Basic Information

Insect: Zhengitettix transpicula
Gene Symbol: ush
Assembly: GCA_037074705.1
Location: CM073594.1:35017375-35029566[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0065 2.2 10.5 0.1 1 20 366 385 366 387 0.95

2 9 4.7e-05 0.016 17.2 1.3 1 23 448 470 448 470 0.98

3 9 0.023 7.6 8.8 0.9 2 20 510 528 510 530 0.93

4 9 0.069 23 7.3 4.1 2 21 903 922 902 923 0.95

5 9 6.1e-05 0.02 16.9 0.1 1 20 992 1011 992 1013 0.94

6 9 0.079 26 7.1 0.2 2 23 1066 1087 1065 1087 0.96

7 9 0.0099 3.3 9.9 1.4 1 23 1093 1115 1093 1115 0.99

8 9 0.024 7.9 8.7 1.9 1 23 1167 1190 1167 1190 0.94

9 9 0.12 41 6.5 0.8 2 21 1335 1354 1334 1355 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0065	2.2	10.5	0.1	1	20	366	385	366	387	0.95
2	9	4.7e-05	0.016	17.2	1.3	1	23	448	470	448	470	0.98
3	9	0.023	7.6	8.8	0.9	2	20	510	528	510	530	0.93
4	9	0.069	23	7.3	4.1	2	21	903	922	902	923	0.95
5	9	6.1e-05	0.02	16.9	0.1	1	20	992	1011	992	1013	0.94
6	9	0.079	26	7.1	0.2	2	23	1066	1087	1065	1087	0.96
7	9	0.0099	3.3	9.9	1.4	1	23	1093	1115	1093	1115	0.99
8	9	0.024	7.9	8.7	1.9	1	23	1167	1190	1167	1190	0.94
9	9	0.12	41	6.5	0.8	2	21	1335	1354	1334	1355	0.93

Sequence Information

Coding Sequence: ATGTTAGAGTGGAAAGCCGTAACAGCCGCGAAATCGTGTACAATAAAGCCCGCGAATCTGCTCCAAAATCAACATCAGCAGGAGCGAAAACGATCGCCGACAAAAGGCAATCTGCTTGTTGACCTCGTGGCACGGACGGTTCAACCCCACGGACGCCGACGTGCCTCGAAACGAAGAAATCTCCTGTCATTCCTCCTGGCTCGGGCGTTTGGGGACTCCGTGTCAATCCGGTACAATCTTCCGGCTTCCCTAAGCAGGAAAAAAACCAGCATCATTTGGTTGATAGTAAAGTGGTCTGGATTTCTGCCTGTGGATGTCGAATTGTGGAGAGCAGGTGCCGACCATCTGGCGCGGGTGAACACCATAAAGAAGGGCGATGATAGCCCCTCCCACGCGGCCCTCCGACACGACTTTATCCGCAGCAATCGCCTGCTCAAATACGAAAAATGTCCCGTGGAAAATCGGAGTACAGCCGTATCCAAAGGCCAGTGCACAGGGATCGTGCAGTGTTTAGATTACCGACCGCCTGGGAAATATTGTTCCGCGCCGATTGGGATCAGTAATTACCAGCGGTTTGTGGTAAATCCTTTTCATCTAGAGCGTTTAGCTGACGCAGCCGACCATTCCTTAATCATTTCTTCTTCTCGGAACCTGACGGCCGCTGATGAATCATGCAGCCGAGGTGAGGACGACGAGTGGACGAGCGACGCTGAGGCCGCCGCTACGCCACCAGCCTCAGCAACAGCGACGCCGCCTCCTCCTCAGGAACAGTCGTCCCACGAGGAGCAGCAGCAGACAGATCAGGATTCTCAGGAAAAACAGGAACAGGCGCCGCCCCCGCCGCCTCCACGGAGCCCAGAGGACGCGTCGCCCCCAAGGCTACGGCTAAACGCGAGCCTTGCAACAGACCCTGCGCTGAGGTCAGGCCCAGCTCCCGACGTCGATTTTCTCTCGTCCATCGCCCCCGGTGGATTTCCCGCTGCTCTAGCTGCGAGTCCATTTTTCTGCTTACCACCCCTATCAGAAGCTGGAGCAATACTTACTCCTCGAACTAAGGCTGAGAATCTCGAAACCCCTAGGCAAGTGGTTCCAGTATTCACATGCTCACCTTGTGGAATACGTTTCAGTTCTGTCAGTACTCTAGAAGCACATCAAACATTTTACTGCTCTCACAGATTGAAGAATCTCAAAGGTCGAGGAGACAGTGACAGTGAAGAGGGTAAAACTGCAGGATCATCTGAGAATATGGTTATGCAAGGAGATGAAAGTACAGCCACCGAAAGTACAAGTGAACAAAATGGACTAGGACCAGCTTGTAAAGCTGCACGCACAGGCAAACAATATGCATGTCCACACTGTTCTTACAGTGCTGACAAAAAAGTGAGCCTGAACAGGCACATGCGCATGCACTCATCATCACCGGTAACTGCACCAGCAATGAATGGGATACCGGGTGCTGGTGAAGGTCTTTCCAATTCACCTGAAATAGCAGCAACTCTACTGAACTCACCACACCTTGTAGATCGTTATTGCCAAGACTGTGATATAAGATTCTCATCTATTAAAACCTTCAGAGCTCACAAGCTCCACTATTGTAGCACAAGACATGTAGTTAAGGCTCCCCCTGGAGTAATTTTATCTACACCATTACCAAAGACTCCATCAACTGTAGAATCTGCTCCAACTTCCCCAATAGATGTAATTTCCAGAAGCACCCCATCTCCAGCAAGTGTGCAAGATGCCAGTCACAGAAACAACCCATCAAATCACCTTCCTCCACAGCCTTTTCTTGCTCTCCCAACAAATCCGATACTAATTGTTCCTTACTCTTTGTTTCAAAATGCAAGTTTTCTCACAGGTCCTGCAGCAATGGCTATGGCAAATCAAGATGCTGCTTGTATTCTTCTTCCAAATGGTACATTGCAGCCAATGGCTCAAGGAATTTTGTCCCAATCTCTCTCACAAAGTATACCAAACTCAATACAAACTCAAAAAATGCCTGTAAAGGAAGAAATAACTGGTTCACAATCTTCAAGGAGTTCAGCACAAGTCACAAACACAGTAGTTTCACCAGCAGCTCCTTTACAAcagAGCAAACCACAACCAGCAAAAATCAGCAAAATACAGAGGACTGCAGGAGATTCTGCTTTACCTTTGGATCTCAGTATTCGTCGTTCATCTGAAAGTGGAGAACTTGTTGTTGATTTGGGCAATGAATATGACAATGAAGAAGAGAAGGAGAATCGTCGAAGTATAGACAACAACTCAAATATTTGTAGAATCATTGGCTCATCACCTGACAGAGAAGATATAGTCTGTGCTCCTTCAATTCCATACATGCTGTCAACATCATCAACATCTTCAACACCATCTCCTTCTGCAATCAGCCCAACATCATCACCTTCATTATCACATTCAAAAAAGTTGTCTGAGGTTCCTCCAAAACGTTTCAAAGCTGAATCTGGGAGCAACAGTCCCAGCCCCAAACCGCACCATTCAAATTCACCTAAGTCTCCCAGACGCACACCAAATGgtGCAAATTCTGCAATCCTTGCAACTCATCGAGCAGGTTCGACAGAATTGTTGAATCCTGCCGCTCTAATTCCACTTCTTACATCTGAAATGGCATTGAGAATGGCTGCTGAGCTACCAGCTCTACAGAACTTGCCACAACCCCCTCAAGTCCTAGTGAAACAGGGTGTTTCAAAATGTCGTGAATGTAACATTGTCTTCTGTAAACATGAAAATTACATAGCACACAAAAGACATTATTGTTCTGCACGTTTGGAGAATACTAATGCATCTAATGAAGAGGGGGCAAATTTACCAAGTCCACTTTCAGTTGCCCATTCACCTTCTGGAATGAGTAACTCCAATCCAGCTAGTTCACCTACTAACAGCAATGGAAAAGAAACAAGAACAGTCAGCCCACCAGCAAATTTGCCTCCTGCTCAACAAAAAACACTGTTTCAGTTCATTTGTGGACAATGTGGCATTAAGTTCACATCACTTGACAACTTGAAAGCTCATCAAGCGTATTACTGCCCAAAAAGGGTTGAGTGTGCAAACATTAAAACAGAAACAACTAGTGAAAAACCAGCTAGGAAATGCCCCAAATGCAAGGTAATGGTTGCCTTAGAGCAATTAACTAGTCATCAATGTTCAGGGTCACTTGCAGGCAGTGGCTCAGGATGGAAATGTCCTTGTTGTGATACAATTAGTCCTACAGCCAGTGCAGCACAGAGACATATGGACACACACAGTGGCATTAAGGCATTTCGTTGTACAATCTGTCGCTATAAAGGAAATACCTTGCGAGGAATGCGCACACACATTCGTATGCATTTTGAAAAGAGAACAGCAGATCTACAGGAGGAAAATTATATAACCTGCATTACTGGAGAAGATAGCCAGCCAACGCCATATCCTCCTCCAGAAACTGCAATAGAATCAACAGCAGACAATACGCCAGCAGATGTGAGCAGAGTGGATAAACTTCATTTCTGTGAACTATGTAATTATAGTTCAACTTATAAAGGAAATGTTGTTCGACACTATAAGTTGGTACACAACAGAAATCATAGCAATTTGACAGAGGATTATAGTTCTTTGTCATCGTCATCCTCACAAGATACCAAAGCAGTTCCAGAAGTCGATATTCCTCCTACTCATCTGAGCCATTCTAATACAATGAGCTCATCACACACACCTGAAGATGGAAATTTTGGCAACAGTGGCAAGCAGGATCAgggcattaatttaatagtgaaACAAGAGAAGGTTGATAACCTTGAGAGTGATTCAGAAAGAGAGTCCTTGAAGGGTGACATAGACATAAATGCAGTGAAATCTGAGCCATCTTATCCATCTGATTCTGATGAAGTGAATCTTGTAATCAAATCACCAAAATTAGAAAGCCAAAGTGCTGAAGATTCTGATTTGATAGAAAGTGCAACAAATAGTGATGCATCTGAGACAAAGACAAAGGTATCAGGACCAAAATACTGTAAGTCATGCGATATTTCGTTTCAGTACCTATCAACATTCATTGCACACAAAAAGTTTTACTGTTCAAGTCATGAAGGTGAAAGTGCAGCCAATAATAGAACTTCAGAAACTCCTGTCCTTTAA
Protein Sequence: MLEWKAVTAAKSCTIKPANLLQNQHQQERKRSPTKGNLLVDLVARTVQPHGRRRASKRRNLLSFLLARAFGDSVSIRYNLPASLSRKKTSIIWLIVKWSGFLPVDVELWRAGADHLARVNTIKKGDDSPSHAALRHDFIRSNRLLKYEKCPVENRSTAVSKGQCTGIVQCLDYRPPGKYCSAPIGISNYQRFVVNPFHLERLADAADHSLIISSSRNLTAADESCSRGEDDEWTSDAEAAATPPASATATPPPPQEQSSHEEQQQTDQDSQEKQEQAPPPPPPRSPEDASPPRLRLNASLATDPALRSGPAPDVDFLSSIAPGGFPAALAASPFFCLPPLSEAGAILTPRTKAENLETPRQVVPVFTCSPCGIRFSSVSTLEAHQTFYCSHRLKNLKGRGDSDSEEGKTAGSSENMVMQGDESTATESTSEQNGLGPACKAARTGKQYACPHCSYSADKKVSLNRHMRMHSSSPVTAPAMNGIPGAGEGLSNSPEIAATLLNSPHLVDRYCQDCDIRFSSIKTFRAHKLHYCSTRHVVKAPPGVILSTPLPKTPSTVESAPTSPIDVISRSTPSPASVQDASHRNNPSNHLPPQPFLALPTNPILIVPYSLFQNASFLTGPAAMAMANQDAACILLPNGTLQPMAQGILSQSLSQSIPNSIQTQKMPVKEEITGSQSSRSSAQVTNTVVSPAAPLQQSKPQPAKISKIQRTAGDSALPLDLSIRRSSESGELVVDLGNEYDNEEEKENRRSIDNNSNICRIIGSSPDREDIVCAPSIPYMLSTSSTSSTPSPSAISPTSSPSLSHSKKLSEVPPKRFKAESGSNSPSPKPHHSNSPKSPRRTPNGANSAILATHRAGSTELLNPAALIPLLTSEMALRMAAELPALQNLPQPPQVLVKQGVSKCRECNIVFCKHENYIAHKRHYCSARLENTNASNEEGANLPSPLSVAHSPSGMSNSNPASSPTNSNGKETRTVSPPANLPPAQQKTLFQFICGQCGIKFTSLDNLKAHQAYYCPKRVECANIKTETTSEKPARKCPKCKVMVALEQLTSHQCSGSLAGSGSGWKCPCCDTISPTASAAQRHMDTHSGIKAFRCTICRYKGNTLRGMRTHIRMHFEKRTADLQEENYITCITGEDSQPTPYPPPETAIESTADNTPADVSRVDKLHFCELCNYSSTYKGNVVRHYKLVHNRNHSNLTEDYSSLSSSSSQDTKAVPEVDIPPTHLSHSNTMSSSHTPEDGNFGNSGKQDQGINLIVKQEKVDNLESDSERESLKGDIDINAVKSEPSYPSDSDEVNLVIKSPKLESQSAEDSDLIESATNSDASETKTKVSGPKYCKSCDISFQYLSTFIAHKKFYCSSHEGESAANNRTSETPVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00679024;
90% Identity: iTF_00679024;
80% Identity: -