Basic Information

Gene Symbol
ZFY
Assembly
GCA_907165235.1
Location
OU015633.1:22954615-22959239[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 3.7e-05 0.0047 18.6 0.0 2 23 156 177 155 177 0.97
2 11 0.00066 0.083 14.7 2.9 1 23 183 206 183 206 0.97
3 11 3.3e-05 0.0042 18.8 0.5 1 23 213 235 213 235 0.98
4 11 1e-06 0.00013 23.5 1.3 1 23 241 263 241 263 0.98
5 11 2.9e-06 0.00037 22.1 2.0 1 23 269 291 269 291 0.98
6 11 0.00098 0.12 14.1 2.4 1 23 297 319 297 319 0.97
7 11 1.3e-06 0.00016 23.2 0.2 3 23 327 348 326 348 0.97
8 11 0.003 0.38 12.6 0.5 2 23 354 372 353 372 0.84
9 11 8.5e-05 0.011 17.5 0.5 1 22 378 399 378 401 0.90
10 11 0.036 4.5 9.2 0.3 1 23 407 432 407 432 0.94
11 11 0.00015 0.018 16.7 1.2 1 22 438 459 438 459 0.95

Sequence Information

Coding Sequence
ATGGATTGTAATGTGTGCCGAATTTGCCTTAGTAAAACGGCTACTATTTCTATTTTTGATAAGCAAGACGATATTCAGTACAGCACGAAGATAATGCGTTGTGTAAATGTTGTGATTACAGAAGGCGATGGCTTGCCTGATTACATATGCACGACCTGTATCGATGACCTTACAGTGTCGTACAATTTCGTAGAGAAATGTGAAACCGCCGACAAAACTTTGCGCTACGTCAGTTTAAATAACGACTTATGCTCAGATGGGCGACCGAAAATCGAATTAGAGATAAAGCAAGAAATAAAGGATGAGCCATATCAGGCAAGTTGTCAGGACGACTTTCTACTCGACGACACTTTTAAAGAAGAGTTTACAATTAAGCATAGGAAGAGATGTGAATTTAGAAACGAGAAAAGAGTTAAAGGGAAATATGGGAGGAAGAAATTTAAAAGGAACAGGTCAGGACCTATACAATGTGTCATTTGTGGACTGATGACGAGTAGTCCGTCAGCCATGGAGATACATATGCGCACACATACAGGGGAAAAACCATTCTCTTGCCAGTTTTGTGACTCACATTTTCCAACTAAAGGGGCTCTGAAGAGACACACTGAAACATTCCACACACACAGAGAGCGAAAGTTTATTTGTGAGACATGTggaaatagtttttataggaaaacCGAGATAATAACTCATATGCGTATCCATACTAATGAAAAACCGTATGCCTGCTCATACTGCCCAAAGACTTTCAGTCAAGTGTCATCAATGATTCGTCACAAGAGGACACATACAGGTGACAAACCATTTAGCTGTCATATTTGCGGTAGGAAATTTGCAGACCGATCACTTGTGAAAAAACATCAAAGTGTGCACAGTGATGAGAAAAAATTCTCCTGTCATCTCTGCAGTAAGTCTATGAAGTCAAAAACGGCATTGAATGTCCACATGAGTCTACACACAAATGAAAAACAGAATATTTGCAGTTATTGCGGCATGGCCTTTTCAGTAAAAGGCAATCTTAAAACCCACATACGGCGAGCTCATTCAGAAAAGTCTGGTCAGTGCAGCGTCTGTCTTAAAACATTCTCTGACCTAGAAGCTCATATGCGCAAACATACAGGAGAAAGACCATTCGTCTGTGACATATGCAATCAAGCATTTACTACGAAGAGAAGTCTTGCATATCACATAGTGTTTAAGCATGAGAATTCTGCTAAATTCAAGTGTTCAATAGGAGAATGCACAAGAACATTCCCTACGGCGATGATGCTTGAATTCCACCTCCTGAAGCAACATACGAACCACACTCCATATATCTGCCAACACTGTTCCCGTGGCTTCTTTCGTACTAGTGATCTCTCACGCCACCTTAGGGTGCGCTTATCACGGCGTCTCGCTCGCACGTCAATAGGCTCACCGCGAGGTGATACGCGGTTCTCGCGCAGTGCACGTAGAGCACGCACGTCTTTACTGCGGCTGCTCTCGTCTCCGCCGCGGCCAGGTGTCAGTGCCGTGATGTCCAAATCGTAA
Protein Sequence
MDCNVCRICLSKTATISIFDKQDDIQYSTKIMRCVNVVITEGDGLPDYICTTCIDDLTVSYNFVEKCETADKTLRYVSLNNDLCSDGRPKIELEIKQEIKDEPYQASCQDDFLLDDTFKEEFTIKHRKRCEFRNEKRVKGKYGRKKFKRNRSGPIQCVICGLMTSSPSAMEIHMRTHTGEKPFSCQFCDSHFPTKGALKRHTETFHTHRERKFICETCGNSFYRKTEIITHMRIHTNEKPYACSYCPKTFSQVSSMIRHKRTHTGDKPFSCHICGRKFADRSLVKKHQSVHSDEKKFSCHLCSKSMKSKTALNVHMSLHTNEKQNICSYCGMAFSVKGNLKTHIRRAHSEKSGQCSVCLKTFSDLEAHMRKHTGERPFVCDICNQAFTTKRSLAYHIVFKHENSAKFKCSIGECTRTFPTAMMLEFHLLKQHTNHTPYICQHCSRGFFRTSDLSRHLRVRLSRRLARTSIGSPRGDTRFSRSARRARTSLLRLLSSPPRPGVSAVMSKS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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