Basic Information

Insect: Zeuzera pyrina
Gene Symbol: -
Assembly: GCA_907165235.1
Location: OU015645.1:11265323-11266903[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.012 1.5 10.7 0.7 2 23 171 193 170 193 0.92

2 9 2.3 2.9e+02 3.5 2.7 2 23 228 249 227 249 0.94

3 9 0.0023 0.29 13.0 0.1 1 21 254 274 254 275 0.95

4 9 7.2e-05 0.0091 17.7 0.9 3 23 304 324 302 324 0.92

5 9 1.9e-05 0.0024 19.5 3.9 1 23 331 353 331 353 0.97

6 9 0.00013 0.017 16.9 2.3 1 23 359 381 359 381 0.95

7 9 0.00016 0.02 16.6 4.3 1 23 387 409 387 409 0.96

8 9 0.00028 0.035 15.9 3.4 1 23 415 437 415 437 0.98

9 9 5.5e-06 0.00069 21.2 2.3 1 23 443 466 443 466 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.012	1.5	10.7	0.7	2	23	171	193	170	193	0.92
2	9	2.3	2.9e+02	3.5	2.7	2	23	228	249	227	249	0.94
3	9	0.0023	0.29	13.0	0.1	1	21	254	274	254	275	0.95
4	9	7.2e-05	0.0091	17.7	0.9	3	23	304	324	302	324	0.92
5	9	1.9e-05	0.0024	19.5	3.9	1	23	331	353	331	353	0.97
6	9	0.00013	0.017	16.9	2.3	1	23	359	381	359	381	0.95
7	9	0.00016	0.02	16.6	4.3	1	23	387	409	387	409	0.96
8	9	0.00028	0.035	15.9	3.4	1	23	415	437	415	437	0.98
9	9	5.5e-06	0.00069	21.2	2.3	1	23	443	466	443	466	0.98

Sequence Information

Coding Sequence: ATGAATAACAGTGAAAATTTATACTGTCGACTATGTGCCACACTAAAACCTTGCGACAAACTAACAGACCTGTTAACAAACGACGAGAAGAGGCGAGAAGTCGTCGAGAAACTGTATCGTCTCAATAGTGGTAACATCGATCTTTTTAGCGACGATTCTTTGCCAAAAACCGTGTGTTTTACTTGTATTATTGCTTTAGACAATGCTTTCGAGTTTGTTGTTAGCGTAGAACAAGCACAAATAACGCTTAACGACTTAGTATTAGTgcctaaaataaaacaagaagaAACTGCTAATGACACGCAAAGCGACAACGAATTTGACAATTTCGAATATGGGCCGTCTGCAGACGTAAACAGTGTTGTTGTTAAACAAGAGGAAAAAGACGTGAAGCCAGATTTATTGAAAATAGCAGTACAAAAGcagaaaaaaaatcgaaaaaaaattttcaaggaCTTAGATACTGTACCATTAGCACAATTGAAACAGACTTGGAAAGAATACAATTGGACATGCTCCTTTTGCGAAACACAGTTCTCCAATGTGGAAGAGTTAAAGTCACATTCTATGCAATATCATGATACATGCAATGCTTTTCGATGTGCCGATTGTAATGTTAGGAAACTGCGGCTtgatagttttttattacatgcCATACAGCACAGGAAATACCTGAAACTATCTTGCTATGTGTGTATGGAACGGTTTACAACAGCATATGATTGTAAAAAACACAAATCAGTACACATAAGCTCTGATTATATTTGTCCAGGATGTAATAGCAATTTTCAGAATTCTGatgaattaaatatacatactaaaGCACTCTATAAAGAGACAAGGGAACGAAAAATACCAGGGATACCAGAAATAGCTCAACTAACCAACCAATTAACTAACCAATGGACCTGCATACTCTGTCAGAAGTCATTCAAGAACAAAGCCAGTCTGAACACGCATTTACTAACACATACAGAACGATCTCGGGACCACACCTGCGAGAAATGTGGAAAATGCTTCTATAGCAAGCAGAATTTGGTAGGCCACATGATACTGCATGACAACAACAGACCTCACAAATGTCAGATATGTAAATTTGCATTCAAAACCTCTCAGCAACTACGTAATCATGTTGGTGTGCATGATGGGCAGAAACCGTTCGCTTGTGACCAATGTGGTCGCTGTTTCAgactacaaaaacaacttagATCTCACCACATTATACATACAGATGCCTTGCCTTACGTCTGCAGTTACTGCAAGAAACGTTTTAGATTTAAGACCATCTTGAATCAACATATCCGTCAACACACTGGTGTTAAACCATACACTTGTCAATTATGTCAGAGAGACTTCACAAATTGGCCAAATTACAACAAACATATGAAGCGAAGACACTGTATAGATACTGCAAAGAAAAAACATACACCAGCTGGAGTATATCCTATCGATCCATCTACTGGAGAACTCATGGTTTTAGAAGATACTAATGATACTGAGAAGTGGAAACGAGAAATGATGGCACAAAGGAAACCGGGCAGACCAAAACTCAAGCAAGACAGTGCACTcaagaaagaataa
Protein Sequence: MNNSENLYCRLCATLKPCDKLTDLLTNDEKRREVVEKLYRLNSGNIDLFSDDSLPKTVCFTCIIALDNAFEFVVSVEQAQITLNDLVLVPKIKQEETANDTQSDNEFDNFEYGPSADVNSVVVKQEEKDVKPDLLKIAVQKQKKNRKKIFKDLDTVPLAQLKQTWKEYNWTCSFCETQFSNVEELKSHSMQYHDTCNAFRCADCNVRKLRLDSFLLHAIQHRKYLKLSCYVCMERFTTAYDCKKHKSVHISSDYICPGCNSNFQNSDELNIHTKALYKETRERKIPGIPEIAQLTNQLTNQWTCILCQKSFKNKASLNTHLLTHTERSRDHTCEKCGKCFYSKQNLVGHMILHDNNRPHKCQICKFAFKTSQQLRNHVGVHDGQKPFACDQCGRCFRLQKQLRSHHIIHTDALPYVCSYCKKRFRFKTILNQHIRQHTGVKPYTCQLCQRDFTNWPNYNKHMKRRHCIDTAKKKHTPAGVYPIDPSTGELMVLEDTNDTEKWKREMMAQRKPGRPKLKQDSALKKE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -