Basic Information

Gene Symbol
Camta1_1
Assembly
GCA_037414775.1
Location
JAZBGX010001209.1:9924-17647[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.6e-14 2.4e-10 39.9 0.4 80 116 2 37 1 37 0.95
2 3 1 1.5e+04 -4.6 4.1 29 77 491 536 479 548 0.51
3 3 0.27 3.9e+03 -2.7 3.1 12 87 1296 1377 1290 1383 0.65

Sequence Information

Coding Sequence
atgTGTATTTATGGATGTTACGTTCATTCAGCGATATTACCGACGTTCCATCGCCGTTGCTATTGGCTACTTCAgaatccGGATATTGTActtgttcattatttaaatgttcCATATCcggatgataataaattagcTGTAATAACCCCTAGTTTGGCTTTATGGGCTGATAAGAAAGAATGGACAAAAGATGAATTGGTGTCACAATTGAAACCGATGTTTTTTAGTGAAGATGAACCAGATATAAACAACGAATTAGAAATATCgACTGCAGAAACTGTAGAAGCGATAGTTAGtcaattaatggaaaaacaaCGTGTTGCCCGTCAAGCAGCTCTTGTAAAACAATTAGAATGCGGTTGTCCAGATTCTACATGTGCTGATGGTAAAAGTTGTTCGCATCCAATGCGTCGTATAACATCAGCAAAAGATttaacattatcatcatcatcagctacaacaacaacaacaacaacaactgcaTCAACcacgacgacaacaacaacaacaagtacatcatcaacaactttAAATAGTACAATATCAAATTCACGTCCATCTAGTggtactgataataataatcaagtatcatcaacaacaggatcattattattaacaactaataatcataataataataataataatccaccAAGAGTGTATTCGCGTGATACAAGAAATCACCATCATCAGcataatcatcaacaacaacaacaaacaaattgtaGTTCAAGTTCAGGAAACACACCACCATTAGTTTTGAGTTTATCACAATTACAAAGTAGTGGCGgcttattaattttgaatagtaattcgaataatacaacaaataattcaaatcatcatcatcatcatcaccatcatcaaaaTGTTATTACACCAGTATCTGTTGCGAATTTCGTTTGTAATACAAATCATTTACGTATAAAAAATGAAGCACGTAATACAACTAGTCATTTAGTTTTAAAGCAAGAAATTATGGATACGAATCCACCATCGACATcgtcaacatcatcaacaacatcatcttCAACTACAACAGTGAAACAGcaagataataaaaatcaacgcGACGGaatggaaattaatgaaaatttacgaCAATCAGTATTCGATAGTATTCCGTATAATAGACAAGAACAATCatcgcaacaacaacaacaacaacaacaacagactGAAGTGATAATGTCTAGTGCCCCATCCACACCATCTAAACAAATGGATACAAGTCATGAAGATGTAATTGATGAATTCAaacatcaaaatttttgtaatgatACAGTTGTATTACTTGGTACTGATTCAAGTGGCTCTTTAATTAGTAAAAGtgataattcatcaattattaatggTGGCTTTTTCAATGAAACTTTAGATTTATCTCAAGAAGATATCCAAAGAACATTATCAGCTAATATGCCATTGTGTTCAAATGAGCGTCCGGAAGCGGGCAATTGCgcccaccatcatcatcaccatcaacctcaaccacaacaacaacaacaacaacaaaatcatcatcaacaacaacaattacatcaccaccatcatcatcaaaataataaacatcaaaacgaacagcagcaacaacaacaacaacaacaacaacattcacttcatcaacaacaagaaattaacccaatggattttattgatagttgtgatgttgttgtatcaCCGACgcatgttgttgatgatgatgtattTGTTAATTTGGATGCTTTTGATATGTTGGGTGAATTTCCCGATTTAGAGGCTCTAGATTCTGGCCAAAATGCTAGTCTACTTGATGTTCATCCGTCCGAAACGAATCGACaagacaaaacaacaaatctaaatccaactaataataataataataataataataataattgcaataataataatcaacaacaattagaagGTTCAGCGAAGATTACTGATTATTCACCAGAATGGGCCTATCCAGAAGGTGGTGTTAAAGTTCTTGTTACAGGACCGTGGCATTCATCTGGACCTTATACTGTATTATTCGATACATTCCCAGTACCAACTACTCTAGTCCAAAGTGGTGTTTTACGTTGCTATTGTCCAgCTCACGAAGCCGGTTTAGCAACACTTCAAGTAGCATGTGACGGTTATGTGATTTCCAACTCTGTgatattcgaatataaattaCCACCGAGAGAAGAACAAGTTACAGCACCTGAACCGAAAATCGAACGCtccaatgataatttattaaaatttacattattacaACGATTGGAGGCAATGGATGATCGTTTACAAATCAAACAAGAACCAGTCGACGGCCCAGATTGTGTGGAGGACAGTGCGCTGTTTACGCAGTCGAATTTCGAGGATCGTCTAGTGAATTTTTGTCAAAGTATGACGGCGCGCTTATGGCGCCATGGTGAAGAATTGAGTGTTAAATGGTTCGCTAGTCATCGTGGTATGACATTATTGCATTTAGCTGCTTCATTAGGTTATTCGCGTTTAGTATGCGCCTTATTACATTGGCGTGCTGAAAATTCATCATTACTATTAGAAACTGAAGTTGATGCATTAAATCAAGATGAAGATGGTTATACACCATTAATGTGGGCATGTTATCGTGGTAATAAAGAAACAGCAATAATGTTATATAAATGGAACCATATAGCattgaatatgaaaaatataacGAATCAAACATGTTTAGAAATTGCCCGATCGAATAATCATAATGAACTAGTtaaagaattagaaaaattagaattacgCCGTGATAAAGCtaatatgttattattacattcaaatagtaataataataataataataataataataataataataatagtagtaataatttcTTATCGGAATCACCAAGTGTTATATCACCAGCTAGTTCTATAGCATCATTAAGTTCAATTGCTTCAACAAGTAAATCACACGATGGTGTATTTTTACGGCCAGGAGCTGTAACAAGAAGTGAATCGcataaatatcgattattgaatttagatTTAGATCAAGATCCGAATATTATTGGTAGTAATAAAATGTTAGGATCAATGCCTAGTCCTCTATTATCCGAATCATCGGCTAATACacgcaataataacaatcatagtaataataatggacagaaattaattaaacgacCATCAATAGATAGTGGAATTCATATGAGTTGTGGTACGGAAAATAGTCGTTCGAAATCATCACggattttaacaaaacaagaTACACCGAAATTATCAAAATACGACCGCAGTATGTCTTTACCATTACATTCACCATTATCAACAAGAGACAACTCGTTCGATAGTGAATCACCGGAGAATGGCGGACGTAAAATGGATTTTGCTCTATGCGAAATAGGCAGTGGTCCAAGAAGCAGTAGTCCTTTGATTGATGTGGAGGCAGTCTCTGATGATGAAAATGATATCCACAACAACAGTACTGTAGgGGAACAAGATGCGCGTGTTCTAACATTAGCTGAACAAATTATTGCTGCAATACCTGATCGTATTAAGaatGAAAGTGAAGAAATGTTGTTGGATGGTAGTCCCGGCCCACCTGAGACTTCACTCCATTCTAATGATACTCTATCGGATGTTTTTATGGAGCCATTACTTGATCAATCATCATCTAGTTTTGAATCAACCgaatttaatttcgaattttccgaTCATAATTATAGatattaTGATGTCGGTACACCATGTTCAAGTCTTAGTCCAGCTTCTTCAAGTTGTTTACAATCACCATGTTCGTTTACATTAGAttcaccatcaccaccaccgaCTACTGCTGATTTTTGTGAATTCTTTCAAGCTTCCGGTATGGTATTCGAAAAGGACTTCTCCAATCTGACACTATCCGatCGTGAACAGCGCGAATTGTACGAAGCAGCCAAAATCATACAGAAAGCTTATCGTTCATATAAAGGCCGTCTCCAACAAGAACAAGATAAAGAACGTGCTGCAGCTATTGTtatccaaaattattatagacgTTATAAACAGTATGcctattataaacaaatgacaCATGCTGCTATGGTTATACAAAATGGTTATCGTTCATATTGTGAACATAAACGTTTTAAAAAAAGTCAAGAAGCTGCTGTttgtatacaaaattattatcgtaattataaagaacaaggtaatggtggtggtggtggtagtggtggtggacGTGGTAGTCGTGAAGGGACGCCAGCTTCTGGATTaaaacgGACTTATTCGCAACGGCGCCAACACCAAGCTGCtagaaaaatccaacaatttatgagacaatcaaaaaataaATTGCAGAAAGAACGAGCCGAAAAAGAGAAGCTGGCGGTCCTatGA
Protein Sequence
MCIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLALWADKKEWTKDELVSQLKPMFFSEDEPDINNELEISTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKSCSHPMRRITSAKDLTLSSSSATTTTTTTTASTTTTTTTTSTSSTTLNSTISNSRPSSGTDNNNQVSSTTGSLLLTTNNHNNNNNNPPRVYSRDTRNHHHQHNHQQQQQTNCSSSSGNTPPLVLSLSQLQSSGGLLILNSNSNNTTNNSNHHHHHHHHQNVITPVSVANFVCNTNHLRIKNEARNTTSHLVLKQEIMDTNPPSTSSTSSTTSSSTTTVKQQDNKNQRDGMEINENLRQSVFDSIPYNRQEQSSQQQQQQQQQTEVIMSSAPSTPSKQMDTSHEDVIDEFKHQNFCNDTVVLLGTDSSGSLISKSDNSSIINGGFFNETLDLSQEDIQRTLSANMPLCSNERPEAGNCAHHHHHHQPQPQQQQQQQNHHQQQQLHHHHHHQNNKHQNEQQQQQQQQQQHSLHQQQEINPMDFIDSCDVVVSPTHVVDDDVFVNLDAFDMLGEFPDLEALDSGQNASLLDVHPSETNRQDKTTNLNPTNNNNNNNNNNCNNNNQQQLEGSAKITDYSPEWAYPEGGVKVLVTGPWHSSGPYTVLFDTFPVPTTLVQSGVLRCYCPAHEAGLATLQVACDGYVISNSVIFEYKLPPREEQVTAPEPKIERSNDNLLKFTLLQRLEAMDDRLQIKQEPVDGPDCVEDSALFTQSNFEDRLVNFCQSMTARLWRHGEELSVKWFASHRGMTLLHLAASLGYSRLVCALLHWRAENSSLLLETEVDALNQDEDGYTPLMWACYRGNKETAIMLYKWNHIALNMKNITNQTCLEIARSNNHNELVKELEKLELRRDKANMLLLHSNSNNNNNNNNNNNNNSSNNFLSESPSVISPASSIASLSSIASTSKSHDGVFLRPGAVTRSESHKYRLLNLDLDQDPNIIGSNKMLGSMPSPLLSESSANTRNNNNHSNNNGQKLIKRPSIDSGIHMSCGTENSRSKSSRILTKQDTPKLSKYDRSMSLPLHSPLSTRDNSFDSESPENGGRKMDFALCEIGSGPRSSSPLIDVEAVSDDENDIHNNSTVGEQDARVLTLAEQIIAAIPDRIKNESEEMLLDGSPGPPETSLHSNDTLSDVFMEPLLDQSSSSFESTEFNFEFSDHNYRYYDVGTPCSSLSPASSSCLQSPCSFTLDSPSPPPTTADFCEFFQASGMVFEKDFSNLTLSDREQRELYEAAKIIQKAYRSYKGRLQQEQDKERAAAIVIQNYYRRYKQYAYYKQMTHAAMVIQNGYRSYCEHKRFKKSQEAAVCIQNYYRNYKEQGNGGGGGSGGGRGSREGTPASGLKRTYSQRRQHQAARKIQQFMRQSKNKLQKERAEKEKLAVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00841841;
90% Identity
-
80% Identity
-