Basic Information

Insect: Zhengitettix transpicula
Gene Symbol: -
Assembly: GCA_037074705.1
Location: CM073592.1:303368-311544[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0024 0.79 11.9 0.9 2 23 290 312 289 313 0.96

2 10 0.00079 0.26 13.4 1.6 1 23 318 340 318 340 0.98

3 10 1.7e-05 0.0056 18.6 2.9 1 23 346 368 346 368 0.96

4 10 0.0011 0.37 12.9 4.3 1 20 374 393 374 396 0.92

5 10 1.3e-05 0.0045 19.0 3.6 1 23 405 427 405 427 0.98

6 10 2.9e-05 0.0098 17.9 0.1 1 23 433 455 433 455 0.98

7 10 0.00014 0.048 15.7 1.4 1 23 461 483 461 483 0.93

8 10 1.6e-05 0.0052 18.8 0.8 1 23 489 511 489 511 0.98

9 10 0.00022 0.073 15.1 1.8 1 23 517 539 517 539 0.98

10 10 2e-06 0.00068 21.5 1.5 1 23 545 568 545 568 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0024	0.79	11.9	0.9	2	23	290	312	289	313	0.96
2	10	0.00079	0.26	13.4	1.6	1	23	318	340	318	340	0.98
3	10	1.7e-05	0.0056	18.6	2.9	1	23	346	368	346	368	0.96
4	10	0.0011	0.37	12.9	4.3	1	20	374	393	374	396	0.92
5	10	1.3e-05	0.0045	19.0	3.6	1	23	405	427	405	427	0.98
6	10	2.9e-05	0.0098	17.9	0.1	1	23	433	455	433	455	0.98
7	10	0.00014	0.048	15.7	1.4	1	23	461	483	461	483	0.93
8	10	1.6e-05	0.0052	18.8	0.8	1	23	489	511	489	511	0.98
9	10	0.00022	0.073	15.1	1.8	1	23	517	539	517	539	0.98
10	10	2e-06	0.00068	21.5	1.5	1	23	545	568	545	568	0.98

Sequence Information

Coding Sequence: ATGCTGTGTCGCCTGTGCGCCAACGAGAGGGAGAGCTTCGTGCGCATCTACGAGGAGGAGGGCCAGAAGCTCAACCTCGCCACCAAGATCATCCAGTGTCTCCAGATATGGCTGTATCCGGAGGACCCACTGCCCAAGACGGTGTGCATCGACTGCTGCGCCAAGTTGAACCAGTACTTTGACTTCTTCGAGACGACTTCTAGGGCACAACTGTCCTTGCAGATCCTCTTCAACCCCAAGATGGATAAGCATGAGCCCAAGGGTGAGCCCACGGATGTTGTTGCTGTCACCAAACTGGAGCCGCCTGATGGGGGTGGAGGTCGTGCAGGCGGAGGGGCCAGACGAGGAGAGGATGACGACGAAGAGGATGAGGAGGAAGATGAGGACGATGTGGGAGCAGGAGAAGAGGATGACAGAGATGCTGAACCTCCTGAGTTTGTGGAATGTGTTCTTTCAGACAAAGAAGGAAATAACATGGTGCAGCAAAGGAATGGAACAACCGCCACATCCCGTAGGAAACGCCGTGTTCCTGTCAAGAGGACACCCTCTGGAAAGCAAGGTGTGAGATCCAGGGAGAGGGCTTCCACCAGGAGCAGGTCTCGTGTCACCCGAAAGGAGAGGTCGGTGTCCCAGGAGAGAATCCCGCTCAAGGAGAGGTTGTTGCAGGTCAAAGCCCGATTGGAGCGGAAGGAGAAGGAACTGACTCCCCCAGTGGAGAGTGAGAAGGAAGAGGAGGATGAAGAAGAGGAAAAATATGAGTTGGAGGAGGCTGAAGAGGAGGATGGTGACAAGAAACGACGCAGGAAGAAGGACGCAGCTGAACCGAAGCCGCCGAGACCCAAGGCCGTGCTGGAGGGTTATCCTTGGCAGTGCACAGACTGCCCTGTAGTGTTGGCTTCTCTGCAGGAATTACGCAATCACCACCAGACCCTACATCACCAGCCACCCAACTTCAAGTGTGTGCAGTGTGCCAAGGTCTACACTCGTTACCGTAGCTTTGCACGCCATGTAAAACTGCACCGCAACCCTAAGAAGTTCAGGTGTGAGGAATGTGGCAAGTGCTTTTCACAGAAGACAGTTCTCCAGTCACATAGTACGGTGCACACTGATGCCCGACCACACGTTTGTCCACAGTGTGGGAAGGCTTTCAAACAGTTCAGCTCTCTTTACCTGCACAGCAAGTGCCACCTGCCAGACCAGGTCAAACCCAAGTTTCCCTGTGATATCTGCCATAAAGACTTTGCAACGAAGCACACACTTGAAACTCACCGCAAGATCCACACAGGTGAGCGAAACTTCATCTGTGATGTCTGTGGAAAGAGCTTCATTGCCAAGGGCAGCCTTGACTACCACATCCTCACACACTCTGGTGAAAAGCCACACCACTGCCCCGTCTGTGGCAAGGGGTTTAAGACAGCCCGGTTGTTAGGAAAGCATGCTACGTTGCACACTGGCATTAAGCCCCATCAGTGTGATGTCTGTGGAAAGCAGTTCCGGGAACGTGGTGCACTGAGGGAACACAATCGTATACACACTGGTGCCATGCCCTACACCTGCGAATTCTGTGGTAAAAACTTCCGCTTCAAGGGAATCCTCACGGTGCATCGGAGGCAGCACACAGGAGAGCGGCCTTACAGCTGTGCCGAATGCCGCAGGGAATTCACCAACTGGGCCAATTACAACAAGCACATGAAAAGGCGCCATCGGAACAATGAGGACCCCAACAGTGTTAACACCAACAGGAGCACAGCACGAACGTACCACCCTCCCTCGGGTGTCGTGGTGGGAAACGTCGGAGGCGTCGGCACTGCGGTTGGAGTGCTGCCTCCCAATGGTATCAAGATGAGCCTCCAGGCAAATGCCAATTCCGCTGCCGCAGCAGCTGTCGTCTCTGCAGCTGTGTCAGTGGCCTCACTGGGAGGTGCCTACAATCTCAGTGGTACTCATGTGGTGGGTGATGATGGCACTGTTATGGGTGGAGCAAACACCATGGGCGTTCCACAGCCAGGTCCTCTGTATCAGAACCACCAGAATGTCAGTTCTACTGTAGCTAAGATGGCGGTGTATGGCACCCACAGTACTGACAAAGTGGGAGATGTGTTCCACACCAGCGTGAATCACGTGGGAGCGAAAATGACCACCGCTGTAGGAGACGTGTACCATCAGCATCGGCCAGACGGTGGCCAGGAGGCAGTGGACAGGACTCCGTCACAACCAGATCTCGTGGGATCCTACCACGTTCCATCGTATGTTCCTGCTGGCCTGCCCATGGCCAGCATGGGATATTACATCCCACCCATACACCACACGGACCCGGGCATGGACATTTTGCACAATCGGATGGCGAACAACCAGTAG
Protein Sequence: MLCRLCANERESFVRIYEEEGQKLNLATKIIQCLQIWLYPEDPLPKTVCIDCCAKLNQYFDFFETTSRAQLSLQILFNPKMDKHEPKGEPTDVVAVTKLEPPDGGGGRAGGGARRGEDDDEEDEEEDEDDVGAGEEDDRDAEPPEFVECVLSDKEGNNMVQQRNGTTATSRRKRRVPVKRTPSGKQGVRSRERASTRSRSRVTRKERSVSQERIPLKERLLQVKARLERKEKELTPPVESEKEEEDEEEEKYELEEAEEEDGDKKRRRKKDAAEPKPPRPKAVLEGYPWQCTDCPVVLASLQELRNHHQTLHHQPPNFKCVQCAKVYTRYRSFARHVKLHRNPKKFRCEECGKCFSQKTVLQSHSTVHTDARPHVCPQCGKAFKQFSSLYLHSKCHLPDQVKPKFPCDICHKDFATKHTLETHRKIHTGERNFICDVCGKSFIAKGSLDYHILTHSGEKPHHCPVCGKGFKTARLLGKHATLHTGIKPHQCDVCGKQFRERGALREHNRIHTGAMPYTCEFCGKNFRFKGILTVHRRQHTGERPYSCAECRREFTNWANYNKHMKRRHRNNEDPNSVNTNRSTARTYHPPSGVVVGNVGGVGTAVGVLPPNGIKMSLQANANSAAAAAVVSAAVSVASLGGAYNLSGTHVVGDDGTVMGGANTMGVPQPGPLYQNHQNVSSTVAKMAVYGTHSTDKVGDVFHTSVNHVGAKMTTAVGDVYHQHRPDGGQEAVDRTPSQPDLVGSYHVPSYVPAGLPMASMGYYIPPIHHTDPGMDILHNRMANNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -