Ztra008192.1
Basic Information
- Insect
- Zhengitettix transpicula
- Gene Symbol
- bab2
- Assembly
- GCA_037074705.1
- Location
- CM073590.1:178568485-178582788[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.8e-06 0.044 15.1 0.0 2 38 94 129 93 132 0.87 2 4 4.7e-11 2.7e-07 31.8 0.0 3 38 145 179 143 182 0.90 3 4 0.31 1.7e+03 0.4 0.0 6 35 203 231 199 238 0.79 4 4 4.4e-11 2.5e-07 31.9 0.1 5 39 262 296 261 300 0.94
Sequence Information
- Coding Sequence
- ATGGATAAGAAGATTCAGCACTACTGCTTGCAGTGGCATAATCATCATAACGATGTAGCAGAGGTTTTTCTGCAATTGTTACAAGCAGATTCTATGGTTGATGTTACTCTCTGTGCTGAAGGACAGTCTTTGTATGCTCATCGCATGATTCTTTCCATATGTAGTCCTTTCtttcagaaaaatgaaattaattcaaagacaGATACTACTCATAAATTGACTgaagaagaagataagaaaAGAAAACGAAGAAAAGACACCTGCAAGAAGGAATAcagTGAAGAATCTATGGAAACAGCTTTAGGCGACATTCGTGTTGGTCGACCTCTTGTGGAAACGGCAACTGCTCACAATATTCCTCGTTCAACTTTATATCGTAGAGCAAGATCACAAGGAGTTATTCCAACAATGACTCGTCATGAACACACGGGAGATAATGTCCTGGCTGCTGTAAGAGCTGTTACAGgaGGGGCAAGTCTTCAGCAAGCTGCAGacctttttaaaattccaaaaacTGTTTTATGGAGGCGAGTTAGAAAAGTTGGAGGTGGTGGAATATTAAGCAGAAGAgcaaaaattaaacaagtaCTTAATCAGGAGAAATGGCAATTAGCCATACAAGCTTTAGAGCAGGGGCAAAGCTTGAGTTCTGTTGCTACCATGTTTCAGATTCCAAAGAAGCTCTTGTACAGAGAAAAAGTTCGTCTAGTTGAATCTGGCTTATTGCCAAACACTTCTTTAAGAAAATCAACTTTTGCGACAGATACCTGCAAACAACTACGCCTAAAAGAGGCTGTAATTGCTTGCCAGCAAGGGAAAATGTCACAAGCTGCAGCTTCTGCAACATATCAGGTTCCAAAAACATCCATATGGAGAAGACTTCAGCAGGAAGCACAGGATGCaaataataaagacagaaaaCCTGGAGATAAACCAAATGTGTCAATTGATCATTTGCAAGAACAGTCAGAATTCTCATTTCATGATgtAACAGGGCAGATACCAGTGGCATATATAGATGAATCAGCATTCCATGAAACATCACTCATTATACTTACAACAGATATTGATAGCAGAATAGAATTGCAAGAGCAaagtaaaacttga
- Protein Sequence
- MDKKIQHYCLQWHNHHNDVAEVFLQLLQADSMVDVTLCAEGQSLYAHRMILSICSPFFQKNEINSKTDTTHKLTEEEDKKRKRRKDTCKKEYSEESMETALGDIRVGRPLVETATAHNIPRSTLYRRARSQGVIPTMTRHEHTGDNVLAAVRAVTGGASLQQAADLFKIPKTVLWRRVRKVGGGGILSRRAKIKQVLNQEKWQLAIQALEQGQSLSSVATMFQIPKKLLYREKVRLVESGLLPNTSLRKSTFATDTCKQLRLKEAVIACQQGKMSQAAASATYQVPKTSIWRRLQQEAQDANNKDRKPGDKPNVSIDHLQEQSEFSFHDVTGQIPVAYIDESAFHETSLIILTTDIDSRIELQEQSKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01565743;
- 90% Identity
- iTF_01565743;
- 80% Identity
- iTF_01565743;