Basic Information

Insect: Zhengitettix transpicula
Gene Symbol: L
Assembly: GCA_037074705.1
Location: CM073594.1:73874663-73879001[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.12 39 6.6 5.9 1 23 3 25 3 25 0.98

2 20 6.1e-07 0.0002 23.2 4.1 1 23 31 53 31 53 0.99

3 20 9.8e-06 0.0033 19.4 0.2 1 23 59 81 59 81 0.98

4 20 6.1e-06 0.002 20.0 0.2 1 23 98 121 98 121 0.97

5 20 0.0021 0.69 12.1 0.1 1 22 192 213 192 215 0.89

6 20 0.3 99 5.3 0.2 3 23 262 282 261 282 0.98

7 20 0.0047 1.6 11.0 0.0 2 23 291 312 291 312 0.94

8 20 0.00066 0.22 13.6 0.4 3 23 322 343 320 343 0.93

9 20 0.12 39 6.6 0.1 1 23 348 371 348 371 0.92

10 20 2.2 7.4e+02 2.5 0.2 1 13 431 443 431 453 0.77

11 20 0.0027 0.91 11.7 3.2 1 23 457 479 457 480 0.96

12 20 0.0017 0.56 12.4 4.6 2 23 583 604 582 604 0.96

13 20 0.031 10 8.4 0.5 1 23 616 638 616 638 0.97

14 20 0.045 15 7.9 0.1 2 23 646 667 646 667 0.97

15 20 0.038 13 8.1 0.2 1 23 741 764 741 764 0.91

16 20 0.0065 2.2 10.5 3.6 1 23 775 797 775 797 0.96

17 20 0.0061 2 10.6 0.0 1 23 805 827 805 827 0.97

18 20 1.3 4.2e+02 3.3 1.1 1 23 834 856 834 856 0.93

19 20 0.00018 0.06 15.4 0.3 1 23 910 933 910 934 0.95

20 20 4 1.3e+03 1.7 0.1 1 20 948 967 948 971 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.12	39	6.6	5.9	1	23	3	25	3	25	0.98
2	20	6.1e-07	0.0002	23.2	4.1	1	23	31	53	31	53	0.99
3	20	9.8e-06	0.0033	19.4	0.2	1	23	59	81	59	81	0.98
4	20	6.1e-06	0.002	20.0	0.2	1	23	98	121	98	121	0.97
5	20	0.0021	0.69	12.1	0.1	1	22	192	213	192	215	0.89
6	20	0.3	99	5.3	0.2	3	23	262	282	261	282	0.98
7	20	0.0047	1.6	11.0	0.0	2	23	291	312	291	312	0.94
8	20	0.00066	0.22	13.6	0.4	3	23	322	343	320	343	0.93
9	20	0.12	39	6.6	0.1	1	23	348	371	348	371	0.92
10	20	2.2	7.4e+02	2.5	0.2	1	13	431	443	431	453	0.77
11	20	0.0027	0.91	11.7	3.2	1	23	457	479	457	480	0.96
12	20	0.0017	0.56	12.4	4.6	2	23	583	604	582	604	0.96
13	20	0.031	10	8.4	0.5	1	23	616	638	616	638	0.97
14	20	0.045	15	7.9	0.1	2	23	646	667	646	667	0.97
15	20	0.038	13	8.1	0.2	1	23	741	764	741	764	0.91
16	20	0.0065	2.2	10.5	3.6	1	23	775	797	775	797	0.96
17	20	0.0061	2	10.6	0.0	1	23	805	827	805	827	0.97
18	20	1.3	4.2e+02	3.3	1.1	1	23	834	856	834	856	0.93
19	20	0.00018	0.06	15.4	0.3	1	23	910	933	910	934	0.95
20	20	4	1.3e+03	1.7	0.1	1	20	948	967	948	971	0.77

Sequence Information

Coding Sequence: ATGCCGTTCAGATGCGAGTTCTGCAGCCGGCTGTTCAAGCACAAGCGCAGCCGAGACCGACACATCAAGCTGCACACTGGGGACAAGAAGTACCGCTGTTCCCACTGCGAGGCCGCCTTCTCCCGCAGTGACCACCTCAAGATCCACATGAAGACGCACGACAACCAGAAGCCCTTCCAGTGCACCGTCTGCAACCGCGGCTACAACACTGCGGCGGCGCTCACGTCGCACATGCAGAACCACAAGAAAGAGAGCGTGGGCGGCGCCGGGACGCCCAGCCCGGGGTCGACGTTCCGCTGCCTCTCCTGCGGAGAAGCCTTCCGCAAGCCCGATGACCTCCAGAGCCACATGGCGACTCAGCACGGATCCCCGACGTCGCTGCTGGGGGCGACGCTGCTGACGCCCAAGCTGGCGTGCATCTACTGCACCAAGGACAGCTTCACCACGATGGAGGCGCTGCAGCTGCACGTGCAGGCCATGCATGGTGCCATCGTCAACGGCGACTTCTCCTCCCCCGCGGCCAGTCCGCAGGCGCCGCCGCCAACGCCCCCACCGCCGCCTCCGTCCCTGCCGTTCGCGTGCGACCTGTGCACGATGCGGTTCGCGTCTCCCTCGGGGCTGCACAAGCACGCGGCGGCCGTGCACTGCGCAGAGCAGCTGCGGCCCACGGACCTGAGCAAGAAGAGCCGCGCCTCCCACCACAGCCCGCCCGCTGCCAAGCGCCTGCGGGGCGGCGCCGAGCCTCCCCCAACCGCCCCTTACGACCACCCGGGAACGCTGCTGTGCAACCAGTGCAGCGCCGCCCTCCCGGACTTCGAAGCCTTCCGCACGCACCTCAAGTCGCACCTGCTGGAGGAGACTGCGGGGGCGGTATGTCGGCACTGTGGGGCGGCGTTCGCGGGTGCAGAAGCGCTGTGGCGACACGTGGGGTCGCACTTCCTGGCCACCGCCTCCGAGTTCGGTTGCCAGAGCTGCCTCAAGCAGTTCCGCCAACCCGACGACCTGCAGCGCCACCTGCTCGAGCTGCACGCGCTGCACCTGTACCGCTGCTCCCTCTGCCAGGAGCTGTTCGAGTCCAAGGTGGCCATCCAGGTGCACTTCGCCGTCGCCCACAGCAGCGAGAGTCGCCTCTTCCGCTGCACGGCGTGTCCGGGGGCGGCGTTCCGCGCCGAGGCGGACTTTGCGCTGCACGTGCGCGCCGCCCACGCGGCTTCACCCGCCCCCGCCACGCCACCATCGCAGCAACAGCCCCCGCCGCCCGCTCAGACCGCAGCCCCACAGCAGCCGCCCTTCCGCTGTCTGTACTGCCGTCTCAGCTTCGGCAGCGAGCTCGAGATGCAGTTCCACCTCGCCGCCCACTCCAAGCAGTTCCGCTGCCCCGTCTGTCACGAGGCCTTCCACGTCGAGTTCCTGCTCGACAAGCACATGGCCTCCCACCACGCCGCCCAGATCCTGAACGGCAACTCGTCGACGCCGGAGAACCTGAGTCACCTCCAGCAGCCGCAGCAGAAGTCCCCCAAGAGCAAGACCGCCCCCGTAAGGACGAGCAGCGGCGGCAGCACCAGCAGCGATGCCCCCACATCCGGCGTGGGCGACGCCGAGCTCTCCTCCGACGCGACCTCCGTCGGTGTCGCCAACACAACATTGGACAAGCTGTCCGGTGGCGTCGGAGGAAAGGTCAAGGGTGCCGGCGGGGGCGGCGCTTCCAAGGGCGGCGGAGGCGGCGCGACGGCGGGCGTGAGCCTGCACTGCGCCTACTGCAGCGAGAACTGCAAGTCACGCACCGAGCTCGAGAACCACATGAAGACTCACTCGCAGGGCGGCGCCGGGGGCGTGGGCGGCAAGCACAAGTGCAACATCTGCGACGAGCTCTGCCCCTCGGCGGCGGTGCTGGCCGAGCACAAGCTCACGCACTGCAAGGTGGTTTCGGGCAACAGCTGCACGCAGTGCAAGGCGGCGCTGGCCTCAGAGGACCAGTTCGTGGCCCACCTACGGCAGCACGGGGGAGGCGGCGCGGGCGCTGGGGAGGCCGTGACTCTGCCGACGCCGTGCGTCGTGTGTCGCCAGACGCTCATGTCGGACGTGGAGGTGCGCGTGCACGCCAAGTTCCACCTGCAGCAGCCCCCGCCGCCCCCGCAAGGGCCGCAGTGCTGCCTGTGTCTGCGCGCCGTGGACCTGCCCGGCCTCTGTCCCGACTGCGCCGCCCCCAGGAAGGCGGCCTTCCGCTGTCTGCACTGCGCCGCCAGCTTCGACAGCGAACGCGACGTGCAGCGCCACGTGGCCGGCGCGCACAGCAtggcgggggcggcggcggGGGAGCGACACGAGTGCCACCTGTGCCGACGCTGCCTGGACTCCCCGCGCCAGTTGCAGGCCCACCTCATCGAGCACACGTTCGCGGGCTGCGGCTCCTTTACGTGCTACCTGTGCAGCGCCGTCTTCACCGCCGCCCCAGGCCTGCAGCAGCACATGCTGGCCCACGGCCCCAACGCCAAGCCCTACGACTGCGCCAGGTGCAGCCTCCGCTTCTTCTTCCGCGCTGAGCTGGACAACCACAGCTACAGCCATCTGGAGCGCGACGAGGAGCTCGCCACCAAGTGTTGTTTCGTTGCCTTGCTGCTGCAGATGGCCTACTACCAGCACCTCAACAACAACGGCACGTCCGAGGTCGACGCCAAGGGCCGCGGACTTGCCCCTAGCAAGGGCGGCGGGGGCAGGAAGGGCGGCCACGCGTGCGTGGACTGCGGGAAGGAGTTCTCCGCCGCGCGGGGGCTGGCGTCGCACGTGCGCACGGCACATCACCACGGGGGCGGCGTCGTGGTGGTGAAGCGCGTGGGCGTCCACGCGTGCGGCGTCTGCAGCAAGGAGTTCCTCGACGTCGAGACGCTGGACTCGCACGTGGCGGCGCTGCATCCGCTCCCGGTCAAGCAGGAGCCGCCCTCGCCGCCGCCCACCGTCGCCGCCCCCGACAAGGACGAGTAG
Protein Sequence: MPFRCEFCSRLFKHKRSRDRHIKLHTGDKKYRCSHCEAAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKKESVGGAGTPSPGSTFRCLSCGEAFRKPDDLQSHMATQHGSPTSLLGATLLTPKLACIYCTKDSFTTMEALQLHVQAMHGAIVNGDFSSPAASPQAPPPTPPPPPPSLPFACDLCTMRFASPSGLHKHAAAVHCAEQLRPTDLSKKSRASHHSPPAAKRLRGGAEPPPTAPYDHPGTLLCNQCSAALPDFEAFRTHLKSHLLEETAGAVCRHCGAAFAGAEALWRHVGSHFLATASEFGCQSCLKQFRQPDDLQRHLLELHALHLYRCSLCQELFESKVAIQVHFAVAHSSESRLFRCTACPGAAFRAEADFALHVRAAHAASPAPATPPSQQQPPPPAQTAAPQQPPFRCLYCRLSFGSELEMQFHLAAHSKQFRCPVCHEAFHVEFLLDKHMASHHAAQILNGNSSTPENLSHLQQPQQKSPKSKTAPVRTSSGGSTSSDAPTSGVGDAELSSDATSVGVANTTLDKLSGGVGGKVKGAGGGGASKGGGGGATAGVSLHCAYCSENCKSRTELENHMKTHSQGGAGGVGGKHKCNICDELCPSAAVLAEHKLTHCKVVSGNSCTQCKAALASEDQFVAHLRQHGGGGAGAGEAVTLPTPCVVCRQTLMSDVEVRVHAKFHLQQPPPPPQGPQCCLCLRAVDLPGLCPDCAAPRKAAFRCLHCAASFDSERDVQRHVAGAHSMAGAAAGERHECHLCRRCLDSPRQLQAHLIEHTFAGCGSFTCYLCSAVFTAAPGLQQHMLAHGPNAKPYDCARCSLRFFFRAELDNHSYSHLERDEELATKCCFVALLLQMAYYQHLNNNGTSEVDAKGRGLAPSKGGGGRKGGHACVDCGKEFSAARGLASHVRTAHHHGGGVVVVKRVGVHACGVCSKEFLDVETLDSHVAALHPLPVKQEPPSPPPTVAAPDKDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00678928;
90% Identity: iTF_00678928;
80% Identity: -