Basic Information

Insect: Zhengitettix transpicula
Gene Symbol: -
Assembly: GCA_037074705.1
Location: CM073591.1:21526984-21537045[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0003 0.099 14.7 0.0 2 23 52 73 51 73 0.96

2 16 0.00025 0.084 14.9 1.0 2 23 80 102 79 102 0.95

3 16 6.3e-06 0.0021 20.0 2.9 1 23 124 146 124 146 0.96

4 16 0.00019 0.063 15.3 2.6 3 23 154 174 152 174 0.97

5 16 2.3e-05 0.0078 18.2 2.6 1 23 180 202 180 202 0.97

6 16 2.8e-05 0.0095 17.9 1.0 1 23 208 230 208 230 0.97

7 16 0.0012 0.4 12.8 4.3 1 21 236 256 236 259 0.95

8 16 0.0061 2 10.6 1.9 1 23 265 288 265 288 0.95

9 16 0.0069 2.3 10.4 4.4 1 22 298 319 298 319 0.92

10 16 0.0006 0.2 13.8 1.8 1 23 329 352 329 352 0.95

11 16 2.6e-05 0.0087 18.0 1.2 1 23 362 384 362 384 0.97

12 16 1.4e-05 0.0048 18.9 2.5 2 23 396 417 396 417 0.98

13 16 6.5e-06 0.0022 19.9 0.5 1 23 423 445 423 445 0.98

14 16 2.1e-06 0.0007 21.5 0.4 2 23 452 474 452 474 0.96

15 16 0.00094 0.31 13.1 0.5 1 23 480 502 480 502 0.97

16 16 4.1e-05 0.014 17.4 0.4 1 23 508 530 508 530 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0003	0.099	14.7	0.0	2	23	52	73	51	73	0.96
2	16	0.00025	0.084	14.9	1.0	2	23	80	102	79	102	0.95
3	16	6.3e-06	0.0021	20.0	2.9	1	23	124	146	124	146	0.96
4	16	0.00019	0.063	15.3	2.6	3	23	154	174	152	174	0.97
5	16	2.3e-05	0.0078	18.2	2.6	1	23	180	202	180	202	0.97
6	16	2.8e-05	0.0095	17.9	1.0	1	23	208	230	208	230	0.97
7	16	0.0012	0.4	12.8	4.3	1	21	236	256	236	259	0.95
8	16	0.0061	2	10.6	1.9	1	23	265	288	265	288	0.95
9	16	0.0069	2.3	10.4	4.4	1	22	298	319	298	319	0.92
10	16	0.0006	0.2	13.8	1.8	1	23	329	352	329	352	0.95
11	16	2.6e-05	0.0087	18.0	1.2	1	23	362	384	362	384	0.97
12	16	1.4e-05	0.0048	18.9	2.5	2	23	396	417	396	417	0.98
13	16	6.5e-06	0.0022	19.9	0.5	1	23	423	445	423	445	0.98
14	16	2.1e-06	0.0007	21.5	0.4	2	23	452	474	452	474	0.96
15	16	0.00094	0.31	13.1	0.5	1	23	480	502	480	502	0.97
16	16	4.1e-05	0.014	17.4	0.4	1	23	508	530	508	530	0.97

Sequence Information

Coding Sequence: atgCAGCTGAAAGAGTTCTCGTGTTCCTACACGGGTACAACAGCTATTAAACCGCGACGTTCTGACGACCGCAAACCTCTGACGACAGAGCTTGCGGTCGTCGAAAAGTCGCGGTTTCATCGCGGTCGTACCTattttaataaatcactGTTAACGTGCATGGAATGTGGACTCAGTCTTCCAGATGCTGTGTCCTTACGAAGGCACATCTCCTCACATGaacttgaaagaaaattaacatgTGAAACTTGTGGCTTATTCTTCACAACTTCTAGAAGATTTAAAATGCACATGGTAACTGCTCATAGTCCCTACGACATTGCCGATCCTGTTCCAGTACGCAACTCTAATGAATCTGAGCTTGATCCTCACATTTGTAACCAGTGTGGCAAAGCTTTCAGTTCAATGGGAAAACTGCAGGTCCACATGAAACATCATGCTGCTGGCAAAGTTTTTGGATGTGTTCATTGTGATAAATGCTTTACCAAAGAACAGGTGTTAGCACGACATATGTTAGTGCACAGCGgtgAAAGGCCATTTATTTGCAACCTTTGTGGTAACCGTTTTCGGAACAAGCATAATTTAATGGTTCATTCAAGACTACACACTGGCCAGAAGCCTTTTATTTGTCCAATATGTAATGAAGGATTTTATGTGAAATGTTCACTCACTGTGCATATGTCTAAACACATGGAAGACACTCCTTTCAAATGTAATGTTTGTAATCGTGGTTTTGCCTCTAAACGCTGCCTCCAAGTTCATGAACGTTGTGCTCACACTGGTGACCGTCCTTTTTTGTGCCAACAATGTGGACATCGATTCGCCTGGTTTGGAGAACTGAACCGGcacattaaaagaaaacattctGAAGGGCCCATACCAAAAATTTCACACTGCTGCTTGAATTGCAATAAAAAGTTTCGCTCAAAGTTTCAGATGGAAGAACATATTAGCACTTGTGAAAGTGGCACAGCAGAATTACCATTTGCTTGTCTTGAGTGCAATGAAAGATTCCGTCACCGACTTGCGTTGAGATACCATCTCCGAGAGCAACACGAAGAAGGAGGTGCCGAAGTAGGACAATTTGAGTGTGAACCATGTGGTCGTAGATTCCAACGGAAAATTACTCTTCGTTTACATATGCGAAAGcattttgaaacaaatgaacCTAAGTTACCTGGTGAAGAATGTCCTTATTGTGGTATTCGATTATCTACTCATCACACTCTAGTAAAACACATTCGTACTCACACAGGTGAACGACCCTTCGTATGTTCCGAATGTGATAGTCAGTTTGGTCGTCGTGGTGATTTAGTGAAGCACCAGCGTACACACACAAAAGAGAGACCCGAGAGTTGCCCTGAATGTGGAAAAACATTTTCTTGGCGAAGTGCCTTATACAGACACATACGTAGTACTCACACTGTAGAAAGACCACACGAGTGTAATATCTGCAGTCGAAGATTTGCATGGGGCAATGAGCTAGTAAAACACATGCGCATTCACACTGGAGGTAACCCATATGCATGTGATCAGTGTTCAGAAAGATTCCCTACAAAACATGGATTATCTGCACACCTTATGGTACACACGGGGGAAGTGCCTGATGATTAG
Protein Sequence: MQLKEFSCSYTGTTAIKPRRSDDRKPLTTELAVVEKSRFHRGRTYFNKSLLTCMECGLSLPDAVSLRRHISSHELERKLTCETCGLFFTTSRRFKMHMVTAHSPYDIADPVPVRNSNESELDPHICNQCGKAFSSMGKLQVHMKHHAAGKVFGCVHCDKCFTKEQVLARHMLVHSGERPFICNLCGNRFRNKHNLMVHSRLHTGQKPFICPICNEGFYVKCSLTVHMSKHMEDTPFKCNVCNRGFASKRCLQVHERCAHTGDRPFLCQQCGHRFAWFGELNRHIKRKHSEGPIPKISHCCLNCNKKFRSKFQMEEHISTCESGTAELPFACLECNERFRHRLALRYHLREQHEEGGAEVGQFECEPCGRRFQRKITLRLHMRKHFETNEPKLPGEECPYCGIRLSTHHTLVKHIRTHTGERPFVCSECDSQFGRRGDLVKHQRTHTKERPESCPECGKTFSWRSALYRHIRSTHTVERPHECNICSRRFAWGNELVKHMRIHTGGNPYACDQCSERFPTKHGLSAHLMVHTGEVPDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -