Basic Information

Insect: Zeuzera pyrina
Gene Symbol: -
Assembly: GCA_907165235.1
Location: OU015647.1:4471220-4502475[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.033 4.2 9.3 0.9 1 23 187 209 187 209 0.97

2 12 0.0068 0.85 11.5 1.1 1 23 216 239 216 239 0.95

3 12 9.4 1.2e+03 1.6 1.4 1 23 243 265 243 265 0.95

4 12 0.0008 0.1 14.4 3.3 1 23 270 293 270 293 0.98

5 12 0.12 14 7.6 2.1 1 23 297 320 297 320 0.94

6 12 1.6 2.1e+02 4.0 0.4 2 22 337 357 337 361 0.91

7 12 0.09 11 8.0 0.2 2 23 370 390 370 390 0.96

8 12 0.0002 0.025 16.3 0.3 3 23 415 436 414 436 0.96

9 12 4e-05 0.005 18.5 1.2 2 23 446 467 445 467 0.97

10 12 6.5e-06 0.00082 21.0 1.0 1 23 473 495 473 495 0.99

11 12 6e-07 7.5e-05 24.2 1.9 1 23 501 523 501 523 0.98

12 12 4.3e-06 0.00055 21.5 0.7 1 23 529 552 529 552 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.033	4.2	9.3	0.9	1	23	187	209	187	209	0.97
2	12	0.0068	0.85	11.5	1.1	1	23	216	239	216	239	0.95
3	12	9.4	1.2e+03	1.6	1.4	1	23	243	265	243	265	0.95
4	12	0.0008	0.1	14.4	3.3	1	23	270	293	270	293	0.98
5	12	0.12	14	7.6	2.1	1	23	297	320	297	320	0.94
6	12	1.6	2.1e+02	4.0	0.4	2	22	337	357	337	361	0.91
7	12	0.09	11	8.0	0.2	2	23	370	390	370	390	0.96
8	12	0.0002	0.025	16.3	0.3	3	23	415	436	414	436	0.96
9	12	4e-05	0.005	18.5	1.2	2	23	446	467	445	467	0.97
10	12	6.5e-06	0.00082	21.0	1.0	1	23	473	495	473	495	0.99
11	12	6e-07	7.5e-05	24.2	1.9	1	23	501	523	501	523	0.98
12	12	4.3e-06	0.00055	21.5	0.7	1	23	529	552	529	552	0.98

Sequence Information

Coding Sequence: ATGCCAGAAATtCTTAAAGAAGATGATGGAAAACCTCACCTAGCATGTTACGTCTGCTATGCATTACTAGAAAAATGTCGAGTCTTCAAGGAAGCCTGTTTGACAGCAAATGATGTACTTACTCAGAAATTGGATGATTTAAAGTCCACACatgaatttttgttaataggGAGCAAAAGACATAAATTCATACAAAGATTGTGCCTGTCTCATCCAGAGGTGTTCATAGCGATACCATCACAGTATGATGTCAAATATGAAGCTGATGGTAATGATGGTATCAAGGTGGAAATGATTGATAATGGAAATGTTGATTCGGATTTTTCATacaaagATGAGCAGTCTAAATCAGATATTAATAAATCTGACTCTGAGGATGACATCCCTTTGAAACAATTCAGTCTAAAGAAGATAGACAATATGAAAAGgattaatgtaaaagtgagaAAGAAacatgtaagaatagaaaaggAAATCAAGAAGGAGAAAGAATTAAAAGAACAACAAATAGAAGAGTTGAAAGAGAGATCCAAGTCCCTCAACTATCTCAACTCGCCGTACAAGTGCGATCTGTGCTATAAAGGGTTTATTGACCTCCTGGCGTATTATAATCATAAGGAGAAACACGAAGAGAGTAATGGTATTCATGAATGCGAGATATGCCGTCTACGATACGGTAGCCGCCGACAGCTCAGAGCTCACAAGGCGATGTCGCACACTTGCCGATACCAATGTCTGCGGTGTCGGCAGATCACTCACACCGCGAACCAGGCGCGGGAACACGAGAAATGGCATCAAGGACATATCTACGAGTGTAAATTGTGTGCGCAAAAATTTAGGAAATCAACATCATACCTTACCCACATGCGCAAGCGCCATCCGTCCGAGCACGTTTGCGAAACGTGTGGGGACACGTTCGTGGGAAAACATGGACTCATGATGCACAAGACCAAGAGCCATAAACGAGACGAGAAGCAATCAAATTCATCAGAGCCGCCATCAAAGAGATACTGTAGCGAGTGTAAAATCCAATTCCTGAACATAAACGCTTGGAAACGGCATATGATCACATCGTTGAAGCATTCGTTGCAGTACCAGACCAGCGGCGAGTGTAGTATTTGCGGCGCCTCGTGTTCGTCTGGCGAGTGGGCGACGCACGCGCGGCGCCACGCGCGGGAGCTCCGgcccgcgccgcgcgccgccgggGGCTCCGCCCCTCGCCTGCACCTCGCTACCGTCGATTGCGATGAATGCGGCGCTCAGTTTGTGACAAAAGCGAGTTTAAAATCTCATAAAAACAGAATCCATCTTGGACtcaaatataataagaatattgTGTGCGAGGTGTGCGGGAAGAAATGTACGTCGAACGCAGTACTAAGGTATCACCAGAGGACCCATACTGGCGAGAGACCCTACTCGTGTTCCTCGTGCGTCAAACGGTTCCCAGATAAGAACCAGCTCCGGATACACATCCGCACACACACAGGCGAGAAGCCATACTGCTGTGGGGTTTGTGGGAAAAAATTTAGCCAGAAGCCAGCACTGAATAGACATTACAGGGTCCACACAGGCGCCAAACCCTACGAATGTCAATACTGCTCGAAGGCCTTCAGTCAGACTGGCTCCTTGAAACTGCATGTGAAGACTATACATTTGAAACAACCCACAAGCAGGCGAAATAAGTCCAAACAAGATGATAAGGAAAAAGCACAGGATGTAATGCTTCAGATATCGTAA
Protein Sequence: MPEILKEDDGKPHLACYVCYALLEKCRVFKEACLTANDVLTQKLDDLKSTHEFLLIGSKRHKFIQRLCLSHPEVFIAIPSQYDVKYEADGNDGIKVEMIDNGNVDSDFSYKDEQSKSDINKSDSEDDIPLKQFSLKKIDNMKRINVKVRKKHVRIEKEIKKEKELKEQQIEELKERSKSLNYLNSPYKCDLCYKGFIDLLAYYNHKEKHEESNGIHECEICRLRYGSRRQLRAHKAMSHTCRYQCLRCRQITHTANQAREHEKWHQGHIYECKLCAQKFRKSTSYLTHMRKRHPSEHVCETCGDTFVGKHGLMMHKTKSHKRDEKQSNSSEPPSKRYCSECKIQFLNINAWKRHMITSLKHSLQYQTSGECSICGASCSSGEWATHARRHARELRPAPRAAGGSAPRLHLATVDCDECGAQFVTKASLKSHKNRIHLGLKYNKNIVCEVCGKKCTSNAVLRYHQRTHTGERPYSCSSCVKRFPDKNQLRIHIRTHTGEKPYCCGVCGKKFSQKPALNRHYRVHTGAKPYECQYCSKAFSQTGSLKLHVKTIHLKQPTSRRNKSKQDDKEKAQDVMLQIS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -