Zimm008579.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zonitis immaculata
Gene Symbol
-
Assembly
GCA_037414775.1
Location
JAZBGX010002963.1:1929-10795[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 45 0.0068 0.39 11.0 2.2 1 23 16 39 16 39 0.92
2 45 1.1e-06 6.6e-05 22.9 1.6 1 23 45 67 45 67 0.99
3 45 0.095 5.5 7.4 1.8 1 23 73 95 73 95 0.98
4 45 0.00089 0.051 13.8 0.3 1 23 101 124 101 124 0.98
5 45 0.00023 0.013 15.6 3.3 1 23 128 150 128 150 0.98
6 45 0.0034 0.19 11.9 1.4 1 23 160 183 160 183 0.96
7 45 0.0073 0.42 10.9 1.1 1 23 190 212 190 212 0.93
8 45 8e-06 0.00046 20.2 2.2 1 23 218 240 218 240 0.98
9 45 2.1e-07 1.2e-05 25.2 0.7 1 23 246 268 246 268 0.98
10 45 2.7 1.6e+02 2.8 5.1 1 23 274 297 274 297 0.76
11 45 0.0054 0.31 11.3 4.7 1 23 309 332 309 332 0.94
12 45 2.2e-07 1.3e-05 25.1 1.9 1 23 338 360 338 360 0.99
13 45 0.003 0.17 12.1 4.0 1 23 366 388 366 388 0.98
14 45 0.027 1.6 9.1 1.1 2 23 395 417 394 417 0.95
15 45 7.5e-05 0.0043 17.1 3.3 1 23 421 443 421 443 0.98
16 45 0.046 2.7 8.4 4.1 1 23 456 479 456 479 0.93
17 45 1.1e-06 6.6e-05 22.9 0.4 1 23 485 507 485 507 0.99
18 45 0.076 4.4 7.7 6.7 1 23 513 535 513 535 0.97
19 45 1.2 69 3.9 0.1 3 12 544 553 543 555 0.89
20 45 0.002 0.11 12.7 0.3 1 23 569 591 569 591 0.97
21 45 0.00053 0.031 14.5 1.3 1 23 630 653 630 653 0.96
22 45 0.015 0.86 9.9 1.6 1 23 659 681 659 681 0.98
23 45 0.00012 0.007 16.5 2.5 1 23 687 709 687 709 0.98
24 45 0.00089 0.051 13.8 0.3 1 23 715 738 715 738 0.92
25 45 0.0061 0.35 11.1 4.1 1 23 742 764 742 764 0.98
26 45 0.00021 0.012 15.8 3.5 1 23 774 797 774 797 0.98
27 45 1.5e-07 8.7e-06 25.6 1.0 1 23 832 854 832 854 0.99
28 45 9e-06 0.00052 20.0 3.8 1 23 860 882 860 882 0.97
29 45 1.6 95 3.5 0.4 1 13 888 900 888 902 0.89
30 45 0.0026 0.15 12.3 2.2 1 23 906 929 906 929 0.96
31 45 1.4e-05 0.0008 19.5 0.5 1 23 935 957 935 957 0.98
32 45 0.33 19 5.7 3.4 1 23 963 985 963 985 0.98
33 45 0.004 0.23 11.7 4.3 1 23 991 1014 991 1014 0.96
34 45 0.00054 0.031 14.5 0.9 3 23 1020 1040 1018 1040 0.97
35 45 7.7e-05 0.0044 17.1 1.8 1 23 1050 1073 1050 1073 0.97
36 45 0.00011 0.0066 16.6 0.7 1 23 1108 1130 1108 1130 0.99
37 45 5.4e-07 3.1e-05 23.9 5.2 1 23 1136 1158 1136 1158 0.99
38 45 0.001 0.057 13.6 2.6 1 23 1186 1209 1186 1209 0.94
39 45 1.2e-05 0.00072 19.6 2.6 1 23 1215 1237 1215 1237 0.98
40 45 0.046 2.7 8.4 2.3 1 23 1243 1265 1243 1265 0.98
41 45 0.022 1.3 9.4 1.2 1 23 1271 1294 1271 1294 0.93
42 45 4.4e-05 0.0025 17.9 3.0 1 23 1298 1320 1298 1320 0.98
43 45 3.4e-05 0.002 18.2 2.9 1 23 1330 1353 1330 1353 0.97
44 45 0.00039 0.022 14.9 1.6 1 23 1388 1410 1388 1410 0.99
45 45 3.5e-07 2e-05 24.5 4.8 1 23 1416 1438 1416 1438 0.99

Sequence Information

Coding Sequence
ATGGctagtataaaaaaattGtatcaacaaacaacagaAGGTGCCCATCAATGTCTTcaatgttggaaaattttcaaagcCCGTCGATATTTGCGACGACATTTAATATTCGTCCATACCGACAATCGTCCATATCAATGTAAATTGTGTCCGAAATCATTCAAACAATTGGATACGCTGAAGGTTCATGAACGTCGCCATGataaaacattgaaattcGAATGTGATATTTGTCATAGTAAAGTCGGTTCggaatattatttgaaaatccatAAACAACGACATTCGGGTACGATGAATTATAAATGTGAAATTTGCGGCAAAGGATTCTTATTGAATGCTGAATATATCCAACATATGAAGAGTAAACATGAAAATACGTATTGTTGTGATGTTTGCGGTAGGTCATTGAACAATAAAAGGGATTTGAAGTGGCACAAGAAACGACACgaagaaaattataacgaGAATCGTAATTTTATCTGTGAATATTGTTCGAAAACATTCCTACGCGATACGTATTTGAGGAAACATATAGCAAAGATGCATAATGATAATCGACGGAAATTCATCTGTGATTTGTGTGGCAAAGAATTGACAAGTTTGGAAAGTCTTCGGAATCATTGTAAAATCCATGCCGGTATCAAGTCGCATGAATGTGATCGATGCGGCAAGAAATTTGTAAGAAAAGAGACATTAAGCGAACATGTACGTACACATTCCGGTGTTAAACCGTATGCTTGTAATATTTGTGGTAAAACATTCACACAACGTAGTCCATTAACGTTACATTTACGTAAACATAACGGTGAAAAACCGTATAGTTGTGAACTTTGTGATGAGAAATTTGTTTGTAAACAATATCGCGATCATCATATGAAACGAGTACATAAGAAATTGTATGAACTAACAACCGATGGTGCCTACCAATGTCTGCAATGTTCGAAAGTTTTCAAGAAACATTCCTATATAAGACGACATTTACTATTTACGCATACCGACAATCGTCCTTatcaatgtaaattttgtGGCAAATCATTTAAAAATCGAGATGCATTAAGAGTTCATGAACGACGACATGATGTAACAGTCAAATTCGAATGTGAAGTTTGCGAAAAGAGTTACTCCTCgcaatattatttgaattgtcaTAGAAAAAGTCATATGGGCACATCAAAGTGTATTTGTGATATTTGCGGAAGAGGATATCAAACGTACGTGGTATTGAAGAGTCATAAGAGAATTAAACATCGTGGTGGTTATTGTTGTGATATTTGTGGTAAAGCGTTAAGTGATGAACATTCATTCAAAGTACATATGAAAAGACACAAAAAAAGAAGGTATGAGCTAACAAACGATGGTGGCTATCAATGTCTTCAATGTTCAAGAATTTTCAAGAAACATTCCTATATAAGACGACATGTATTATTTACGCATAGCGAAAATCGTCCTTATCAATGTAAATATTGTGGGAAGTCATTCAAAGATCCTGGTGGTATTCGAGTTCATGAACGTCGACATGGTACAACATTGAAATTTGTATGTGATATTTGCCATAAAGTTTACTATTCtcgatattatttgaattgtcaTAAAAAAAGTCATATGGGCGAATTTACAACTagtttttgtgaaatttgcGGAAAAGGTTATCGAACGGCTATTATATTAAAGAGTAATGAGACAATGAAACATGATAGTGGCTATTGTTGTGATGTTTGTAATGCATCTTTGAGTGATGAGAATGCATTGGAGATACATATGAAGCAACACGGGAGAAATTTGATGGAGAAACGAAGTTTAAAATTACGTACACATACCGGTTTTATACCGTGTTCTTGTCGTATTTGTGGTTTTACAATGTATCGACAAACAACTGATGGCGGCTATCAATGTCTGGAATGTTCGAAAATCTTCAGTGCAcgtaataaattgaatcggCATTTGAAATTTGTCCATACAGAAGATCGTCCATTCCAATGTAAATTGTGTATGTTAACATTGAAAAATCGAGATACATTACGAGTCCATGAACGTCGCCATGTTAAAATAGTGAAATTTGTTTGTGATATTTGTTTGAAGAAATTCAATTCGAAATATACATTGGAAAGTCATAAAAAACGTCATGTGACgatatcgaattattattgtgaaatttgcGGTGCAGGCTTCTCGATGAAAATGGATTACAAACGACACTTGGATGCTAAACATAAAAAAGTGTTTTCTTGTGATGTTTGTGGTAGATGTTTGTCTGATGGACATTCATTGAAATTGCACAAGAAACGACACGAAGAGAATTATACGGAGAAACGtaatttcaaatgtgaattctGTACGAAATCATTCATGCAAGAATTACATTTGAGAATCCATATTCGACGGATGCACAACGATAATCGAAAGAAATATATTTGCGAGCTGTGTGGTAAAGAGATGCTGAGTTTGGACGGTTTCAAAAATCATTGTAAACTACATGCCGGTATTAAATCGTATGAATGCGAGACATGCGGGAAGAAATTCATAAAACAAAGTTCATTAACAATACATTTACGTACACATACTGGTGCGAAACCGCATAGTTGTCATGTTTGCGGTAAGAAATTCACACAACGTAGCCCGTTAGTGATACATTTACGTAAACATACCGGGGAAAAACCGTACAGTTGCGATATTTGTCCAGAAAAGTATTATCAAAAAACAGCCGATGGTGGCTATCAATGTCTTCAATGTTTGCGAGTTTTCAAAAAACgcaataaattgaatcgacATGCCAAATATGTCCATACCGACAATCGCCCGTATCAATGTAAATTGTGTCCGAAATCATTTAAACAAATGGGTGGACTCAAAGCACATGAACTGAGACATGataaaacattgaaattcGAATGTGATATTTGTCATAGTAAAGTCGGTTCGGAGcattatttgaaaatccatAAACAACGCCATTTAGGGAAGATGAATTACAAATGTGGCATTTGCGGTAAGGAATTTATGAGTAAACACGAATGTAACAAACATATCAAGGGTAAACACGAAAATATGTATGGTTGTGATATTTGTGGTAGATCTCTAAATAGTAAAGAAACATTAAAGTTACATAAGAAACGACATGAAGAGAATTATATGGAGAATCGTAATTTTGTATGTGAATTTTGTTCGAAAACATTCATCGAACAAATGTATTTGAAGAAACATATAAAACGGATGCACAACGATAATCGACAGACATATATTTGCGATTTGTGCGGTAAAGAAATATTGAGTTTGGGAGGTTTCAAAGATCATTGTAAACTTCATGCCGGTGTTAAATCGTATGAATGTGAGACTTGTGGCAAGAAATTCCTAAAAAGTGCCACATTATCGGTACATTTACGTACACATACCGGTGTTAAACCGTACAAATGTCACATTTGCAATAAATCGTTTACACAAAGGACTACGTTAACAATACATTTACGTAAACATACCGGTGACAAACCGTACGATTGTTATATTTGTGAAGAGAAATTCGTTTGTAAACAGTATCAACTAACAACCGACGGTGCCTATCAATGTCTTCAATGTTCGAAACTATTCAAATCACGTCGAACTTTAAGACGACATTTATTATTCGTCCACACCGACAATCGGCCATATCAATGTAAATTGTGTCCGAAATCGTTTAAACAAACGAAGACATTAAAAGTTCATGAACGGCAGCATGGTGAACGATCGCAATTTGAATGCGATATTTGTCATATTAAAGTCGGCTCCGAACATTATTTGAACATCCATAAACAACGTCATTCAGGAACAATAAATCATACTTGTGAGATGTGTGGTAAAGGATTTGTAACAATTGGTAAATGTAACGAACATATCAGAGGTGTACATAGAAAAGCGTATTGTTGTGATGTTTGCGGTAAATCGTTGTACgataaaaattcattgaaattgcACATGAAACGACACGAAGACAATTACAAAACAGAACGTAACTTTATTTGTGAATATTGTTCGAAAACGTACATGCAAGAGTCCCATTTGAAAATGCATATTCGACGGATGCATGATGGTAAACGACAGACGTACGTATGTGAGTCGTGTGGTCAAGAGATGATGAGTTTGAGTACGTTTAAAGATCATTGTAAACTACATGCCGGTATCAAATCGTATGAATGTGAGACTTGTGGTAAGAAATTCTTGAGGAATTTTACGTTAATGGTACATTCACGTACACATACCGGTGTCAAACCGTATACGTGTCATGTTTGCAATAAAACATTCACACAAAGAAGTACGTTAACAATACATTTACGTAAACATACCGGTGAAAAACCGTACGATTGTAGTATTTGTGGAgataaatttgtttgtaaGAAACGTCGTGATAATCATATGAAACACGTACATAAGATCTTATAA
Protein Sequence
MASIKKLYQQTTEGAHQCLQCWKIFKARRYLRRHLIFVHTDNRPYQCKLCPKSFKQLDTLKVHERRHDKTLKFECDICHSKVGSEYYLKIHKQRHSGTMNYKCEICGKGFLLNAEYIQHMKSKHENTYCCDVCGRSLNNKRDLKWHKKRHEENYNENRNFICEYCSKTFLRDTYLRKHIAKMHNDNRRKFICDLCGKELTSLESLRNHCKIHAGIKSHECDRCGKKFVRKETLSEHVRTHSGVKPYACNICGKTFTQRSPLTLHLRKHNGEKPYSCELCDEKFVCKQYRDHHMKRVHKKLYELTTDGAYQCLQCSKVFKKHSYIRRHLLFTHTDNRPYQCKFCGKSFKNRDALRVHERRHDVTVKFECEVCEKSYSSQYYLNCHRKSHMGTSKCICDICGRGYQTYVVLKSHKRIKHRGGYCCDICGKALSDEHSFKVHMKRHKKRRYELTNDGGYQCLQCSRIFKKHSYIRRHVLFTHSENRPYQCKYCGKSFKDPGGIRVHERRHGTTLKFVCDICHKVYYSRYYLNCHKKSHMGEFTTSFCEICGKGYRTAIILKSNETMKHDSGYCCDVCNASLSDENALEIHMKQHGRNLMEKRSLKLRTHTGFIPCSCRICGFTMYRQTTDGGYQCLECSKIFSARNKLNRHLKFVHTEDRPFQCKLCMLTLKNRDTLRVHERRHVKIVKFVCDICLKKFNSKYTLESHKKRHVTISNYYCEICGAGFSMKMDYKRHLDAKHKKVFSCDVCGRCLSDGHSLKLHKKRHEENYTEKRNFKCEFCTKSFMQELHLRIHIRRMHNDNRKKYICELCGKEMLSLDGFKNHCKLHAGIKSYECETCGKKFIKQSSLTIHLRTHTGAKPHSCHVCGKKFTQRSPLVIHLRKHTGEKPYSCDICPEKYYQKTADGGYQCLQCLRVFKKRNKLNRHAKYVHTDNRPYQCKLCPKSFKQMGGLKAHELRHDKTLKFECDICHSKVGSEHYLKIHKQRHLGKMNYKCGICGKEFMSKHECNKHIKGKHENMYGCDICGRSLNSKETLKLHKKRHEENYMENRNFVCEFCSKTFIEQMYLKKHIKRMHNDNRQTYICDLCGKEILSLGGFKDHCKLHAGVKSYECETCGKKFLKSATLSVHLRTHTGVKPYKCHICNKSFTQRTTLTIHLRKHTGDKPYDCYICEEKFVCKQYQLTTDGAYQCLQCSKLFKSRRTLRRHLLFVHTDNRPYQCKLCPKSFKQTKTLKVHERQHGERSQFECDICHIKVGSEHYLNIHKQRHSGTINHTCEMCGKGFVTIGKCNEHIRGVHRKAYCCDVCGKSLYDKNSLKLHMKRHEDNYKTERNFICEYCSKTYMQESHLKMHIRRMHDGKRQTYVCESCGQEMMSLSTFKDHCKLHAGIKSYECETCGKKFLRNFTLMVHSRTHTGVKPYTCHVCNKTFTQRSTLTIHLRKHTGEKPYDCSICGDKFVCKKRRDNHMKHVHKIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-