Ztra027151.1
Basic Information
- Insect
- Zhengitettix transpicula
- Gene Symbol
- -
- Assembly
- GCA_037074705.1
- Location
- CM073592.1:24947086-24962730[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.2e-05 0.004 19.1 3.3 1 23 477 499 477 499 0.98 2 16 0.065 22 7.4 1.5 1 19 503 521 503 524 0.94 3 16 0.002 0.65 12.1 4.5 1 23 532 554 532 554 0.98 4 16 0.0022 0.73 12.0 5.1 1 21 558 578 558 579 0.95 5 16 0.00035 0.12 14.5 1.2 2 23 588 609 587 609 0.97 6 16 2.4 8.1e+02 2.4 0.3 1 9 613 621 613 622 0.89 7 16 0.51 1.7e+02 4.5 0.7 2 23 646 668 646 668 0.90 8 16 0.0026 0.86 11.8 0.2 2 23 698 719 698 719 0.97 9 16 0.0076 2.5 10.3 1.3 1 20 724 743 724 745 0.93 10 16 0.00063 0.21 13.7 0.4 2 23 785 806 784 806 0.96 11 16 0.0061 2 10.6 2.7 1 23 811 833 811 833 0.95 12 16 0.00017 0.056 15.5 0.4 2 23 839 860 838 860 0.96 13 16 2.8e-07 9.3e-05 24.2 0.7 1 23 866 888 866 888 0.98 14 16 2.7e-05 0.009 18.0 1.9 2 23 897 918 896 918 0.94 15 16 0.00078 0.26 13.4 7.7 1 23 924 947 924 947 0.96 16 16 0.054 18 7.6 4.7 1 23 952 974 952 975 0.95
Sequence Information
- Coding Sequence
- ATGAACAATTTGACCAGAAAACCGAACCTCGCAAACAATGTCTTGAGGCAGGCTGGAATACCGAATCTCACACTTTCAGATTCTGAAGTAACACAGAAACTTGCACAGCAGCTTCCTGCTCAACAACTTGGTGCTCGTCACAGTCCTGAGAAATGGAAGTGTAAGGAGTGTGGCTCAGAAGAGAAAAGTGTAATTCCTTACTTTTCCACCACAAGTCAATTAACTGCAGAATCTATTCCTGAACAACAGTGTGAGAGTCTGGACGCTCTCCTAGAACAGTTGCAACGGGAGAGTAGTTCCACTGTAGATGGGAGTCAACTGCTGACTTCTATTGTGGAAAACAatgtattttctgaaaatgttcaaaaaagcAATGAACCACCTGGAGAAAGCTTGAACAACACAAGTGAGAAACAGAACAGTACCTTTGAAGACAACACATCTCTGATGCAGAATGGAACATCTTTAAGCAACCTGAACACTCCAGTTACTATTAGTTTAAGTGAATTTGATATTAAGACTGAAGAGAAACAgcagtcaaataaaaattgtgaaaatgtcATTGACCAGATTCCTGACTTGGGGAAAAATTACGAATATGTGGTCATACCATTGCAAGGTAGTTCAGTTGCAAACAACaacttaaaaacaattgatggtgAAAATATGGAACAAAACTCCGATAGAACAGTTACTTCAAAGTTACATCTTGAAGAAACATTACCTTCTTTGAGTACTATAATACTTtctggggtcaataattaccaACCagttaacacaataaatttaccaaattcaGAAGTAAAACATGTAAATCATCAGGACGTATCAGAGAACCAGAATATGGTTTCAAAAATTGTGCAAAATGTTGGAAATATGCTTGGCCTTGAGTTAGGATTAGTTATGAACCCTTGTCGTAGTGGTTCATCACTAATGGGCACTGGAACAGGGACTAGAATTGCTGAGGGTACAGGTAATGAATCGGTAATCTCTTCAGGTAACATTGGTGGTAATTATGATCATGGGGAGAcaacatttacttttaatgttGATGGCGTCCCAGTGTTTGCTACTACTGCAATGGAAGTGCTTGAagataatattgaaaacaaaatggaAACTGCAGAAGCTGTTATCACCAATTCAGGTGATGTACAATTAAGTATTGACAATGCAAATGGTTTAGAAGGTCAGCAACAAGTCGTTACAATTAGTTTTAGTATAAATGATGCCAATATTCTAATGGCAGATGCGGGTTCATCAAACATTGATAGCCTATCAGTAGATGCATTCAGCCAAAGCAAACCAACAGAATTTAGTGATTCTTCAAAGATTACACAGGACAAAGTAACCTCAGTGACACAAAACAATAATGAGAAGAAGCAAGTGACCACAAAGCAGCCAAATGTACTGGATACAGGACCTCCGTACAATTGTGACATTTGTGATAAAGAATTTCATAAGGCATCATATTTGTACCGACATTTAAGGAAACATACTGGGGAATTCACATGTGTTTCATGTTTCATGGTTTTTGCACGCAAAGAGAGCTTGCTCAATCATTCATGTTACACCAATGCAAATTCAAAAACATTTCCTTGTAATGTATGCTGTAAAAAGTTCACCTTAAAGAAAATGCTAAAAAGGCATATGGCCAAACATAATGGAACATACAAATGTAAGAATTGCCAACATTCTTACTCATCTCAAACAACACTTCAAGCTCACACTTGTCGAGCTTCAGCAACCAAGCAACCTTCTCGTTGTACAATCTGTTTACGTGAGTTTATGTTCCCAATGAACCTCAAACGTCATATGCAACAACATCGCAACTTGCACCCATGCAAAATATGTGGGCGAACTATCCTTGCAAATGCTAGTCAACATGAGGGTTATTGCACACAGgacaattttataaagaatgggGAGGAAGGTGTATGTCCAGAGTGCAATGATAAATTTTGTGATGTTGTTGAATTCAGATTGCATGTCTACCAACAGCATTCACATTGTCACATTTGTAACACTTGCAATGCAGCTTTTCGGACAGAGAAGTGTAAAGgtACACATCAGTGCAAGGAACTTATAGAAAAGTGCCAGTATTGTTCAGAAGAATTCAATTCTGTAATTGAATTagagaaacatttaataaatcatgGAGTGCCTGCGTTTCATTGTTTTGACTGTGGAAGAAGCTATCAGAATGCAGATTCTCTTATTGGACACACTTGTGAAGGAATTGATCTTCGTGCATTTtttgaaaagagaaaaaggtGTAAAAAGAAAACATCTCATAATAATTCTGATGGTGACAGTGCAATTATTAGCAAGAAATCAAACAGCCCATCATtggtttgtgaattatgtggaGAAATTTATAGAACTCATGGCAGCCTCTCTGTTCACAAGCAAATGCAtgGTGAAAGAAGATTTGAGTGTGAAATTTGTCACAAGAAATTCCACAGAAAAGATATAATGCAAGAACACCTTGCAGTTCACCAAGAACCTCAGATTCCCTGCCCAGTTTGCCAGAAAAAAGTCAAAACTAGGAAATCACTTGATGTGCACATGAAACAACATTTAGGAACTCGTCCATTCAAGTGTGATGAGTGTGGAAGGgaATTTTTTCAGAAAGGTAATTTACAGAAACATCTCCTAGTACACAATAATGTTGGTGGAAAGAAGCTTTCTTGCCaacattgtgataaaaaatttacttctcaaGAATATCTTGTGAGACATGAACTGGAACATACACAAGGACGCATTCATGCGTGTCACATCTgcaataaaggttttattaaaGAGCATTTGTTACGACATCACATAAAAACATTCCATTCTGGACAGTTGTTTGAATGTTCATTTTGTCCAGCCAAACTTAAACATCGGCAGTCAATGCAAAGGCATTTAGAGAGACACCATGAAAAAAGACGTAATGATTGGAGTGCACCTAACTTTATAGATTCCACAGCAACACCGATACATGAAAGTGTTGAGATTCAGAATGAAGGTGCTGAAATTTTGCTCACAATTTCTGAGATGCCACTCGATCAGGACATCCCTTGTGACATGCAAAGCACTGTTCAAGGAGAATCGGTTTCCATGCAGACTGAGGAAGTGCCTGTTCCGATGGgcaATGCTTTTATACTTGAAGATGGTACAATAATCCAAGAAGATGAGAGTGACTGTGGCAACATTGTATTCTATGTTTTAGATTCATCAGATATACAAACTGATTCTCAGTTCTag
- Protein Sequence
- MNNLTRKPNLANNVLRQAGIPNLTLSDSEVTQKLAQQLPAQQLGARHSPEKWKCKECGSEEKSVIPYFSTTSQLTAESIPEQQCESLDALLEQLQRESSSTVDGSQLLTSIVENNVFSENVQKSNEPPGESLNNTSEKQNSTFEDNTSLMQNGTSLSNLNTPVTISLSEFDIKTEEKQQSNKNCENVIDQIPDLGKNYEYVVIPLQGSSVANNNLKTIDGENMEQNSDRTVTSKLHLEETLPSLSTIILSGVNNYQPVNTINLPNSEVKHVNHQDVSENQNMVSKIVQNVGNMLGLELGLVMNPCRSGSSLMGTGTGTRIAEGTGNESVISSGNIGGNYDHGETTFTFNVDGVPVFATTAMEVLEDNIENKMETAEAVITNSGDVQLSIDNANGLEGQQQVVTISFSINDANILMADAGSSNIDSLSVDAFSQSKPTEFSDSSKITQDKVTSVTQNNNEKKQVTTKQPNVLDTGPPYNCDICDKEFHKASYLYRHLRKHTGEFTCVSCFMVFARKESLLNHSCYTNANSKTFPCNVCCKKFTLKKMLKRHMAKHNGTYKCKNCQHSYSSQTTLQAHTCRASATKQPSRCTICLREFMFPMNLKRHMQQHRNLHPCKICGRTILANASQHEGYCTQDNFIKNGEEGVCPECNDKFCDVVEFRLHVYQQHSHCHICNTCNAAFRTEKCKGTHQCKELIEKCQYCSEEFNSVIELEKHLINHGVPAFHCFDCGRSYQNADSLIGHTCEGIDLRAFFEKRKRCKKKTSHNNSDGDSAIISKKSNSPSLVCELCGEIYRTHGSLSVHKQMHGERRFECEICHKKFHRKDIMQEHLAVHQEPQIPCPVCQKKVKTRKSLDVHMKQHLGTRPFKCDECGREFFQKGNLQKHLLVHNNVGGKKLSCQHCDKKFTSQEYLVRHELEHTQGRIHACHICNKGFIKEHLLRHHIKTFHSGQLFECSFCPAKLKHRQSMQRHLERHHEKRRNDWSAPNFIDSTATPIHESVEIQNEGAEILLTISEMPLDQDIPCDMQSTVQGESVSMQTEEVPVPMGNAFILEDGTIIQEDESDCGNIVFYVLDSSDIQTDSQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -