Zpyr037960.1
Basic Information
- Insect
- Zeuzera pyrina
- Gene Symbol
- -
- Assembly
- GCA_907165235.1
- Location
- OU015644.1:3950274-3953756[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.0095 1.2 11.0 0.5 1 21 67 87 67 88 0.94 2 21 2.1 2.6e+02 3.7 0.2 3 23 117 137 116 137 0.94 3 21 0.07 8.8 8.3 0.4 2 23 160 181 159 181 0.97 4 21 0.0035 0.43 12.4 0.1 1 23 185 207 185 207 0.95 5 21 0.097 12 7.9 0.2 1 20 212 231 212 235 0.76 6 21 0.023 2.9 9.8 0.5 1 23 241 264 241 264 0.95 7 21 0.00073 0.092 14.5 1.5 1 23 271 294 271 294 0.98 8 21 2.5e-05 0.0032 19.1 0.7 3 23 302 322 300 322 0.97 9 21 0.0001 0.013 17.2 1.0 1 23 396 418 396 419 0.96 10 21 0.31 38 6.3 0.1 2 23 446 468 445 468 0.93 11 21 0.011 1.4 10.8 4.7 1 23 490 512 490 512 0.99 12 21 7.2e-05 0.0091 17.7 0.5 1 23 516 538 516 538 0.98 13 21 0.0032 0.4 12.5 0.1 1 21 572 592 572 595 0.90 14 21 0.044 5.6 8.9 1.3 1 21 602 622 602 623 0.91 15 21 1.9 2.3e+02 3.8 1.0 1 23 675 697 675 697 0.92 16 21 0.013 1.6 10.6 0.3 3 23 724 745 722 745 0.96 17 21 0.0023 0.29 13.0 5.4 1 23 767 789 767 789 0.99 18 21 6.4e-06 0.0008 21.0 2.2 1 23 793 815 793 815 0.98 19 21 0.0023 0.29 13.0 0.1 1 23 820 843 820 843 0.92 20 21 0.016 2 10.3 1.5 1 23 849 872 849 872 0.96 21 21 0.021 2.6 10.0 0.2 1 23 878 901 878 901 0.95
Sequence Information
- Coding Sequence
- ATGAATAgaCACCGCCGGCAAACAGAAAATGAGACTGTGATAAAGATAGAAGCAACTGAAAAACTTGAGCAGTTGCTTAAACAGAGGCCCAGATACCAAAGGAGCGCTAGAGCCGAAGCTCGATTTGCTACCAAGAAAAATGCTAATGCCATTATAGAATGCTGGTCGGTTTGTCCTTTTAGATGGAAGAGGAATAGATTCAAATGCGCGTACTGTGAAGCCAACTTCACCGATTGCACTCTCTTAAGGGACCATGTTGCGACTTGCGCGTTGCAGCATAACGTGAAAGACATATATAGCAAGTTTAAGGAAATGTCTCTTATAAACGTCGACGTGACTGAAGCTTTTTGCCGTATTTGCTCTGTTCCATACTCTGACGTCAATCAAATGCGTGATCACGTCACTCAACACGGTTACGAATACGATAATAATCACCTAGACGGTGTCTTACCTTTTTGGCTCGACAAGGAATCTTGGCGTTGTGTAATATGCTTGGAGAAATTTAACAATTTCCTCAAACTCTACGAACACATGAACATTCATTACCAGCATTATATTTGCGCGACTTGTGGTAAAGGCTTCATGACGGCACCGCGATTAAGAAAGCACTCGGAAGTACATATAACTGGTTCGTTTCCTTGTAACGAATGTGGAAGAATATTTAATATGCGAGCTGCAAGAGATTACCATAAAGCTCGAGCACACGCTAAGGCTCCCCGATATGAATGTCCACAGTGTAATATGCGTTTCGATGGCTATTACGATAGGATGAACCATTTGAACGAAACTCATAGCGAGAAAGAAGTTTCGTACAGTTGCCAACATTGCGAATTGTCTTTTAAAACTAGCGGGAAACGCGCCATTCATATCAGGTCCGTTCATTTCACTCATCGTGATTTCGGATGTCCATTCTGCGAGTGGCAGTTCAAAACGTCATATGAACTCAAACGTCATATGGTGAAACATACAGgtTCCGCTAATGCGGAGGAAAATGTAGGCGCGATTAGACGAGTTAGGAAGTTAAAGGAGAACGTAAGTGCCCGTCAGATGCTCAGACGCCGACGCGCAAACAACGAACTCCCTGAAGAATCTGAGAGACGTATCTCGAAAACAATGATGCGAAGGAACGCTATGATTATTCTGGAATGTTCCACGGCATGGGCGTTCCGGTGGTTTCACAGCGCGTTTTATTGTTCGTATTGCGACGCCAAGTTCGTTGATGCTACCCCATTGCGTGAACATGTTCGAACTCATCATCTTAATGAACCACCTACTAAACGTGTTTTCGCAAAATTGACGGAAAATAATATGGTTAAGATTGACATTGCTGAGCTTAgatgtaaattatgtaatatccCAGTTGACACCatagataatataaagaaaCACTTAGTTTCTGTGCATGGTAAAATTTTCAATCAGAGCTACAGCGATGGCGTGTTGCCTTTCAAATTAGATCAAGACGGTTATACCTGCCAGAAATGTTTCCAACATTTTATTAGTTTCTCCAAAATGAACGAACATATAAATACACATTACCAGAATTATGTTTGTGATGCATGTGGCAAAGCCTTCGTTTCAAAGTCTCGTTTCCGTACTCATGTGCAGTCTCACGAAATAGGGAGCTTTCCTTGTGGAGAATGTGAATTGGTGCTAGATACCAGAGCAACTAGAATGTGCCATAAGTTAAAAGTCCATCGTAAAGGCATTCGATACACATGTCCACGTTGTCCTGAAGTATTCACTACGTACTATGCTAGAGCAAAACATTTAGTCGATGGCCATGCTCAGCAGAGGAGGGACTACGAATGTTCTGCTTGCGGTAAATCATTTGAGACGAGTTGCAAACGCGCAGCGCATTTCCggtCGGGAGACGCCAAAACGCGAAGTCCATCGAAATCCACCAAAACATCGGTTACCGTGAAGTGGAAACGGAAGCGCAGAAAAGTTGAAGACAAAGCCAATGCCGctcgtatattaaaatactcGAACGCCATACCATTTCGATGGCAACGTGGAAAGTTCATGTGCGCGTACTGTCCAACTATCTGCGCCAATGTTACTGACATACGACACCATTCTTTAGCACACGTTAATAAAACTGACTTATTCGAAAACCCCACAGTTCGTAACTCTTTTCCTTTGAGAATAGATATAACAGATCTCGCctgtaatatttgtaatcaaAGTTTATTcacaattaatgaattaaaaacgcATTTAAAAAGCATCCATTCCAAGAAAATAAACCCTAATTACACTGATGGTTTAATACCTTTTGTGCTTACAGGAAAAGAATATCGATGCGTACACTGTGGTATGATGTACGAGAGATTCATGAGTTTGTTTCATCATATGAACAAACACTATCAAACTTTCGTATGTCACAATTGTGGAAAAGGTTATTCCAATAAACAAAAGTTACAGGCGCACCAAATGAACCACGAAACAGGCCAATTTGAATGTCCTAAATGCGATATGGTATTCTCGAATCGCGTTGTCAAAAATCGGCATGTAGCTATTGCCCACGGACGCAAAGAGCGGTATCGATGTCCGATATGCGACACATATTTTGGCTCGTATCACGCTAGGCTACGACATCTCGATAAAATGCATGGACAAAAAGTTGAATATCGTTGCGATATTTGCCCCGCTGTTTTCGGCACTAGCACGTCAAGATATTCTCATGTTAAATTGGTACAtttgaagaaaaagaaaattgaagcTTAA
- Protein Sequence
- MNRHRRQTENETVIKIEATEKLEQLLKQRPRYQRSARAEARFATKKNANAIIECWSVCPFRWKRNRFKCAYCEANFTDCTLLRDHVATCALQHNVKDIYSKFKEMSLINVDVTEAFCRICSVPYSDVNQMRDHVTQHGYEYDNNHLDGVLPFWLDKESWRCVICLEKFNNFLKLYEHMNIHYQHYICATCGKGFMTAPRLRKHSEVHITGSFPCNECGRIFNMRAARDYHKARAHAKAPRYECPQCNMRFDGYYDRMNHLNETHSEKEVSYSCQHCELSFKTSGKRAIHIRSVHFTHRDFGCPFCEWQFKTSYELKRHMVKHTGSANAEENVGAIRRVRKLKENVSARQMLRRRRANNELPEESERRISKTMMRRNAMIILECSTAWAFRWFHSAFYCSYCDAKFVDATPLREHVRTHHLNEPPTKRVFAKLTENNMVKIDIAELRCKLCNIPVDTIDNIKKHLVSVHGKIFNQSYSDGVLPFKLDQDGYTCQKCFQHFISFSKMNEHINTHYQNYVCDACGKAFVSKSRFRTHVQSHEIGSFPCGECELVLDTRATRMCHKLKVHRKGIRYTCPRCPEVFTTYYARAKHLVDGHAQQRRDYECSACGKSFETSCKRAAHFRSGDAKTRSPSKSTKTSVTVKWKRKRRKVEDKANAARILKYSNAIPFRWQRGKFMCAYCPTICANVTDIRHHSLAHVNKTDLFENPTVRNSFPLRIDITDLACNICNQSLFTINELKTHLKSIHSKKINPNYTDGLIPFVLTGKEYRCVHCGMMYERFMSLFHHMNKHYQTFVCHNCGKGYSNKQKLQAHQMNHETGQFECPKCDMVFSNRVVKNRHVAIAHGRKERYRCPICDTYFGSYHARLRHLDKMHGQKVEYRCDICPAVFGTSTSRYSHVKLVHLKKKKIEA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -