Zimm012832.1
Basic Information
- Insect
- Zonitis immaculata
- Gene Symbol
- Arid5a
- Assembly
- GCA_037414775.1
- Location
- JAZBGX010012548.1:1-782[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.6e-28 9.5e-25 86.5 0.1 1 89 8 94 8 94 0.94
Sequence Information
- Coding Sequence
- GCTAGATCGATAGAAAATAGcgaaaataaagaatttctAAAGGAATTGAGTGTGTTtatgaagaaaaattatacaccaattggaaaaattccatCATTAGGTTATAAAgaaaTTGATCTCTATTCGTTTTATACAAAAGTTCAAAAACTTGGCGGTTATGATTCAGTAACAGCAAATCGTTTATGGAAATCGATTTTCGATGATATGAGCGGCCATCAAAATAGTACCAGTGCTGCAACTGTTATCCGTAGACATTACGAAAGatTTCTCTTGCCATATGAACGTCATGTCAAAGGTGAAGAATACAAACCGCTTCCAGTTTCTGAACGACGACGACTGAAAAGTAAAACTAGTAGTAGTACTAGTGATGCTGAAACAAGTGAAGGTACTTCAAGAAGTGGTAATAGTACACCAATACCACAAACACCAATTAcaccaattgaaaataaaGAGTTTAGTGttcaaataaaaactgaaACGAAAACATCATCGTTACGTAGTGTTCGTGTGAAATCGGATCGACAAAAAGAGAAACAAActgaaaaatcgaataataataataataataatagcaacg
- Protein Sequence
- ARSIENSENKEFLKELSVFMKKNYTPIGKIPSLGYKEIDLYSFYTKVQKLGGYDSVTANRLWKSIFDDMSGHQNSTSAATVIRRHYERFLLPYERHVKGEEYKPLPVSERRRLKSKTSSSTSDAETSEGTSRSGNSTPIPQTPITPIENKEFSVQIKTETKTSSLRSVRVKSDRQKEKQTEKSNNNNNNNSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -