Basic Information

Insect: Zhengitettix transpicula
Gene Symbol: Prdm15
Assembly: GCA_037074705.1
Location: CM073593.1:100653163-100663415[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 9e-05 0.03 16.4 1.9 1 23 415 437 415 437 0.97

2 7 9.5e-06 0.0032 19.4 1.3 1 23 443 465 443 465 0.97

3 7 1.6e-05 0.0054 18.7 5.9 1 23 471 493 471 493 0.98

4 7 0.0019 0.62 12.2 0.4 1 23 500 524 500 524 0.97

5 7 1.2e-05 0.0041 19.1 0.2 2 23 532 553 531 553 0.96

6 7 0.00043 0.14 14.2 3.6 1 23 567 589 567 589 0.97

7 7 0.00031 0.1 14.7 4.8 1 23 595 618 595 619 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	9e-05	0.03	16.4	1.9	1	23	415	437	415	437	0.97
2	7	9.5e-06	0.0032	19.4	1.3	1	23	443	465	443	465	0.97
3	7	1.6e-05	0.0054	18.7	5.9	1	23	471	493	471	493	0.98
4	7	0.0019	0.62	12.2	0.4	1	23	500	524	500	524	0.97
5	7	1.2e-05	0.0041	19.1	0.2	2	23	532	553	531	553	0.96
6	7	0.00043	0.14	14.2	3.6	1	23	567	589	567	589	0.97
7	7	0.00031	0.1	14.7	4.8	1	23	595	618	595	619	0.94

Sequence Information

Coding Sequence: ATGTTTGATGATTCCAACTTATGGTGTGACGATTGTGAGCACAGCAACAGTGGTGAATGTAATCAACACGGAGCTCTTATTGTTGTTCCAGACTCTCCCACTATAAGCCGAGCAAGACAGTCTCTCCCATCCATActagaaattaaaagaataaaagattCAAAGCAagggtTGTCAGTTTTTagtaaagaaaacattaaacgACGAACTCGATTTGGTCCGTTGCAAGCTCCTCTCAAATCAAAGTCACCACTTTCATCAGACAAAAGATCATTAGCTTTCAAACTGTTTGGCACTGATAAGGAGGCTGTTTGGTTCAACACTGAGCCTGGTAATGAAGATTTTTGTAATTGGATGGTGTTTGTTTCTGTGGCTAGAGCAGCTAAGGAACAAAATTTAGCAGCATTCCAATACCagtctggtatttattttgttactataaAGGATATTGCTGCTGGGGAGGAGTTACGTGTGTGGTACGCCAAGGAATATGCCGCCTGCATGGGAACCACGCCTCTACAAAAAACAGAAGCGGAGGAATCCTCACCTCCCAGGCAGCTGCGCCCTAGGCCTCAACCCACCTGCACAAAGTGCCAGCGGCAGCTGGCAACAGCCCGGACGGTGTGCATCTGTAGCTCCTCCCTGACCAAGGCTGTTCTGGCCCCTAGCAGGCGGGGCAGGAGGAGACGAAATCCTGCTGTCAGTGCAATGGCCTCAGAAGGAGATAAAAATCTATCAAATCCAGTTGTACCAGACAGTTCTGAAAGCAATGTTTCAAAACTTTCAGAACAAGAAACTAGTTCAGATTTGCCCCTGCAAGTGGTTATCAGGGAAGAGTTGAGTGATGTTGTGTTAGAAACAAGGTCTGTTGCAAAATTTAGTGGTAGTGAAATGATACATAATGTTGCAAGTGCCTTAAAAATGGTAGAGGATGATCCTCAGCATTCAAGACAGTCCTCCAGCtcagaattatttacaactgATTTGTCATTCCCAAGCACTTCACGTCAAGGTTTAAGGAGTAGTTCTTGGGAAGGGCACACAAGTCCTATTGAAGGTCAGCGCAATATCCGTTCTGGCAGAAAATCTGCAACAGATGAAGTTAAACGTCGAATGAGTACTTTTAAGAGTaagaaagatattaaaaatgaagaaaatattcaaagggCAATAGTTTCTAGTCAAGCTAGTTTATTAATGGAACGTAAGAGAGCAGCTAAGTCAACGACTTCACCAGGGCGACACGTTTGCCACGTATGTTCAAAAGCATTTGGCAGCCCTGGTAAATTAAGCCAACATATGTATTCACACACAGGGGAGCGACCATTTGAATGCACACAGTGCAAAAAGGCATTTTCTTCCAAGTTTAAATTAGTACGGCATGTTTTAATACATTCTGATGAGCGTAGGTATCGGTGTACAGTCTGTGAACGAACGTTTCATCGTAAAGACCACTTAAAAAATCATGTCAAAGTTCATAGCCctgtaaaaaaaacctatcGTTGTGAAAGAGATGGTTGTGGGAAAGAGTATAGCTCCTTTTTGAGCTTTAGAAAACATGTTGCAGTTCATGCTGCTGAGGAAGGTAACTTAGAATGCAAAATGTGTGGTAAAGTGTTTTCTACAAAAGAGGAAATTGTTTATCATCTAAAGGTGCATGCTGGCTCACGAACAGTGAAAAATCCTTCTGATAAGAAGTACAGGTGTGATCACTGTGAAAGAAAATTCTTTACAAGGAAAGATGTTCGACGCCATTTAGTTGTACATACTGGAAAGAGGGACTTTTTGTGTCAATTCTGTCCTCAAAGATTTGGGCGCAAAGATCACTTGGTACGCCATATCAAGAAAAGCCATCACACAGCTGGTAGTGGTCCAATGACCCGAGGTAGGGGTAAAAGGGTTCGAGTGCCAATGGACACTTCTCGAAGAAGTAATGTCACACCTTCGAGACCTTCAACTTCCAAAACTGTACCTGTATCTTCTGATTTAGAATATGAAGGTGATGATGCATCACTGTTGGGTGGACCCACTACCTCCTTCAGTGACATCAAAGAAGACAaggatgtaattattttagatgAAGAGGTCCAAAGTCAGGAGTCATTGAAAACTCAATCTATAGAAGCAATGTTGCAGGAATCTTCACCAGATAGTGattcaattatattgaaatcagAGCCATCACATCTGTCCTCAGGAGATAGATCAACTTGCACTGTGCACCATCGTCCTCAAACATCTGCTGGATCTGAAGCAGCTCTTTTAACTGAGTTGGTTTATGGACATACACATTCTGTACCTCCACCACCACCTCCTCCACCTTACCCAACTACAGCATCATATAAGCCTTTTGAACACACTGGTAATGTGAAGTTGGAATTTCCATCCCCAAGGATTTCTCAAGCCGAAGGGTCAATTGATATAAGTCAATATTTAAATCTAATGCCTTCAACATCTGCAGCTCATTTAGCTGATGACATCATTGATGAAGGTTCGGGAGAGGTTCAAGAAGAACTTCACAGATTTTTGTCCTCTAGTGATGCGAGCTTAGTATCTGATCCAAACATTTCCTCacaaattttgcatttaatggAATCTGCTGCCACTTCTCTAGACATCCCTAGCCCTGCAGCAGCTTCTCAGTCTGAAATGATGGCATCATTGCTTGAATCTACAGAGGATGTTCCAGGGACACCTACACCACTACCTCGCTTTAACCAGGCTTTTCAGCAGCAACAGCAACCACCACCACCATGA
Protein Sequence: MFDDSNLWCDDCEHSNSGECNQHGALIVVPDSPTISRARQSLPSILEIKRIKDSKQGLSVFSKENIKRRTRFGPLQAPLKSKSPLSSDKRSLAFKLFGTDKEAVWFNTEPGNEDFCNWMVFVSVARAAKEQNLAAFQYQSGIYFVTIKDIAAGEELRVWYAKEYAACMGTTPLQKTEAEESSPPRQLRPRPQPTCTKCQRQLATARTVCICSSSLTKAVLAPSRRGRRRRNPAVSAMASEGDKNLSNPVVPDSSESNVSKLSEQETSSDLPLQVVIREELSDVVLETRSVAKFSGSEMIHNVASALKMVEDDPQHSRQSSSSELFTTDLSFPSTSRQGLRSSSWEGHTSPIEGQRNIRSGRKSATDEVKRRMSTFKSKKDIKNEENIQRAIVSSQASLLMERKRAAKSTTSPGRHVCHVCSKAFGSPGKLSQHMYSHTGERPFECTQCKKAFSSKFKLVRHVLIHSDERRYRCTVCERTFHRKDHLKNHVKVHSPVKKTYRCERDGCGKEYSSFLSFRKHVAVHAAEEGNLECKMCGKVFSTKEEIVYHLKVHAGSRTVKNPSDKKYRCDHCERKFFTRKDVRRHLVVHTGKRDFLCQFCPQRFGRKDHLVRHIKKSHHTAGSGPMTRGRGKRVRVPMDTSRRSNVTPSRPSTSKTVPVSSDLEYEGDDASLLGGPTTSFSDIKEDKDVIILDEEVQSQESLKTQSIEAMLQESSPDSDSIILKSEPSHLSSGDRSTCTVHHRPQTSAGSEAALLTELVYGHTHSVPPPPPPPPYPTTASYKPFEHTGNVKLEFPSPRISQAEGSIDISQYLNLMPSTSAAHLADDIIDEGSGEVQEELHRFLSSSDASLVSDPNISSQILHLMESAATSLDIPSPAAASQSEMMASLLESTEDVPGTPTPLPRFNQAFQQQQQPPPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00678974;
90% Identity: iTF_00678974;
80% Identity: -