Zpyr019141.1
Basic Information
- Insect
- Zeuzera pyrina
- Gene Symbol
- -
- Assembly
- GCA_907165235.1
- Location
- OU015628.1:21587566-21611181[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 3.5 4.4e+02 3.0 0.3 2 23 6 27 5 27 0.95 2 14 0.00036 0.045 15.5 1.2 1 23 1002 1025 1002 1025 0.94 3 14 5.7 7.2e+02 2.3 0.2 1 23 1100 1122 1100 1122 0.90 4 14 1.8e-05 0.0022 19.6 1.7 2 23 1125 1146 1124 1146 0.97 5 14 0.00084 0.11 14.3 1.4 1 23 1152 1174 1152 1174 0.99 6 14 0.0041 0.52 12.2 2.4 2 23 1181 1202 1180 1203 0.95 7 14 0.27 34 6.5 0.8 5 23 1216 1234 1215 1234 0.96 8 14 0.014 1.8 10.5 0.8 3 23 1241 1262 1240 1262 0.96 9 14 0.0087 1.1 11.2 0.1 2 23 1293 1313 1292 1313 0.97 10 14 0.00034 0.043 15.6 1.2 1 20 1319 1338 1319 1341 0.91 11 14 0.0032 0.41 12.5 2.0 1 23 1349 1371 1349 1371 0.99 12 14 0.006 0.75 11.7 7.2 1 23 1377 1399 1377 1399 0.98 13 14 7e-06 0.00088 20.9 1.3 1 23 1405 1429 1405 1429 0.98 14 14 0.0011 0.14 14.0 5.1 1 23 1435 1457 1435 1458 0.95
Sequence Information
- Coding Sequence
- atggaTCAGCTTGTGCAATGTCCTGTATGTACTCTGTACCTTCACAATGGAATGTCATTGGAGTCCCATTTGGATACTCATCCTAAAGATCAAGTTATTAAGGCCCTTTGTAGTTTATCAGCTAAAAGTCCCGGGTATGGCAGCCGAGCTACTACTCCCATGCACTCAGAGAGGTCATACAGGAGTAGATCTCGCACACCAGCTACAGAAGATAGGTGGAATGGCTCACACCGTGGTTCCGAAAGTGATCGATATTGGTGTAGAACTCCCAGTAGAACACCTAAATCTACTCAAATGTCAAATGTATCTAGAATGGGTACACCTTCTTCTGATATTAGAATGGGAGATTTAAATTTTGAGaataatactattaataattCAACTCAATACTCTGCGCCTCAGTATTCTTTAAAAgctgataaaatacaacaaacatATGCACAAACTCCTGCGACCGATATAGATCAGCCATATGTGTATTACCAAGATCAGCAGGAGGAAAGAGAAGTTAAATATTCACGAAGTGCAGAATACACAGGAACAGataatacaaacaatatttttacttacaacATGCCACCAATTGGACAAGGGGTTAAGGTCCAGACTACTTTGTTACCAACAATACCTAAGAGAGGAACTGACTTTGTCAAAATGCTGCCTAAACCAAATAATATACTTGTCAAAACAAATTTGGGAGGTGTCCAATACTTAACTCCAGGAGTTAAACCAATGCATGTAGTGGTGCCTACAACACCTACATTTGTACAAAAGAATGTCCAGAACAACATGATAATGACTGGAAGTATGCCAACTCAGATGTTGGAAACCAAAAGTGTTGCTCCTTCAATAACTGGTAGTCAGTTTAATCAAATCAACTCTGGCAATTTCACTCCTGGCACAACTGTTGTTACGCAAAATTCTCAAATAATTTATAGAGAAATGGTGCACAATATAGATGGAAAACCTTTCATTTCCAGTATGCCTACAGTACTAAGTGGACACGAGAATGTTACTAACGTAGCACAAACAAGTTCCATGTACCAGAATGTAATGGTTGTTGATCAGTTTGGGAATACTTCATGTATGTATGCAACACCACAACAGATTTTGTCTAAAGATTGTGGTGCACCCATATACAGTGACACCATAACAACTACTCCCATTGAAAAATctgtacctaatcttacaaatGATTCTACAAAAACATTGATTATTGAAGTAGGCCCTATAGCTACTCCAGAACCTGTAAATGTGTGTGATGCTGCCACAAGCACATCATTACCATCTCATTCTAATGCTAGCACCCCTAAACCTGAAAGCAGTACTGAGAAAAATGAAGCCAAAAATGAGTTACCAGGATCTAGCAAAGGCCTTAAAATCCTCAGCAATATAAAAGTTGAAGTTCCTGTTCAGCATCACAAAAGTTTACTCAACACTATAGTAGATCTGACAAAATCTAATGAAAATGATTATCCTGAATGCTCAGGGTCATCTGAAAAGATAGCCGGACAATTAGAGAATAATAATCAGACTAACCAGAACATGTCAGATGACACACAACCTTTGACCTCTGGTGATAGTTTAGTTTCACACACCTTTTCTGTGATAAAGAATGTTGGAAATCCCCCTGCATATAAAGACCCTTCTAAGACAAGTGTAGTAGATAGTAAAATTGAAACAGAATTTTCTGATAGTTGTCCTGTGCCTGATTTAATATGTAATGAGAAACCTTCAATATCTCCATGTAGTGAACTGTCTGAAAATGGGGAGAATTCTATTGACCGTACATCTATTTCACCTAAACCACAGAGTAGTAGAGTTTGCCAAAGCAGTATAGATGATACTGAAAAGAAACAACAGTTTCCACCATTTCCCCAAAAgccattcaaaaataatattttaagactgaataatatctatgtaaagaaaaataaaaaaatactgcaaATAAAAAATGCCAAAGCACTTGCATCCACTAGTACAACAAGCAATAATAGCACAGAGCCATGTCCTTCCTCTTCTAGTTGCAGGTCACCAGAAAATTTTGCAATTAACAAACTACACTCTGAAACTAGCGAAATCAAAGATAAATTAAACATGTTGCAAACAGTGTCAGTTGAAATAATCAATAATGAGAATCAAAATGAATTTGACGCTGACACCGAGGACCAATCTATGGATATTGAACCATCGGTTGCATCTTCTAGTTTAAACCATACTGATGAGTTGTGCAATGTCGACATGATACAAGTTAAAGAAGAGATCAATACTAGCAGTGAGGGAGGATTTAGCAATCAAACTGATAATTCCCGTGATCTTACTCCATTGGAGTCCATACGTCCCATTAATGTGATTTCCTATGGTAATATCACCTCTGAAGATTTTGATGAGGAGTCAAATCATAGGGAGCTCTTAGAACTGGAAGCTGCATCTAAGACCAATAAATTTGTAAGTATGATGAATGAGAATTATTTTGGAGATTATGCAGATTATTTTACTCCTGACAGAGTAGAATCCTTTGATGAAAGGGAACCTCCAGCATTTAATAAAGATAACCACAAAGATGGAATGTACATTTGGGGTGAACCTTCACAGAAAGAAACTGAATTTgtcttgccaaattttattCAAGAAAGCTACAAAATTGCCGAAAGTCAAGCTGATTATTCGGAAATAGAACAAGTACAAAATGATGGAGATGCTGATGGTTGTGAGAGAGACAGCAAGGCTGACGTTTTGAGTGAAAGTCGAAGTGAAGGAGAAGTTCCATTGAATATTTGTGCAGATGAAAGAATGCCACCTCGAGGGGAACTGAGTGGTCAGGAGAGTAATGGAGACATGGAGTCACCATGGAGTGGGATGTACACCGAGGTGACGCCATCTGAGCCGTATGATTTGATCGCTCGTGAGAGTTGGATCTCAGATGGATCTGAAATTGATGCTAATGAGAAGAGAGATGCATTAGACGACGTTGTGATACCAGTGGAAAGGCCGCGCGTGTACACATGCACGCAGTGCGGTGGCAAGTTTACGTCCCAGAAGGAGCTGCGGACGCACAAGTCTCTTGCGCATGCGGCGCCAACTTGCTCTGACAAGTATAGCCGCCTCACCGCTCGCACAATCAAGAAAGAGGAGAAGGATGTCAACATATTGCCAGGGAGTCTCCTTCCACTTACCGACTCGAAAGAGTCAATAGCGAACACGGTGCTCCAAGTATATGATGCAATGACTGAGGCCAAGCCAAAAATCGAGAGACTCATCAAACAGGAGCCACCGAAACGGAGAAGACGAGACTATGTTTGTCCAACATGCAAgGTGGACCAAGAGACCGAGGTCGCATTCCACGCCCACCTCAAGATCCATCCACTGGAGTGTCTCACATGTGGGAAATGTTTCTTCCGTCGCGCCAACCTGGCACTACACATAAAAACTCATTTGGGCATAAAGAACTATAAATGCGACGTATGCGACAAGCGGTTCCTGACGCGCCAGAAGCTGTCGGAGCACCAGAACGTGCACACGGGCCGAGCGCCCGTCAAGTGCACAGAATGCGATGACACCTTCCGCCGCTACTCCAATATGGTACAGCACAGggCGCGGCACCACTTCCACAAGAAGGCGCGCGTGCGCGACTTCGTGTGCGAGTGCGGCGGCGTGTTCCACTCGCGCGCCAAGCTGCAGTGGCACCGCGAGACGCACGCGCCGCGGCCCAAGGCGTGCGCCTACTGCAGCGACAAGTTCGTGCACGCCGCCTCGCTCACGCGCCACGTGCGCCGCTCGCACAACGAGTACTACCTCGGCGAGCGCGCCGAGCGCctgcgccgcgccgccgccgccgccggcaCCGCGGCCGCCGCCAAGGTCGACAACGTGCCCTGCCCGGTCTGCAAGCAGGTATATCTAAGGACCAATCTCCGCGCCCACCTCCAAACTCACAGTGGGAAGCGGCCCTACCAATGCATAATATGCAACAAGTCATTCACAACCAAATGGAACCTCAAGCTTCACCGGTGGACTCACATGAGCCGGTCGTCCAAGCCGTACAAATGCAGTTTGTGTAAGGGCGCGTTCATACGACACACCGAATACATATCACATATGAACTCGCACAAGTCTGTCAGACCCTACACTTGCAACTATTGCGGCTGTCAGTTCATTAGGAAGTACAACTGTCAAAGGCATGTCCGGGAACACGAGATGGCCAAGAAATATGTGTGTAAAGTGCCCGAATGTGGTAAGTCGTTCCACAGGAGTTACTATTTGTCGGAACACATGAAAGTGCACAGTGGTGCGAGACCGTTCTCTTGTAATATATGTGGGAAGACGTCGAGTAATAAGTCTAATCATAATAAGCATGTGAAAATACATCACGCGAGAGAACCAATCGCTACTGAAGCGtaa
- Protein Sequence
- MDQLVQCPVCTLYLHNGMSLESHLDTHPKDQVIKALCSLSAKSPGYGSRATTPMHSERSYRSRSRTPATEDRWNGSHRGSESDRYWCRTPSRTPKSTQMSNVSRMGTPSSDIRMGDLNFENNTINNSTQYSAPQYSLKADKIQQTYAQTPATDIDQPYVYYQDQQEEREVKYSRSAEYTGTDNTNNIFTYNMPPIGQGVKVQTTLLPTIPKRGTDFVKMLPKPNNILVKTNLGGVQYLTPGVKPMHVVVPTTPTFVQKNVQNNMIMTGSMPTQMLETKSVAPSITGSQFNQINSGNFTPGTTVVTQNSQIIYREMVHNIDGKPFISSMPTVLSGHENVTNVAQTSSMYQNVMVVDQFGNTSCMYATPQQILSKDCGAPIYSDTITTTPIEKSVPNLTNDSTKTLIIEVGPIATPEPVNVCDAATSTSLPSHSNASTPKPESSTEKNEAKNELPGSSKGLKILSNIKVEVPVQHHKSLLNTIVDLTKSNENDYPECSGSSEKIAGQLENNNQTNQNMSDDTQPLTSGDSLVSHTFSVIKNVGNPPAYKDPSKTSVVDSKIETEFSDSCPVPDLICNEKPSISPCSELSENGENSIDRTSISPKPQSSRVCQSSIDDTEKKQQFPPFPQKPFKNNILRLNNIYVKKNKKILQIKNAKALASTSTTSNNSTEPCPSSSSCRSPENFAINKLHSETSEIKDKLNMLQTVSVEIINNENQNEFDADTEDQSMDIEPSVASSSLNHTDELCNVDMIQVKEEINTSSEGGFSNQTDNSRDLTPLESIRPINVISYGNITSEDFDEESNHRELLELEAASKTNKFVSMMNENYFGDYADYFTPDRVESFDEREPPAFNKDNHKDGMYIWGEPSQKETEFVLPNFIQESYKIAESQADYSEIEQVQNDGDADGCERDSKADVLSESRSEGEVPLNICADERMPPRGELSGQESNGDMESPWSGMYTEVTPSEPYDLIARESWISDGSEIDANEKRDALDDVVIPVERPRVYTCTQCGGKFTSQKELRTHKSLAHAAPTCSDKYSRLTARTIKKEEKDVNILPGSLLPLTDSKESIANTVLQVYDAMTEAKPKIERLIKQEPPKRRRRDYVCPTCKVDQETEVAFHAHLKIHPLECLTCGKCFFRRANLALHIKTHLGIKNYKCDVCDKRFLTRQKLSEHQNVHTGRAPVKCTECDDTFRRYSNMVQHRARHHFHKKARVRDFVCECGGVFHSRAKLQWHRETHAPRPKACAYCSDKFVHAASLTRHVRRSHNEYYLGERAERLRRAAAAAGTAAAAKVDNVPCPVCKQVYLRTNLRAHLQTHSGKRPYQCIICNKSFTTKWNLKLHRWTHMSRSSKPYKCSLCKGAFIRHTEYISHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPIATEA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -