Ztra027102.1
Basic Information
- Insect
- Zhengitettix transpicula
- Gene Symbol
- -
- Assembly
- GCA_037074705.1
- Location
- CM073592.1:23991232-24000408[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 6.1e-06 0.002 20.0 0.7 1 23 600 622 600 622 0.97 2 18 0.0085 2.8 10.1 3.9 1 20 628 647 628 650 0.93 3 18 5.5e-06 0.0018 20.2 1.3 1 23 656 678 656 678 0.98 4 18 7.2e-05 0.024 16.7 2.7 1 21 684 704 684 706 0.94 5 18 2e-05 0.0068 18.4 4.6 1 23 712 734 712 734 0.99 6 18 2e-05 0.0068 18.4 5.3 1 23 740 762 740 762 0.97 7 18 1e-06 0.00035 22.4 4.8 1 23 768 790 768 790 0.97 8 18 7.5e-08 2.5e-05 26.0 2.7 1 23 796 818 796 818 0.98 9 18 5.6e-05 0.019 17.0 6.7 1 23 824 846 824 846 0.97 10 18 5.5e-05 0.018 17.0 5.7 1 23 852 874 852 874 0.97 11 18 1.2e-05 0.0041 19.1 3.8 1 23 880 902 880 902 0.98 12 18 0.00037 0.12 14.4 13.0 1 23 908 930 908 930 0.98 13 18 1.3e-05 0.0044 19.0 6.9 1 23 936 958 936 958 0.98 14 18 0.0015 0.5 12.5 8.1 1 21 964 984 964 986 0.95 15 18 0.0014 0.45 12.7 8.8 1 21 992 1012 992 1014 0.94 16 18 0.00088 0.29 13.2 0.3 3 23 1022 1042 1020 1042 0.97 17 18 0.025 8.2 8.7 4.5 1 23 1052 1074 1052 1074 0.98 18 18 5.3e-07 0.00018 23.4 0.9 1 23 1080 1102 1080 1102 0.96
Sequence Information
- Coding Sequence
- ATGAATGCTGAACAACATGCCTTACCTTCTTCTTCTGCACCAGGCCAGACAGAGGAACCAGCACATCCTGTTGCAATTCACAGAAATTCTGGTACATCAGCAGACTTGCGTGTTGGAACAGCTGTTGCTCTCTCCAGTGTTGCTAAATATTGGGTCTTAACAAATTTGTTTCCAAGTCCTTTGTCACAAGTTTACATTCACCCTCCAAGACCATGTGACAATGGAAAACCTGGCCATGAGAACATACCTCAACAACACTGTTTAACAGGACCGCCTGGGATTGGAGTAGCGACAGAAGCAATGGCTCTTGTTCCACATCATCCACAACATTCACAGCCACAGcaAATACCGGTGCAAGCAACTCTAACAACTTCTGCTGGTGGTGTTGCCACTATCTCTCTTCCTGCTCACCACATGGAATTGGCTGTACCTGTTGGGGATGAGAACAAATCTAAACAAGATAAGGGAACGTGCACAACAGAACGTTGTGGAGAGAACCAGGTGCAGTGTGACCTTCAATTAGTTAATACATCTGCAGCTGTACCAGGGCAACACCAAAATAATGATCATTTAGCCAGCCAGCAAGCAATTGCTGTGCACATATCACAGCAAATACACCACCAGCAACAATCATCACACCAcattcaacaacaacaacaccaAGCACATCAGCAAATGCAGCATCAACAGCACCTCCAACCACATCACTCCCAGCAACAGTCACATCAACCTACTCAACACCAATCACACCAGCATCAACCTCATCAGTCCCAACAATCTCAGCATCAGTCACACCAGACCCAACAGCCAGCACATCAAACGCAACACCAATCCCAGCAGTCTCACCCACCACAACAACAGCATCCTCATCAACCtcaacagcagcagcaacacCAGTCCCAACAGCCACATCATGTACAACATCAGGCTCAGCAGCATCCACAGCAGCAGCCTCATGCACCTCCCCAGCAGCAGCCTCATGCACCTCCCCAGCAGCAGCAACATGGACCTCCACAACAACAACATGGACCTCCACAGCAGCAACATCAACAACAACAGTCGCATCCTCCTCAGCAGCAACATTCATCTCCTCAACAGCAGCATCCTTCACAACAACATCCACCGtctcagcagcagcagcaacatcCACCCTCACAGCAGCATCCTCCTCCTCCACAACAACAGCAGCAACACCAACAGCACCAGGCACAACAGCATCATCAACATCATCAACCTCATCATCAACCATCACCACCTCAACAACAGCAAACTTCCCAGTCACAACATCAACCACAATCTAATGGACAACAGATTGTGCAGCAAACTCCAAGTAAAGGACAATCTGATATGCAACAGCAATCACCTCCAGTTGCATCTACTAGCTCTCAGGAGGTTGGTACTCAAATGGATGCAAGTCCAGATCAGTCTGTTAAAGATGAAAAATCAGGAGTTGGATGCATTAAAGATCAGCGAATTTTAATTCCTGGATTCCCCATTCAAGAACTTAAAGGCCATATGATGGATATCAGAACCCCAGATGGAAGTATTGTTAAGATCACTACACCAAGTAATGGAGACCAAGATTTAGCGAAGACTTTGGGTGTAGAAATGGTTCAAAATATGTACAAGGTAAATGTTGAAGAATTTAACCAGCTTTTGGCTTACCATGAAGTATTTGGCAAATTGCAAACGGAAATGGTTGCTAACGGTAGTCAAGGAACTGGGAAAAATTGTGGAGAAAGTGGATCTGGTGTGACTGCTGCACAGGCTTCTGCAATTCTCAACACTCCTGGTACCCATCCGTGTGATGTGTGTGGAAAAATTTTCCCGTACCGTTATCAACTTATTGTACACCGGCGATATCACACAGAGCGGAAGCCATTCACCTGTCAGgtcTGTGGTAAAGCATTTTCATGTGCATCAGAACTCAGCAGGCATGGTAAATGCCACTTGGGAGGCAGTATGTTCACCTGTTCGGTGTGCTTCCATGTGTTTGCCAATGCTGCAAGTCTGGAGCGTCACATGAAGAGGCATGCTACAGACAAACCTTATGCCTGCTCTGTCTGTGGGAAGGCTTTTGCACGCAAGGAACATTTGGACAACCACACCCGTTGTCACACTGGTGAGACCCCTTACCGGTGTCAATACTGTGCCAAGACATTTACTCGCAAGGAGCACATGGTGAACCATGTGAGGAAGCATACAGGTGAGACCCCACACCGCTGCGACATCTGCAAGAAGTCATTCACACGCAAGGAACACTTCATGAACCACGTCATGTGGCACACAGGTGAGACACCGCACTCCTGCCAGGTGTGTGGCAAGAAATATACTCGGAAGGAGCACCTAGCCAACCACATGCGCTCCCACACCAACGACACACCCTTCCGTTGTGAGATTTGCGGCAAGTCGTTCACCCGTAAGGAGCACTTCACGAATCACATCATGTGGCACACAGGCGAGACACCACACCGCTGTGACTTCTGCTCCAAAACGTTCACCCGCAAGGAGCACCTGCTGAACCATGTCCGCCAGCATACTGGCGAGTCGCCCCACCGCTGTGGCTTCTGCTCCAAGTCATTCACCCGCAAGGAGCACCTGGTGAACCACGTTCGGCAACACACAGGTGAGACCCCATTCCGTTGCCAGTTCTGCCCCAAGGCCTTCACCCGTAAGGACCACCTGGTGAACCACTCACGCCAACACACCGGGGAATCCCCACACAAGTGCCACTTTTGCACGAAATGTTTTACCCGTAAAGAGCACTTAACGAACCACGTCCGTCAGCACACGGGCGAGTCGCCGCACCGGTGTCAGTTCTGCTCCAAGTCCTTCACACGGAAGGAACACCTTACTAATCATGTGCGTATCCACACAGGCGAGTCACCACACCGTTGCGAGTTCTGCGCCAAGACCTTCACCCGGAAGGAGCATCTGACCAACCACCTGCGCTGCCACACAGGAGAGACACCTCACTGCTGCAACGTTTGTTCCAAGCCATTCACCCGAAAGGAGCACCTGGTGAATCACATGCGCTGCCACACTGGTGAGCGGCCATTTGGTTGTGCTGAGTGCGGGAAGTCATTCCCACTCAAGGGAAACCTGCTGTTCCACCAGCGTTCACACAACAAAGGGGCCGCTGCTGAGAGGCCCTTTCGCTGTGACCTCTGTCCGAAGGATTTCATGTGCAAGGGCCACTTGGTATCACATCGTCGCAGCCACTCTGGTGACCGCCCCCACGCGTGCCCTGACTGTGGCAAGACGTTTGTGGAGAAGGGAAATATGCTGAGGCATCTTCGTAAGCATGCTACAGATGGTCAGCAGCAACAGCCCCCTCCTCCCACACACCACCATGGTGTTGTTGTACCTCATATGACACATCATGTTCCACCGccacctccaccaccaccaccaccacctcctCCTTCAGCCCCACAAACGACACTTCAGTCccagcagcagcaacaacagcagcagcaacaaccacctccaccaccaccaccctctCATAATGCTGTTGTGGTGCCCACACCTAATGGTGTTCTTTctacttattaa
- Protein Sequence
- MNAEQHALPSSSAPGQTEEPAHPVAIHRNSGTSADLRVGTAVALSSVAKYWVLTNLFPSPLSQVYIHPPRPCDNGKPGHENIPQQHCLTGPPGIGVATEAMALVPHHPQHSQPQQIPVQATLTTSAGGVATISLPAHHMELAVPVGDENKSKQDKGTCTTERCGENQVQCDLQLVNTSAAVPGQHQNNDHLASQQAIAVHISQQIHHQQQSSHHIQQQQHQAHQQMQHQQHLQPHHSQQQSHQPTQHQSHQHQPHQSQQSQHQSHQTQQPAHQTQHQSQQSHPPQQQHPHQPQQQQQHQSQQPHHVQHQAQQHPQQQPHAPPQQQPHAPPQQQQHGPPQQQHGPPQQQHQQQQSHPPQQQHSSPQQQHPSQQHPPSQQQQQHPPSQQHPPPPQQQQQHQQHQAQQHHQHHQPHHQPSPPQQQQTSQSQHQPQSNGQQIVQQTPSKGQSDMQQQSPPVASTSSQEVGTQMDASPDQSVKDEKSGVGCIKDQRILIPGFPIQELKGHMMDIRTPDGSIVKITTPSNGDQDLAKTLGVEMVQNMYKVNVEEFNQLLAYHEVFGKLQTEMVANGSQGTGKNCGESGSGVTAAQASAILNTPGTHPCDVCGKIFPYRYQLIVHRRYHTERKPFTCQVCGKAFSCASELSRHGKCHLGGSMFTCSVCFHVFANAASLERHMKRHATDKPYACSVCGKAFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHSCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHVRQHTGETPFRCQFCPKAFTRKDHLVNHSRQHTGESPHKCHFCTKCFTRKEHLTNHVRQHTGESPHRCQFCSKSFTRKEHLTNHVRIHTGESPHRCEFCAKTFTRKEHLTNHLRCHTGETPHCCNVCSKPFTRKEHLVNHMRCHTGERPFGCAECGKSFPLKGNLLFHQRSHNKGAAAERPFRCDLCPKDFMCKGHLVSHRRSHSGDRPHACPDCGKTFVEKGNMLRHLRKHATDGQQQQPPPPTHHHGVVVPHMTHHVPPPPPPPPPPPPPSAPQTTLQSQQQQQQQQQQPPPPPPPSHNAVVVPTPNGVLSTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00678782;
- 90% Identity
- -
- 80% Identity
- -