAAAGGTTTTCCACGATCGCACGATCTCAAATGTCACGAACGTACCCATTCTGGTGAGAAACCCTATCATTGTTCATTATGTGgcaaatcattcaataaaagCAATAAATTGTTGAGACATACACGAGTCCATACAGGTGAACGTCCTTATGTATGTAATATTTGTGGTCGGGCATTTACACAATCCAATGATTTAGCATTACATATGCGTCGTCATACTGGTGCACGTCCATATGCTTGTGGTATGTGTCCAGCACGTTTCATACAATCCGGACAATTGAAAGCGCATCGTCGTTCAACTGGACATTGGATGGAAACACAGCCCGATTTAAAAGGTGGTCATCGTGTTGAACCGGTAACAACATTAATCGAACCACAACCAATACGTTTCAAAACGCATggtaaacaaagaaaaaacgaCGATATTATgactgataataatgatgaagacATGAAAGatacgaaattattaaatcaaacaatGAATATAATGAGCGGTATCAATTTACAAGGACAATCAATCATGATGGATGCAACAAAATTAGTTGAACTACAAAATACTGGATTTATCAATTTAgttaatagtagtagtaatagttgTGCTACTAGTGTAAGTGGTAATAAtgttttgaaatataaaaatttagatggtaacgaacaatataatattagtGGACAAATTGTGAAAAGTGAAGAAAGTGTAAAAGCATCAGAGGATGATGTTAAGACATCACCAACAAAAACGGCCAATTATTCGAGAGAAACGGGCACTGTTGCGTACTCGATTGTTGGACCGTCATTTTCAACAACAGACTATAGTTATCAAAATTACGGTTAA
Protein Sequence: MINKPTELVIDKICRSCMCQDENNMRNVFESKEFCGQTLQIAEMLMDCTSVSVTNTDGLPKLLCGNCENKLNLAYEFRKQCQNSDITLRQLTNQNESVQGIKEESLDIVVHPDFNIPALFQESDSDDKDDDDDDDRIDKKTKQQQPAFPCSYCQKVLRTKKGLRIHQRRHTGEKLRQCHMCNAQFTRTHHLIRHMKIHCKNNKTDTGHICSECGQSFMKLSNLLAHKKMHKSLMKKGNNKTKTDEENGQKPTTTTTTSTIVDNDNSDNNSDNFEEYFKIKPKTTKKDKGIYECKYCLKTMTTFVGLKIHMRRHTGSDLSQCKLCEKTFTKTSHLKRHLQTHGIIDIEKTKLIEKKIMECEFCDRKFKYKKSFNHHMQTEHGMSDESDVPLSTYVTKTNDGGDDDDDDDDDVDDNNDNKNETIGESRVNEDENLGLESKKDQNHESDTTATAIATTNTTTTTTTTTTISEIHQQQPQQQSSKSGNHRVHACHVCDAQFVRANHLTRHMTLHRAILIHKCDRCDKAYATLEHLAKHVEEDHINKPYACTICNKPFSRGEHLIRHLKVHQNSNDKEDELNCSICEKTFTRSDHLARHIKIHLLQDKRHVCNECGKAFNRLDNLKTHQRIHTGIKDTTKLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCNQCGKGFPRSHDLKCHERTHSGEKPYHCSLCGKSFNKSNKLLRHTRVHTGERPYVCNICGRAFTQSNDLALHMRRHTGARPYACGMCPARFIQSGQLKAHRRSTGHWMETQPDLKGGHRVEPVTTLIEPQPIRFKTHGKQRKNDDIMTDNNDEDMKDTKLLNQTMNIMSGINLQGQSIMMDATKLVELQNTGFINLVNSSSNSCATSVSGNNVLKYKNLDGNEQYNISGQIVKSEESVKASEDDVKTSPTKTANYSRETGTVAYSIVGPSFSTTDYSYQNYG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01366495;
90% Identity: -
80% Identity: -