Ztra039469.1
Basic Information
- Insect
- Zhengitettix transpicula
- Gene Symbol
- retn_1
- Assembly
- GCA_037074705.1
- Location
- CM073594.1:5743209-5746693[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5 3.2e+04 -3.0 0.0 55 73 125 142 114 149 0.55 2 2 1.9e-14 1.2e-10 43.2 0.0 17 79 183 243 175 244 0.90
Sequence Information
- Coding Sequence
- ATGACCGGAGTGGTTTCATTCTTTGTTGCCATTTCTCTTGAGAATCACCCAATCGGATTTGTTCATGGGCAGGGGAATCCTCTCAAGAACCCCCCTAAAAAGACGAGCAAGAATTGTTTCCAGATTGAGGGTGGAACTTCCGTTGAGTTTTCACTGTATAATGGTGGTCCTGGATTTCAAAGGGTTGCGACGATTTTGTATGAAGATTCATACCAAGCAAACCCCTTTTTTTTCATCAGCTTCATCAGTTTCTGTGGTCCAAACGTTGGAGCAGGCCGTCATGAACGGGAATCCTCTCAAGAACCGCCAAAAAAGACAAGCAAGAATTGTTTCCAGATTGACGGTGGACCTTCCGTTGAGTTTTCAAAAGTGTGCGACGATGTTGTTAGAAGATTCCAACCCAAAAAAAACTCTTCATCAGCTACCGAGACGGAAGTGGAGGAATGTGTGTCGCATGTCCAGATGGTGATATCAGATGCGGGGGCGGGTAAGCGAGCGCCCTGCTCGATTCCATTAATCACCTGGCTGCGGGTCCGTGTTGTACATCGGACACCAATCAACCGGCTTCCGATTATGGCTAAATCAGTGTTGGACCTGTACGAGCTTTACAACCTGGTGATCGCCCGCGGAGGTCTGGTCGAAGTTATCAACAAGAAACTCTGGCAGGAGGTCATCAAGGGTCTGCATCTGCCGTCTTCCATCACTTCAGCGGCATTCACACTTCGCACACAGTAA
- Protein Sequence
- MTGVVSFFVAISLENHPIGFVHGQGNPLKNPPKKTSKNCFQIEGGTSVEFSLYNGGPGFQRVATILYEDSYQANPFFFISFISFCGPNVGAGRHERESSQEPPKKTSKNCFQIDGGPSVEFSKVCDDVVRRFQPKKNSSSATETEVEECVSHVQMVISDAGAGKRAPCSIPLITWLRVRVVHRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEVIKGLHLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -