Basic Information

Insect: Zonitis immaculata
Gene Symbol: -
Assembly: GCA_037414775.1
Location: JAZBGX010000995.1:5879-9638[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.028 1.6 9.1 3.7 1 23 24 47 24 47 0.94

2 26 6.7e-06 0.00039 20.4 6.0 1 23 53 75 53 75 0.99

3 26 0.0022 0.13 12.5 1.5 1 23 80 102 80 102 0.99

4 26 0.0069 0.4 11.0 1.4 1 23 108 131 108 131 0.90

5 26 0.00012 0.0071 16.5 2.2 1 23 135 157 135 157 0.96

6 26 1.9e-05 0.0011 19.0 4.7 1 23 167 190 167 190 0.98

7 26 1.2e-06 6.7e-05 22.8 0.7 1 23 197 219 197 219 0.98

8 26 0.00027 0.016 15.4 6.6 3 23 246 266 244 266 0.96

9 26 5.1e-06 0.00029 20.8 4.2 1 23 272 294 272 294 0.98

10 26 0.081 4.7 7.6 1.1 1 23 300 322 300 322 0.98

11 26 0.0027 0.15 12.3 0.1 3 23 330 351 329 351 0.96

12 26 1.6e-05 0.00095 19.2 2.6 2 23 355 376 354 376 0.97

13 26 0.013 0.77 10.1 5.4 1 23 386 409 386 409 0.98

14 26 0.00034 0.019 15.1 0.7 1 23 416 438 416 438 0.98

15 26 1.5e-08 8.5e-07 28.8 1.0 1 23 444 466 444 466 0.98

16 26 1.1e-05 0.00063 19.8 0.2 1 23 472 494 472 494 0.98

17 26 0.0054 0.31 11.3 1.0 3 23 502 523 500 524 0.94

18 26 3.7e-05 0.0021 18.1 1.3 1 23 537 559 537 559 0.97

19 26 0.0021 0.12 12.6 1.1 1 23 565 587 565 587 0.99

20 26 0.012 0.68 10.2 0.2 2 23 591 613 590 613 0.92

21 26 0.00058 0.034 14.3 0.8 2 23 619 640 619 640 0.94

22 26 0.0013 0.077 13.2 2.9 1 23 650 673 650 673 0.93

23 26 0.031 1.8 8.9 0.5 1 23 680 702 680 702 0.97

24 26 3.3e-07 1.9e-05 24.6 3.4 2 23 709 730 709 730 0.98

25 26 3.9e-05 0.0023 18.0 0.3 1 23 736 758 736 758 0.98

26 26 0.00022 0.013 15.7 0.8 1 23 764 787 764 787 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.028	1.6	9.1	3.7	1	23	24	47	24	47	0.94
2	26	6.7e-06	0.00039	20.4	6.0	1	23	53	75	53	75	0.99
3	26	0.0022	0.13	12.5	1.5	1	23	80	102	80	102	0.99
4	26	0.0069	0.4	11.0	1.4	1	23	108	131	108	131	0.90
5	26	0.00012	0.0071	16.5	2.2	1	23	135	157	135	157	0.96
6	26	1.9e-05	0.0011	19.0	4.7	1	23	167	190	167	190	0.98
7	26	1.2e-06	6.7e-05	22.8	0.7	1	23	197	219	197	219	0.98
8	26	0.00027	0.016	15.4	6.6	3	23	246	266	244	266	0.96
9	26	5.1e-06	0.00029	20.8	4.2	1	23	272	294	272	294	0.98
10	26	0.081	4.7	7.6	1.1	1	23	300	322	300	322	0.98
11	26	0.0027	0.15	12.3	0.1	3	23	330	351	329	351	0.96
12	26	1.6e-05	0.00095	19.2	2.6	2	23	355	376	354	376	0.97
13	26	0.013	0.77	10.1	5.4	1	23	386	409	386	409	0.98
14	26	0.00034	0.019	15.1	0.7	1	23	416	438	416	438	0.98
15	26	1.5e-08	8.5e-07	28.8	1.0	1	23	444	466	444	466	0.98
16	26	1.1e-05	0.00063	19.8	0.2	1	23	472	494	472	494	0.98
17	26	0.0054	0.31	11.3	1.0	3	23	502	523	500	524	0.94
18	26	3.7e-05	0.0021	18.1	1.3	1	23	537	559	537	559	0.97
19	26	0.0021	0.12	12.6	1.1	1	23	565	587	565	587	0.99
20	26	0.012	0.68	10.2	0.2	2	23	591	613	590	613	0.92
21	26	0.00058	0.034	14.3	0.8	2	23	619	640	619	640	0.94
22	26	0.0013	0.077	13.2	2.9	1	23	650	673	650	673	0.93
23	26	0.031	1.8	8.9	0.5	1	23	680	702	680	702	0.97
24	26	3.3e-07	1.9e-05	24.6	3.4	2	23	709	730	709	730	0.98
25	26	3.9e-05	0.0023	18.0	0.3	1	23	736	758	736	758	0.98
26	26	0.00022	0.013	15.7	0.8	1	23	764	787	764	787	0.97

Sequence Information

Coding Sequence: ATGAGTAGTGAGCATCAGAGTAAAAGCGGAGAATGGGGTGAAGAATATGAGCTAACATGGGATGGTGCTTACCGGTGTCTTCAATGCTTCAAAGTATTCAAAAAACATGATATATTGAAacgacatttattatttgtgcATACCGAAAATCGGCCATATCAATGTAATTTGTGTACGAAATCATTTAAACACATGGACCATCTAAAAGTCCATTTGAATACACACAATAGAAAAACGTACAAATGTGAAATTtgctataaaatattatattccGAACGTTATTTCAAAATACATATGGAACGTCATTCGaacattttgaaatattcatgCGATATTTGCGGTGAAGGTTTCCCAACACATGATGATTGTCGTAAACATCGCGATGGTGAACATAACAATGCTTATTTGTGTGATATTTGCGGTATATCGTTGTGTGATAAACAATCGTTGAAGACGCATAGGCGACGACACGATAAGGATTATACGAAGCGACGCGATTTTAAATGTGAATTTTGTACGAAATCATTTATGCAAGCATTCCATTTACGAAATCATATTCGACGGATGCACAATCATAATCGACAGAAATATATTTGTGAGCTATGTGGTAAAGAATATACGACCTCTAGTAGTTTGAAATTACATCAAACTACCCATCCGAATATGAATAAGGAACTGGAAGCAAAGAACACTCTAACGACGTACCAAAAAAAGGCACCATCAAATTTGAAACATTGTCCGCATTGTACGAAAACATTTCCAAAGAAACgccaattaaaaaaacatttatttgtCCATACCGATTATCGTCCGTACACATGtgatttatgtaataaatcatttaaacGTAAAGAAACTTATACGAGACATCGTAATAATCATGATAATGCAACACATTACGAATGTGACATCTGTTTGAAACAGATCAAAACGAAATTGGGCTATTTGAGTCATAAGCGGCGTCATTTGAAAGATTTCAAAGAGATTTGTAGTATTTGTGGTAATGGTTTTATATCGACAGCTGAATATCGTTCGCATATGCTCAGTAAgcatggtaataataaatgcgATATTTGCCAGAAGACATTCTGTGATAAATATGCATTGAAGGAGCATGTGAAGTTGcacgataaaaattattatgaaaatcgCAATTATAAATGTGAATTTTGCCAAAAGAAATTCCTGCAGATGTTGCATTTGAAGAAACACATAAAACGTATGCACAACGACAATCGACAGAAGTACATATGCGATCTGTGTGGTAAAGAATTGAAAAGTCTAACTGGTTTGAAAAATCATCATAATGTCCATCAAGGTGATAAAACGCATGTTTGTCCCGATTGTGGTAAACGTTTCGTACGCAAAGATACGTTAGTTTTGCATATGCGTACGCATTCCGGTGAAAAACCGTATATTTGTCAATTGTGCGGTAAAGCTTATTCACAATTAAGTCCATTACGTATACATTTACGACAGCATTCCGGCGAGAAACCGTACGGTTGCGATATTTGCGATAAACGATTTGTTAGTAAAGGTATATTGTCGATACATTTGAAGAATAAACATCACAAATTgGATTATTGGACGGCGGCACCACGTGTGAGTTTTTTCTGTCCAATCTGCAATCGTGAATGCCGATCGAAATCAGCATTATTGACACATCAAATCGTACATTACGATTCGCAACCATTCCAATGCGATACATGTTTGAAACCGTTGAAAACATATGAAAGTTATATAGCACATCGTCGTCGCCATTTGAAAGTATATTGTAGACAATGTAATTTGGGTTTTATATCGAAAGCGGAATATAAAAGCCACATTGAGGCTAAACATGAGCAAACATCCAATGTTTGTACAGtttgtaataaaacatttgCTAGTAAATACTATTTGGATTACCATAATAAATTACACGAagagaattattataaagaacgCAATTTCCTATGTGCCATCTGTAATAAAACATTTCTAAGAAAGAAGCATTTGGATCGACATATAAAATTATCGCATACAGACGATGGACGGAAATATGTCTGTGATGTTTGTGGTAAAGAAATGCCGACAATGACGAAATTAACTTACCATAAGAATTACCATCAAGGCATCAAGCCGAACGAATGTCATTTGTGTGGTAAGAAATTCAATCGGAAAGATACATTAGTACAACATATGCGTACACATTCCGGTGAGAAGCCATATAGTTGTCAATTTTGTGGTAAAGCATTCACACAAGGTGGACCATTGAAGATACATTTACGTCAACATACAGGCGAGAAACCATACACGTGCAATATTTGTCAAGAGAATTTTATTAGTAAAACTGTTTTGACTgtacatttgaaaaataaacaccAAAAAGTTtga
Protein Sequence: MSSEHQSKSGEWGEEYELTWDGAYRCLQCFKVFKKHDILKRHLLFVHTENRPYQCNLCTKSFKHMDHLKVHLNTHNRKTYKCEICYKILYSERYFKIHMERHSNILKYSCDICGEGFPTHDDCRKHRDGEHNNAYLCDICGISLCDKQSLKTHRRRHDKDYTKRRDFKCEFCTKSFMQAFHLRNHIRRMHNHNRQKYICELCGKEYTTSSSLKLHQTTHPNMNKELEAKNTLTTYQKKAPSNLKHCPHCTKTFPKKRQLKKHLFVHTDYRPYTCDLCNKSFKRKETYTRHRNNHDNATHYECDICLKQIKTKLGYLSHKRRHLKDFKEICSICGNGFISTAEYRSHMLSKHGNNKCDICQKTFCDKYALKEHVKLHDKNYYENRNYKCEFCQKKFLQMLHLKKHIKRMHNDNRQKYICDLCGKELKSLTGLKNHHNVHQGDKTHVCPDCGKRFVRKDTLVLHMRTHSGEKPYICQLCGKAYSQLSPLRIHLRQHSGEKPYGCDICDKRFVSKGILSIHLKNKHHKLDYWTAAPRVSFFCPICNRECRSKSALLTHQIVHYDSQPFQCDTCLKPLKTYESYIAHRRRHLKVYCRQCNLGFISKAEYKSHIEAKHEQTSNVCTVCNKTFASKYYLDYHNKLHEENYYKERNFLCAICNKTFLRKKHLDRHIKLSHTDDGRKYVCDVCGKEMPTMTKLTYHKNYHQGIKPNECHLCGKKFNRKDTLVQHMRTHSGEKPYSCQFCGKAFTQGGPLKIHLRQHTGEKPYTCNICQENFISKTVLTVHLKNKHQKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -