Ztra052501.1
Basic Information
- Insect
- Zhengitettix transpicula
- Gene Symbol
- ZEB2
- Assembly
- GCA_037074705.1
- Location
- CM073596.1:59976872-59984034[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 3.5 1.2e+03 1.9 0.1 3 23 6 26 5 26 0.80 2 15 6.7 2.2e+03 1.0 2.7 1 23 533 556 533 556 0.83 3 15 0.00017 0.056 15.5 0.3 1 23 651 676 651 676 0.95 4 15 0.00024 0.081 15.0 0.8 1 23 687 709 687 709 0.97 5 15 7.7e-07 0.00026 22.9 2.0 2 23 712 733 711 733 0.97 6 15 3.6e-06 0.0012 20.7 0.7 1 23 739 761 739 761 0.98 7 15 5.8e-06 0.0019 20.1 1.0 2 23 768 790 767 790 0.96 8 15 0.072 24 7.2 3.0 5 23 803 821 802 821 0.96 9 15 0.00024 0.081 15.0 0.7 2 23 827 849 826 849 0.96 10 15 0.033 11 8.3 0.1 2 23 865 885 864 885 0.93 11 15 1e-05 0.0034 19.3 0.9 1 20 891 910 891 913 0.92 12 15 0.00045 0.15 14.2 1.8 1 23 921 943 921 943 0.99 13 15 0.043 14 7.9 9.1 1 23 949 971 949 971 0.98 14 15 1e-05 0.0034 19.3 3.9 1 23 977 999 977 999 0.98 15 15 0.00071 0.24 13.5 6.2 1 23 1005 1027 1005 1028 0.96
Sequence Information
- Coding Sequence
- ATGGATCTGGTGGCTTGCCCCGTGTGTACTCTGTACATGCGTGAAGGCGTTACATTGCAAAGCCATCTCAACACGCATCCAAAAGATCAGGTTATAGAAGCTTTGGTCAGGTGCTCTGTCAACGGTGTCGGTATTAAAGATACCGAAAATGGTCCCACTTCCATACCTTCTAACCAACAAGATGTTGCTCGTGTACAAAACTCCCAGTATCCATCTCTAGGTAGTAGCCACTTCACGGCAGCTATAACCTACCAACAATTTTTAAGCAGTAATTCGGCTGGGGTGTTCCCGCAGTATGTCTCTGTTCCAACTATCCTGACGCCAGCCGATACTAATTCCAATGCGAACCAAGGGACCTTGATGCCTGTTTTGTACAACCCATATATTCTACAGCAACACCAACACCAACTACAGTTTGTCAATTCTATAAACAGTCAGCCTCTGATTCCTCAAGTGTCTTTTGGAAACTCATCGGTGACACAGGTGAATCCCTTGCCCATGAATGCGGTGGGTCAGTCATTATTACGCCCACTTTCTGCTTCTAATGTGTCCCAAATTAATCAAGTTACTCAAACTTTGAGGAGTCCCACTTTGTCTTCAAATTCTCCAACTCGTAGGGTTTCAAGGTCAGATTTATCTTGTCAAGTAGGCAAAGATGATAGTGGACAGGACGATGATTCTGAATCAATTGAAGCCAATAAAAATGTGAGCAAACAGTCTAGTCTTTCACCAAAATCAAACTCAAGTccagatgatgatgatgatgatgaggGTTGTGAAGTTGATGTTAAAActgatgtaaatatttcaaatgacaCTTTGGTACGTTCTCAACGTATGCGGCGTGTATTGAATGATGGTTGTGTGGGTGAAGAAACTGAACTTGTTGAGGTGAACAGTATACAACATTACGAGTCTACAGGTGTAGAACGgtattctcaaataataaaagaagacAAAGATGATCAAGACTTCCAGCAAATTGTGAACGGCAGCGATCATAGGAATTCGAGCGATGAGAGAAATGAATATGACTCTAGAAAAATGAGAGGTGAGTGCACGGGGAAAAGCCATTCCCAACAAGTCTCTTACGTAACTTCTGTAGGAAAtggtaaattaatgaatttggagACATCTGCCTCTCTTAATGTTATTGAATTTGAAGGTGTGAATATTTTAGTACCAACACATTTTCTAGATAATTCCAGTGTCATTGAAGGTCACAAGCTGACTGTGATAGAACAAACATCCGAAGTTACAACTATGGAGGTTCCTAGCCTTCAATTACTGAAATGTGAAAATTCTCCTCAGTCAAATGTCAATATACAGTCTGATGAAATTATGCCAGCAAGAGGAGAACTTTCTGAACAAGAGAGTCTTGGAGGAAATGAAAATTCTGTCTGGATACAGaATTATGCTGAAGCAGAAGAGGAAGTTTCAACATCCTATGATTTAATAGCTCAAGAAAGTTGGGAAGCCTCTGATGGTTCAGACACTGAAACATATATGGAACCTTTTGAGAAACAATGTTCAGAACTTGATCAAAAATCTAACACAGATTTTGCCACTAAAACCaatgttaaaatgaagaaaatttatacttgCTGGTCATGCCAAGAATCATTTAACTGTCCCAAGGAGAGAAGGGTACATCGCACATTATACCATTCTGATGACGGAGAAAATAAAAAGCCACAAGAGGACATACTGAAAACTGATATTGTAATAGAagacaatattataatagaagacAGTGTTAAtgaaaatgacattaaaattgaagAGGGAGTAGAAATAAATCTAGAAAGCAAAACATCCATTGGAATTGAAATAAAGAAGACTGAAACCAAAACTATAGTCATCAAAACAAAAGAGAATGGAAATTTTGGTACTGTTGCGAAAGCTAAACGAAAATCAGCAGCAGAGGTTAGGAAAGTTGAAACTTCAAAACATACATGTGAAGTTGAACTATGTTCAGAGACTTTCACATCACCAGAGCTTTTGCAAAACCATTTAAGTACTGCTCACAAAACTAAGCAGGAATCAAGAAGGGGCCGGCATGTGTGCGGTACATGTAATGAAGTTTTTCGAACAGAAGTACTTTTTCGGGAACATCTTAAGATTCATCCACTTGAATGCTCTTATTGTGGAAAATTTTTTTCTAGGAAACAAAATCTCAGTTTGCACTTAAAGCGCCATTTGGGTATCCGACCTTACAAATGTGCTATCTGTGATAAATCATTCATTACTAAACAGAAGCTAGCTGAACATACCAATTCTCATACTGGAAATTCACCTGTGGAATGCACACTTTGCAATGAATCTTTCCGGCGTTATAGTAATCTCATACAGCACCGAAATAGATATCACTTGAAGTTAAAGAAAAagataaaagattatatttgcCATTGTGGAGAAGTATTTCATTCAAAGAAGAAATTGGAGTGGCACAAGGAGATCCATGATGCAAAACCCAAATCGTGCCCATATTGTATTGAACGATTTGTACATGCTGTCAGCCTTACTAGGCACATCCGAAGAGCCCATGATAATCGCTATGTTCCCATAAGGGATAGAGAAGGGGAGAATGTACAGTGTGCGGTTTGTTCTTCATTTTTCTTGCGATCATCATTGGCTGCTCATATGCGAGTTCACTCTGGTGAACGACCTTTCCCATGTCAAATTTGTGGTAGAAGATTCACTACCAAATGGAACCTCAAGCTACATAAGTGGACACATGCTGCTAGGTCATCAAAACCATACAAGTGTGCCACCTGTAAAGCAGCGTTTTACCGTAAATCAAGTTATCTTGATCACTCACGAACCCATCGTGGCATAAAACCATATACATGCAATTATTGTGGCTGCCGatttatacacaaatttaaCTGTTTGCGCCATGTTCGTgaacatgaaacaaaaaaaagttatgtttGTACTATCTGTTCCAAAACTTTTCATAGGAGATATTACTTGAAAGAACACATGACAGTTCATAGTGGTGCAAGACCATACTCATGCCACATTTGTGGCAAAGCATCATCTacaaaatcaaatcataataaACATGTGAAAATTCACCATGCACGTGAGCCAGTTAATACAGAAGGTTAA
- Protein Sequence
- MDLVACPVCTLYMREGVTLQSHLNTHPKDQVIEALVRCSVNGVGIKDTENGPTSIPSNQQDVARVQNSQYPSLGSSHFTAAITYQQFLSSNSAGVFPQYVSVPTILTPADTNSNANQGTLMPVLYNPYILQQHQHQLQFVNSINSQPLIPQVSFGNSSVTQVNPLPMNAVGQSLLRPLSASNVSQINQVTQTLRSPTLSSNSPTRRVSRSDLSCQVGKDDSGQDDDSESIEANKNVSKQSSLSPKSNSSPDDDDDDEGCEVDVKTDVNISNDTLVRSQRMRRVLNDGCVGEETELVEVNSIQHYESTGVERYSQIIKEDKDDQDFQQIVNGSDHRNSSDERNEYDSRKMRGECTGKSHSQQVSYVTSVGNGKLMNLETSASLNVIEFEGVNILVPTHFLDNSSVIEGHKLTVIEQTSEVTTMEVPSLQLLKCENSPQSNVNIQSDEIMPARGELSEQESLGGNENSVWIQNYAEAEEEVSTSYDLIAQESWEASDGSDTETYMEPFEKQCSELDQKSNTDFATKTNVKMKKIYTCWSCQESFNCPKERRVHRTLYHSDDGENKKPQEDILKTDIVIEDNIIIEDSVNENDIKIEEGVEINLESKTSIGIEIKKTETKTIVIKTKENGNFGTVAKAKRKSAAEVRKVETSKHTCEVELCSETFTSPELLQNHLSTAHKTKQESRRGRHVCGTCNEVFRTEVLFREHLKIHPLECSYCGKFFSRKQNLSLHLKRHLGIRPYKCAICDKSFITKQKLAEHTNSHTGNSPVECTLCNESFRRYSNLIQHRNRYHLKLKKKIKDYICHCGEVFHSKKKLEWHKEIHDAKPKSCPYCIERFVHAVSLTRHIRRAHDNRYVPIRDREGENVQCAVCSSFFLRSSLAAHMRVHSGERPFPCQICGRRFTTKWNLKLHKWTHAARSSKPYKCATCKAAFYRKSSYLDHSRTHRGIKPYTCNYCGCRFIHKFNCLRHVREHETKKSYVCTICSKTFHRRYYLKEHMTVHSGARPYSCHICGKASSTKSNHNKHVKIHHAREPVNTEG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00678945;
- 90% Identity
- -
- 80% Identity
- -