Basic Information

Insect: Zonitis immaculata
Gene Symbol: -
Assembly: GCA_037414775.1
Location: JAZBGX010000995.1:1-5278[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 1.6e-05 0.0009 19.3 5.6 1 23 13 35 13 35 0.98

2 28 0.00032 0.018 15.2 1.9 1 23 41 63 41 63 0.98

3 28 0.004 0.23 11.7 4.8 1 23 69 92 69 92 0.97

4 28 3.7e-05 0.0021 18.1 2.7 1 23 96 118 96 118 0.99

5 28 0.00078 0.045 13.9 6.0 1 23 128 151 128 151 0.98

6 28 1.5 84 3.6 1.6 1 23 158 180 158 180 0.86

7 28 4.2e-07 2.4e-05 24.2 0.8 1 23 186 208 186 208 0.99

8 28 6.2e-07 3.6e-05 23.7 0.9 1 23 214 236 214 236 0.97

9 28 0.0015 0.085 13.1 2.9 2 23 277 299 276 299 0.95

10 28 3.6e-05 0.0021 18.2 4.0 1 23 305 327 305 327 0.99

11 28 1.5e-05 0.00084 19.4 1.0 1 23 332 354 332 354 0.98

12 28 0.0012 0.069 13.4 0.0 2 23 361 383 360 383 0.90

13 28 0.00032 0.019 15.1 5.6 3 23 389 409 387 409 0.96

14 28 5.8e-05 0.0033 17.5 4.6 1 23 419 442 419 442 0.98

15 28 0.0004 0.023 14.8 0.2 1 23 449 471 449 471 0.98

16 28 0.00014 0.0081 16.3 3.7 1 23 477 499 477 499 0.99

17 28 2.7e-07 1.6e-05 24.8 1.0 1 23 505 527 505 527 0.99

18 28 0.0044 0.26 11.6 1.8 1 23 533 556 533 556 0.97

19 28 0.013 0.77 10.1 2.3 1 20 568 587 568 591 0.96

20 28 6.4e-07 3.7e-05 23.7 5.1 1 23 597 619 597 619 0.98

21 28 0.00039 0.022 14.9 4.5 1 23 626 648 626 648 0.99

22 28 0.0001 0.0058 16.7 0.6 1 23 654 677 654 677 0.93

23 28 0.00051 0.029 14.5 0.4 3 23 683 703 682 703 0.98

24 28 3.9e-05 0.0023 18.0 5.0 1 23 713 736 713 736 0.98

25 28 0.13 7.6 6.9 2.0 1 23 743 765 743 765 0.98

26 28 0.00026 0.015 15.4 4.2 1 23 771 793 771 793 0.99

27 28 1.7e-07 9.5e-06 25.5 0.4 1 23 799 821 799 821 0.99

28 28 0.081 4.7 7.6 5.0 1 23 827 850 827 850 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	1.6e-05	0.0009	19.3	5.6	1	23	13	35	13	35	0.98
2	28	0.00032	0.018	15.2	1.9	1	23	41	63	41	63	0.98
3	28	0.004	0.23	11.7	4.8	1	23	69	92	69	92	0.97
4	28	3.7e-05	0.0021	18.1	2.7	1	23	96	118	96	118	0.99
5	28	0.00078	0.045	13.9	6.0	1	23	128	151	128	151	0.98
6	28	1.5	84	3.6	1.6	1	23	158	180	158	180	0.86
7	28	4.2e-07	2.4e-05	24.2	0.8	1	23	186	208	186	208	0.99
8	28	6.2e-07	3.6e-05	23.7	0.9	1	23	214	236	214	236	0.97
9	28	0.0015	0.085	13.1	2.9	2	23	277	299	276	299	0.95
10	28	3.6e-05	0.0021	18.2	4.0	1	23	305	327	305	327	0.99
11	28	1.5e-05	0.00084	19.4	1.0	1	23	332	354	332	354	0.98
12	28	0.0012	0.069	13.4	0.0	2	23	361	383	360	383	0.90
13	28	0.00032	0.019	15.1	5.6	3	23	389	409	387	409	0.96
14	28	5.8e-05	0.0033	17.5	4.6	1	23	419	442	419	442	0.98
15	28	0.0004	0.023	14.8	0.2	1	23	449	471	449	471	0.98
16	28	0.00014	0.0081	16.3	3.7	1	23	477	499	477	499	0.99
17	28	2.7e-07	1.6e-05	24.8	1.0	1	23	505	527	505	527	0.99
18	28	0.0044	0.26	11.6	1.8	1	23	533	556	533	556	0.97
19	28	0.013	0.77	10.1	2.3	1	20	568	587	568	591	0.96
20	28	6.4e-07	3.7e-05	23.7	5.1	1	23	597	619	597	619	0.98
21	28	0.00039	0.022	14.9	4.5	1	23	626	648	626	648	0.99
22	28	0.0001	0.0058	16.7	0.6	1	23	654	677	654	677	0.93
23	28	0.00051	0.029	14.5	0.4	3	23	683	703	682	703	0.98
24	28	3.9e-05	0.0023	18.0	5.0	1	23	713	736	713	736	0.98
25	28	0.13	7.6	6.9	2.0	1	23	743	765	743	765	0.98
26	28	0.00026	0.015	15.4	4.2	1	23	771	793	771	793	0.99
27	28	1.7e-07	9.5e-06	25.5	0.4	1	23	799	821	799	821	0.99
28	28	0.081	4.7	7.6	5.0	1	23	827	850	827	850	0.96

Sequence Information

Coding Sequence: ACTGCATATATTGTTTGTCCATTTCAAGAATGTCCATatcaatgtaaattttgtacaaaGACATTCAAGCATCAAAGCAAATTGAAAGTTCATGAACGTGCACACGATAAAACGTTGAAATTTGAATGCGACATTTGTCTAAAGAAATACTCGTctgaatattatttgaaagatcATAAAAAAAGTCATACGGATAGTGCAAAGTTTTGTTGCGACATTTGCGGTAAAGGTTATCAAATGCAAAAAGTATTGAAGCATCATATGAAAAGTAAACATGAGAATGCTTATCGTTGCGATATTTGCGGTAGATGTTTGAATAGTAATGAAACTCTACAATTACATAAGAGACGGCACGACAAGAATTACACGAAGAATCGtaatttcaaatgtgaatattGTTCGAAAACATTCTTGCAAAGCATACATTTGAAACATCACATACAACGTATGCATAACGATAATCGACACAAATATATTTGCGATTTGTGCGGTAAAGTCTTGCTGAATTTGGAAAGTTACAATTATCATTGTAAAACACATTCCGGTATCAAAGCATACCAATGCGACACCTGTGGCAAGCAATTCGTTAGAAAATACTCTTTGGTATTACATCTACGTATACATACCGGAGAGAAACCGTATGCTTGTAATACTTGTGGtaaaaaatttgtacaaagaAGTAAACTGACTGTACATTTACGTGAACATACCGGAGAGAAACCGTACAGTTGTATTATTTGTGAGAAGAAATTCGTTTGTAAACTAACCCATGATAATCATATGAAACGAATACAtaagaaattATACCAAATATTGCTGAAACCCATCCAATGTCAGcattgtttgaaatatttcaaaacaaaacgaacatTGCGGATACATGAGATGAGTGTACATTCCGACAAACGTCCATATTCTTGTGAAATATGTAATCGTTCGTTTAAATTGAAACATCAAATGAAAGCCCATAGAAATACGCACGATAGTGCCAAATTCGAATGTGATATTTGCCAAAAGAAAGTGACCAGTAACTATTCGTTGAAAGTCCATCAATTGCGCCATTTCAAagattacaatatttattgcgACATTTGCGGACAAGGTTTCGTATCGAATGCTGAATATAAAATCCATTTGGATGGTAAACATAATAAGGCACATCTGTGTAATACGTGCGGTAAATCGTTGTATGATAAACATTCGTTGAAATTGCATATGAAACGACACGAAGAGAATTATACGGAGAAACGtaatttcaaatgtgaattttgtACGAAAAGTTTTATGCaattgttccatttgaaaattcACATTCGACGGATGCACAACGATAATCGCCAAAAGTATATTTGTGATTTGTGTGGTAAAGAAATAACGAGTCTTACTGGTTTGAAAGAACATCGCAATACACATTTAGATTTGAAATCGTACGAATGTGGTACTTGTGGgaagaaatttttgaaaaatcacaCTTTAAGAAACCATTTACGTACACATACCGGAGAAAAACCGTATGTTTGTAATATTTGTAGTAAATCTTTTACACAACGTAGTCCATTAACGATACATCTACGTAAACATACCGGGGAGAAACCGTACAGTTGCGATATTTGTCAAGAGAAATTCGTCAGTAAACAAGATCGGGATTATCATATGAAAAGAAAACATCAGAAATTGAATGAAATATCACAACCAACTGACCACCAATGTTCGAgatgtttaaaattttataaatctaaaCGTTCATTGAGGGTCCATATATGGTATGCTCATTCGGACAAACGTCCGCATTCATGTACAATTTGTAAGAAATCATTTAGACGAAGTGATCAATTGAAATCGCATCAAAACACTCATCGACAACAGTCAAAGCAATTCAAATGTGATATCTGCCATAAATTCTTGGCAACAatgtataatttgaaaatgcACAAACGTCGCCATTTGAAAGATTATGAATTCAATTGTGGCATTTGTGGACGAGGTTATATTCAAAAAAGTGAATATGAACACCATATGGATGGTAAACATAATCGTACACAATTATGTTACATCTGTGGTAAGTCATTGTTTGATAAGCGTGCTTTAGTTTTACATATGAAACGACATGAAGAGAATTATACAGAGAAACGTAATTatcaatgtaaattttgtacGAAATCATTCATGCAAGagttccatttgaaaattcACATCCGACGGATGCATAATGATAATCGTCAAAAGTATATGTGTGATTTGTGCGGTAAAGAAATTACATGTCTTGCTGGTTTAAAAGAACATCACAAGACACATTCAAATGTAAAATCGTACGAATGTGGTACTTGTGGAAAGAAATTTATGAAACATAACACTTTAAGAAACCATTCACGTACACATACCGGCGAGAAACCGTATGTTTGTGATATTTGTGGTAAATCGTATACACAACGTAGTCCTTTAACAATACATCTACGTAAACATACCGGAGAGAAACCGTACGATTGCGATATTTGCCATGAGAAATTTGTTAGTAAGCACGACAGAGATTATCATTTGAAGAAGAAACATCAAGCTTTATAG
Protein Sequence: TAYIVCPFQECPYQCKFCTKTFKHQSKLKVHERAHDKTLKFECDICLKKYSSEYYLKDHKKSHTDSAKFCCDICGKGYQMQKVLKHHMKSKHENAYRCDICGRCLNSNETLQLHKRRHDKNYTKNRNFKCEYCSKTFLQSIHLKHHIQRMHNDNRHKYICDLCGKVLLNLESYNYHCKTHSGIKAYQCDTCGKQFVRKYSLVLHLRIHTGEKPYACNTCGKKFVQRSKLTVHLREHTGEKPYSCIICEKKFVCKLTHDNHMKRIHKKLYQILLKPIQCQHCLKYFKTKRTLRIHEMSVHSDKRPYSCEICNRSFKLKHQMKAHRNTHDSAKFECDICQKKVTSNYSLKVHQLRHFKDYNIYCDICGQGFVSNAEYKIHLDGKHNKAHLCNTCGKSLYDKHSLKLHMKRHEENYTEKRNFKCEFCTKSFMQLFHLKIHIRRMHNDNRQKYICDLCGKEITSLTGLKEHRNTHLDLKSYECGTCGKKFLKNHTLRNHLRTHTGEKPYVCNICSKSFTQRSPLTIHLRKHTGEKPYSCDICQEKFVSKQDRDYHMKRKHQKLNEISQPTDHQCSRCLKFYKSKRSLRVHIWYAHSDKRPHSCTICKKSFRRSDQLKSHQNTHRQQSKQFKCDICHKFLATMYNLKMHKRRHLKDYEFNCGICGRGYIQKSEYEHHMDGKHNRTQLCYICGKSLFDKRALVLHMKRHEENYTEKRNYQCKFCTKSFMQEFHLKIHIRRMHNDNRQKYMCDLCGKEITCLAGLKEHHKTHSNVKSYECGTCGKKFMKHNTLRNHSRTHTGEKPYVCDICGKSYTQRSPLTIHLRKHTGEKPYDCDICHEKFVSKHDRDYHLKKKHQAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -