Basic Information

Insect: Zhengitettix transpicula
Gene Symbol: -
Assembly: GCA_037074705.1
Location: CM073591.1:149859130-149860794[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.066 22 7.3 0.1 2 19 46 63 45 66 0.92

2 15 2.5e-05 0.0084 18.1 4.5 1 23 75 97 75 97 0.90

3 15 0.0061 2 10.6 0.3 2 23 103 125 102 125 0.89

4 15 0.0002 0.068 15.2 0.5 3 23 133 153 132 153 0.98

5 15 1.9e-05 0.0062 18.5 2.1 1 23 163 185 163 185 0.98

6 15 0.0001 0.034 16.2 0.3 2 23 192 213 191 213 0.91

7 15 2.8e-05 0.0094 17.9 0.3 1 23 219 241 219 241 0.98

8 15 0.0023 0.77 11.9 0.1 3 23 249 269 248 269 0.98

9 15 0.0012 0.39 12.9 1.3 1 23 309 331 309 331 0.99

10 15 5.9e-07 0.0002 23.2 0.9 1 23 337 359 337 359 0.98

11 15 0.00098 0.33 13.1 1.7 1 23 365 387 365 387 0.97

12 15 0.01 3.5 9.9 0.8 1 20 393 412 393 415 0.94

13 15 2.4e-06 0.00081 21.3 2.2 1 23 421 443 421 443 0.99

14 15 5.2e-07 0.00017 23.4 2.6 1 23 449 471 449 471 0.98

15 15 0.00078 0.26 13.4 3.0 3 21 485 503 484 504 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.066	22	7.3	0.1	2	19	46	63	45	66	0.92
2	15	2.5e-05	0.0084	18.1	4.5	1	23	75	97	75	97	0.90
3	15	0.0061	2	10.6	0.3	2	23	103	125	102	125	0.89
4	15	0.0002	0.068	15.2	0.5	3	23	133	153	132	153	0.98
5	15	1.9e-05	0.0062	18.5	2.1	1	23	163	185	163	185	0.98
6	15	0.0001	0.034	16.2	0.3	2	23	192	213	191	213	0.91
7	15	2.8e-05	0.0094	17.9	0.3	1	23	219	241	219	241	0.98
8	15	0.0023	0.77	11.9	0.1	3	23	249	269	248	269	0.98
9	15	0.0012	0.39	12.9	1.3	1	23	309	331	309	331	0.99
10	15	5.9e-07	0.0002	23.2	0.9	1	23	337	359	337	359	0.98
11	15	0.00098	0.33	13.1	1.7	1	23	365	387	365	387	0.97
12	15	0.01	3.5	9.9	0.8	1	20	393	412	393	415	0.94
13	15	2.4e-06	0.00081	21.3	2.2	1	23	421	443	421	443	0.99
14	15	5.2e-07	0.00017	23.4	2.6	1	23	449	471	449	471	0.98
15	15	0.00078	0.26	13.4	3.0	3	21	485	503	484	504	0.94

Sequence Information

Coding Sequence: ATGAAACATAGTAAGGAAAGTAATTTTGCTGGTAATACTACAACTAATATAACTGTTATAGAGGGCATAGATGATGACTCTAGTAATGATTGTGACGAAGATTTACTTGAAGATCTTCCTCCAGGAGTAATATTGTCTTGTTCAGATTGTGGTTACATAACTCCTTCCAAAGTTGAGATGGAAGCACATTCTTGCCAAGAGGAACTGGGACAGCAACCAAAATTTCATTGTTCTGATTGTAATAAGAGTTTCTCTCGTCAAGACTCTCTTCAAATACATTGTTTGATACATGCTGAGAAACCTTGGAGCTGCCGGCAGTGTGAACAAAGTTTTGAGAGCCGTGATACACTATCTGTACATGAAATTGAAAAGCATTCGGACTCAAGATCTTGGTTATGTGATctatgtggaaaaatatttcctcatATCATGCAACTTCGAATTCATAGACGGGCTCATGTTGAGGTGCCTCAACAAATGCGTAGATTTCGTTGTGAGAAATGTCCTCGTCTATTTCGTAACCGTTTCCTTTTGCGAACCCATATGCAAGAACATAATGCAGAAAAACCGGTTATGTGTGAGGTGTGTGGTTTAACTTTCTCAGATCAGAAAACTCTTGAACAACATTCAAGTTTTCATAATGATGCTAAAGCATTTGAATGTGGCATTTGCAGTCTTGTGTTTGAACGTAAAGTTGGCTTGACAAAACATTACAAACTTCAtagtgaagaaaatattgtagCGTGTCGCATATGTAAAGCAACTTTTCCGTCTGTTGCAGGACTTTTAAATCACCGTAAAACACACACACCTGAAGAATGGGAGTCAGCAAGGCAACAGTGTAAGACAGTTCCACATTCAAGTAGACCCCAACAGTACAAATCAGTGCCACATACAACTTCACAGCCCCCATCACCCAAAAGCTATCGTTGTTCTCGTTGTAGCAAGCTTTTATCTTCTAAGCTATCACTATCATTACATATGCGAGtccatacaggtgaaaagccatttgaGTGCCTTATATGCAACAAACGATTTACTCAGAAGCCAGCTTTAACTTACCACATGCGTCTTCATACAGGTGAACGTCCACATACTTGCCAATTTTGTGGCAAGGGTTTTAATTCCAAAGTAGGGAAAGAAAGTCATGAACGTATCCATACAGGAGAACGACCTTACCGTTGTGGTCAGTGTGGTGTTGGCTTTCGGTGTTCAGCAAATTTGCGACAGCATACGTGGATACACACTGACTCAAGACCTTTCACATGTGAAATTTGCTGCAAACCATTCAGACGCCGTGAGGCACTTCAAGTACACATGAGAACACACACAGGTGAGAGACCATACTCATGCCCACTGTGTGGTCGATGCTTTACTCAGAAAGGTGACATGTTGAAACATACAAGGTCACATGACAGGCCAGGTCGAGGCACAGTCACTCCAGCAGCAGCGTGCAGTACCTGTGGACAAACATTTGCACAAAGAAAGCATTTCAAAGCACATCGTTGTTTATTAGGAGGACCAAAGAATGAAAATGATGAAGTAACTATTGCTGCAAATGATGTCATATCATTTCCAGAAATTACTGTCGTCAGTAATGATATGCAAGATTTtgaggtaaatataaatattcacaattgCCATTTACCACAAATATTTcgttaa
Protein Sequence: MKHSKESNFAGNTTTNITVIEGIDDDSSNDCDEDLLEDLPPGVILSCSDCGYITPSKVEMEAHSCQEELGQQPKFHCSDCNKSFSRQDSLQIHCLIHAEKPWSCRQCEQSFESRDTLSVHEIEKHSDSRSWLCDLCGKIFPHIMQLRIHRRAHVEVPQQMRRFRCEKCPRLFRNRFLLRTHMQEHNAEKPVMCEVCGLTFSDQKTLEQHSSFHNDAKAFECGICSLVFERKVGLTKHYKLHSEENIVACRICKATFPSVAGLLNHRKTHTPEEWESARQQCKTVPHSSRPQQYKSVPHTTSQPPSPKSYRCSRCSKLLSSKLSLSLHMRVHTGEKPFECLICNKRFTQKPALTYHMRLHTGERPHTCQFCGKGFNSKVGKESHERIHTGERPYRCGQCGVGFRCSANLRQHTWIHTDSRPFTCEICCKPFRRREALQVHMRTHTGERPYSCPLCGRCFTQKGDMLKHTRSHDRPGRGTVTPAAACSTCGQTFAQRKHFKAHRCLLGGPKNENDEVTIAANDVISFPEITVVSNDMQDFEVNINIHNCHLPQIFR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -