Zpyr041224.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zeuzera pyrina
Gene Symbol
Zbtb8b
Assembly
GCA_907165235.1
Location
OU015647.1:5621336-5649401[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.0062 0.78 11.6 1.8 1 23 541 563 541 563 0.99
2 11 0.043 5.4 9.0 0.3 1 23 570 592 570 592 0.98
3 11 1.9 2.4e+02 3.8 0.0 1 23 596 619 596 619 0.96
4 11 1.2 1.5e+02 4.4 3.4 1 23 626 648 626 649 0.91
5 11 6.7e-06 0.00084 21.0 1.5 2 23 655 676 655 676 0.98
6 11 0.006 0.75 11.7 2.6 1 23 682 704 682 704 0.98
7 11 1.4e-05 0.0018 19.9 1.7 1 21 710 730 710 735 0.93
8 11 0.04 5 9.1 0.1 1 23 743 766 743 766 0.93
9 11 0.0025 0.31 12.9 0.1 1 23 772 795 772 795 0.93
10 11 7.3e-06 0.00092 20.8 1.2 1 23 804 826 804 826 0.99
11 11 2.3e-05 0.0028 19.3 2.2 1 23 832 855 832 855 0.97

Sequence Information

Coding Sequence
ATGTCTGAAAAGAAGGAACGGAAAGGGTATGCCTATGCTCATAAGGTCTCCGATACAGATGGCTTGCCTCCGTGGATATGCTTCGAATGTTGTGATTGCATACAAAGAGCGGTCAATTTTAAACGTAGACTAATCAGGTCCAATGCATTGTTGTATGAGTATCTGGTTATCCGTGCGCCATATCTAATACGCAACCGCTACCCGAATCCGCATCTATGGAGATGCGAAATACCCAACTTGTACCCAACACTTACCCTTTCATTCGACAACAGCGGTAAAGAGAAGTCTGGCTTCCATGAACTGTTAatgcaTGAAAAATCAGTACCAAAAAGCAAAGTACAGACTAATACTATAATATCAAACACAAAAGAATCTAACAGTACTACTGTTGCACTGATAACGAAGTTAGTGGAGGTCAAGACAGAGCCCGGCTCCTCAGTATACGAGAACATCACATTGAAAAAGAAGGCAATACAAAACAAACTACACGATATTGATATACAAGTATTGAATGCAGATGATTGCACAAATACTGATGCAACTTTGACGAATAAATCAGTAGAAGTGAAAAAAGAACCTGCTGTTTTAGAATATGAGAACACTTTCATCCAAGAAGTATCAGTAAGTAACAGCAAAGATATTAATATTCACACATTAAATATAGAACAATGTACGAATACTGATACAATTTTGATGGATAAACCGGTTGAGGTAAAGGAAGAATCCAAATTTTCTGATAATGAGGAGAATGTGCAAGAGTCAATACCAAGTAACAAACTACTTGAAGTAGATATACAGCTGTTAAATACTGGAGAAATGGTTAACAGTATCGTAACTGAAGAACAGTTGAAGGAAGAACCTGAGTTCTCAGATTATGAGGATAACATGACATTGCAGGAGTATAAaataaatgatgaagaaaaagaaagtcAACAAAGATACAGAGAGCAGAACAGAGAAAAACTGGAACAGTATGAAGCGGAGAGAATGAAacgtaaaattgaagaaaagaatgctctCCAAAAAAAAAGAGAACGTCAACAAAGGTACAGGGAGCAAAACAGAGAGAAACTGAAGCAGCGTGAAGCGGAAAGAAGAAAACGTAAAATTGATGAAAGGAATgctcttaaaaaaaaaagagaacttCAACCAAGATACCGGGAGCAGAACAGAGAAAAGCTGAAGCAGCGCGAAGTGGAAAGAAAACAATGTCAGcaaaatacagaaataattaGTGAAGTGATAACAGATGATGAAATAAGTACAAGTTCTCTAAGTGTAGCTGGTTTGGAAGAAACACAGAGTCTATTCGTTGAAATAGCCGAGcgAATGAGTAATGGCAAGATATCTGAACAGGATCTGAACAAAATATTAGTGGACACAGAAAAACTGGATGTGTCCGCTGGATTCAAGAGGAAAGGGGAAATGAAGAAGGACGTCAGAAAATCGAAGAAGGCGAAGAAAAGTGATAAAACATCAGAAAAAAACGAGAGCAAAAAGAAACCTACTGTTAGAAGAACCATAGAATTGGACCCAACGAAGATAAGGATCGTCTCATTGAATCCCGAGGAGCAGTTGAAGCAAAGGGAGGAAGACAATAAAGCAGGTGTTAAATTTCCATACCAGTGTTTTTTATGTTTCGTGGGGTTCAATTTCGAAGTGAAATTGCAGAATCATATGAAGAAACACAGCCCATCCCGGGGCCCATATAAATGCGACCTGTGCAGCATTTACCTGCCAAACCCATACAGCTTCAACGTTCATTCACTGACACACACGCGCCGGTACGAGTGCGTCGCCTGTGGCCGCCGGGCCATGGACCGCGTCGCCGTCATGGATCACTACAGGTCCGAACATGAAGGAATTcatgcaatgtatatttgtgatCTGTGCGGGAAAGTTTCCAAAAATGACAAGACCCACCGTTCTCACGTTAAACTCCATCACATCGGTGAACGTCCCAAGTGCAGCCAGTGCGGGAAGACCTTCGTCCACAAGGGCGCGTTGTCTGACCATATGCTAAGCCACGAGGGCGTGAAGAATTACGAGTGCACCACTTGCGGCAAGTGGTTCATGACAAGGACCAAGTTCAAGGATCACCAGCTCAAACACCTGGCGTTAAAGAAGTACTATTGCAAGGAGTGCGACGCCAGATTCACGACGTCGTATAACCTCAAGCAGCATCTCCTGAAAAGTCTGAGACACAGAGACGAACAGACACTTAAGTACCCTTGTGCCCGCTGCCCCAAGCGGTACGAGTCGGAGGCGCGGCTGCGCCAGCACGCGGCGGTGCAGCACGAGGGCGTGCGCTCGCACGCGTGCCCGCAGTGCGCGCGCACGCTCGCCACGCGCTCCTCGCTCGCGGCGCACATCAACGCGGTGCACGCGGGCAAATACCCCGCGCGCCGCTACACCTGCGACACTTGCGGGAAGGCGTTCAGGAATAAGAACGTGCTGGTGAATCATTTCCGGACCCATACGGGCGAGAAACCCTTCCCGTGCAGCGAGTGCGGGCGACGGTTCGCGCAGCGGAGCACTATGAGAACCCATCACAAAATGGTGCACCTCAAAGTAGACCGCGCGGCCAAGATAAGTCCGCTCGTGTTCACCGTTTGGAACCAGCCTCCGCCGTCGCCGTCCCGCGATGTCTACGTAGATGTGCCGGCGGAGTCCTGA
Protein Sequence
MSEKKERKGYAYAHKVSDTDGLPPWICFECCDCIQRAVNFKRRLIRSNALLYEYLVIRAPYLIRNRYPNPHLWRCEIPNLYPTLTLSFDNSGKEKSGFHELLMHEKSVPKSKVQTNTIISNTKESNSTTVALITKLVEVKTEPGSSVYENITLKKKAIQNKLHDIDIQVLNADDCTNTDATLTNKSVEVKKEPAVLEYENTFIQEVSVSNSKDINIHTLNIEQCTNTDTILMDKPVEVKEESKFSDNEENVQESIPSNKLLEVDIQLLNTGEMVNSIVTEEQLKEEPEFSDYEDNMTLQEYKINDEEKESQQRYREQNREKLEQYEAERMKRKIEEKNALQKKRERQQRYREQNREKLKQREAERRKRKIDERNALKKKRELQPRYREQNREKLKQREVERKQCQQNTEIISEVITDDEISTSSLSVAGLEETQSLFVEIAERMSNGKISEQDLNKILVDTEKLDVSAGFKRKGEMKKDVRKSKKAKKSDKTSEKNESKKKPTVRRTIELDPTKIRIVSLNPEEQLKQREEDNKAGVKFPYQCFLCFVGFNFEVKLQNHMKKHSPSRGPYKCDLCSIYLPNPYSFNVHSLTHTRRYECVACGRRAMDRVAVMDHYRSEHEGIHAMYICDLCGKVSKNDKTHRSHVKLHHIGERPKCSQCGKTFVHKGALSDHMLSHEGVKNYECTTCGKWFMTRTKFKDHQLKHLALKKYYCKECDARFTTSYNLKQHLLKSLRHRDEQTLKYPCARCPKRYESEARLRQHAAVQHEGVRSHACPQCARTLATRSSLAAHINAVHAGKYPARRYTCDTCGKAFRNKNVLVNHFRTHTGEKPFPCSECGRRFAQRSTMRTHHKMVHLKVDRAAKISPLVFTVWNQPPPSPSRDVYVDVPAES*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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