Basic Information

Gene Symbol
mysm1
Assembly
GCA_037414775.1
Location
JAZBGX010002302.1:4609-7465[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.3e-07 0.00071 19.3 0.0 4 44 104 144 101 146 0.95
2 2 0.81 6.2e+02 0.3 0.2 33 45 395 407 389 408 0.84

Sequence Information

Coding Sequence
atggctGAAGAAGATGAAATCGATGTTTTGGGAGATGACTTCTGTTTAGATAATTTCCTTGGCAAAAATGATAACAGCATttATGGAAATACTCCGTTAGTATCACAGAATagtgatttattgaattgtgaTTATACAATTCATCCACAATGGTTGTTAGATCGTCCTAGTACAAATCCAGATTGTTGGTATAATACAACGTCTGTTTTAAATGATGATACAAATATACAACCATCAAATGTAGAACAGACAGATAATAGTAATATAGGTGCTGTATCaacagaaaattcaataactgATGAAAGTGGTTGGacagaaaaagagaaaaatttattagaacgcggtattgaaatttttggtaaaaGTAATGTACGTTTATCACAATTTATTGGTTCACGTACACCAGCTGaagttaaatattatttgaaaaatttctatacggatgcatcaacaattttcaatactaTTAGTAATGAGGTAGATGAAGTGACTGGTGATAATTTCGCTACTGAAGTTCTTATAGATAATCAGATACCAGCAAGTATTGAAGAAGTTATAGCTGCTGTTAGTACAGCTGAACCGACTGTGCAAATCAATAAAAGATGTAAAAAGAAAAGTCTATCAAATgatgattatattaaaaataaaaatcgtaaaatggttaaatttaaatttaaaactaaattgaaaatgCCAATCGAAGATTACAGTCAtgttgttaaacaaaaaatggtaaaaataattaatgataataaacgaaCGGAATTAACTAAAGTTGAAATAACAACAGGCAAAGGTCTTGCTGTGCCTATTTGTGAAGGTGAAGAAATTgTTACAATTCGAAAAGAAGATGTTGATTCAGatttagaaattgatattgaaaattctgATGACAATAAATCGAATACTTTATTGagcaataaaattaaaattgacaaAGAACCAGATGattcatcaaaaataaaaagtgaCGACAATAATGGTAACGATAGTAATAATGGCAAgcagaaattttcaattgatttgtcTCAATTAGATGATCATTTagttaaaaaattaacaactctGAATATACCGAAACaagaaattattctaaatgaaaattttattactgatTTGGAGAAAATTGTTCATAGTGAATTTTTTGAAGGACGTCCAACGAAAACACCATTGAGATATCTAAAAATAAGAAatcatataatcaattattggaaatcGAATAAACCATCTTATATCACCAAAACATCAATACGCCAAGGTTTGAAGAATTGTGGTGATGTTAATTGTATAAGTCGAATACATACCTATTTGGAACAAATTGGTGCAATTAATTTCGGTTGTTcTCAAACTAACTATCTAAGACCATTATTTGAAGTTTTTCAAAGTATGATGAATACGAGTCGTGAAAAGCCAAttaaagaaatcaaaaatttaacaaagaATGAAAATGAATTGAGTAATCGATCGAGAAACAAAAGGAAATTTGCTAATgATGGTGAAGGTGGTTGTACGTTGACGCATGATGAGAAAGGGGCcataattaatacaacaatagTTAATGAAACTCCAATAAAGCCGAGACCGTATGTGAAGAAGCCGTCAATTCGATTAATATATTCACGTCCATTTCCTCCAGGATCTcaaaaatttaaaataagaattgATTTAACATCTTTACTATTAATGGATTTCCATTCGCATACGTCTCTAACGGAAGTGATGGGTTTAGTTGGTGGTGTATGGGATGCaacatcaaaaattataacaataacgaAATATGTACCATGTCGTAATATAGCATCATCGGCAACGCATTGTGATATGTGTCCTATTTCACAATCGAAAGCCGCTGAACAAATACATGATggtgatttatatatattaggTTGGTTCCATTCACATCCGACATTTGCACCGGAACCATCCCAACAAGATTTAGATACACAACAGAATGTACAGAATTGGATTGGTAATAACCATATACCATGTATTGGTATTATATTGTCGCCATTTAATAGTAATGGTGCATTGATTGCATCACCATTTCGttgtataattgttgataaaaaggTCAATTTTGATGATCAATTTGTGCCTTATAAATTTAATGTCGACATAATTGCTGATGATTTAGATATTGATGGGTTTTTGAGAAATATCAAAACTATCTTCAATACAGATTGTAATGATGATCGTATTGATTTTATGCAACCGTATTTTCaagataattcaattaattatatggaaaaatttataactagTGTTAGAATGAATTTGGCTAAATGtggaattgttaataaaatgaCTTGCGATTTGCTCATCAACGGTATTACGAACGTATGCGAATCGAACGCGAATATaaaaagttaa
Protein Sequence
MAEEDEIDVLGDDFCLDNFLGKNDNSIYGNTPLVSQNSDLLNCDYTIHPQWLLDRPSTNPDCWYNTTSVLNDDTNIQPSNVEQTDNSNIGAVSTENSITDESGWTEKEKNLLERGIEIFGKSNVRLSQFIGSRTPAEVKYYLKNFYTDASTIFNTISNEVDEVTGDNFATEVLIDNQIPASIEEVIAAVSTAEPTVQINKRCKKKSLSNDDYIKNKNRKMVKFKFKTKLKMPIEDYSHVVKQKMVKIINDNKRTELTKVEITTGKGLAVPICEGEEIVTIRKEDVDSDLEIDIENSDDNKSNTLLSNKIKIDKEPDDSSKIKSDDNNGNDSNNGKQKFSIDLSQLDDHLVKKLTTLNIPKQEIILNENFITDLEKIVHSEFFEGRPTKTPLRYLKIRNHIINYWKSNKPSYITKTSIRQGLKNCGDVNCISRIHTYLEQIGAINFGCSQTNYLRPLFEVFQSMMNTSREKPIKEIKNLTKNENELSNRSRNKRKFANDGEGGCTLTHDEKGAIINTTIVNETPIKPRPYVKKPSIRLIYSRPFPPGSQKFKIRIDLTSLLLMDFHSHTSLTEVMGLVGGVWDATSKIITITKYVPCRNIASSATHCDMCPISQSKAAEQIHDGDLYILGWFHSHPTFAPEPSQQDLDTQQNVQNWIGNNHIPCIGIILSPFNSNGALIASPFRCIIVDKKVNFDDQFVPYKFNVDIIADDLDIDGFLRNIKTIFNTDCNDDRIDFMQPYFQDNSINYMEKFITSVRMNLAKCGIVNKMTCDLLINGITNVCESNANIKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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