Zpyr025865.1
Basic Information
- Insect
- Zeuzera pyrina
- Gene Symbol
- -
- Assembly
- GCA_907165235.1
- Location
- OU015633.1:17442207-17448817[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0044 0.56 12.1 5.0 2 23 153 174 152 174 0.95 2 15 0.00014 0.018 16.8 6.9 1 23 180 202 180 202 0.98 3 15 5.1e-06 0.00064 21.3 0.9 1 23 222 244 222 244 0.98 4 15 8.8e-06 0.0011 20.6 1.9 2 23 252 273 251 273 0.95 5 15 9.8e-05 0.012 17.3 2.0 1 23 278 301 278 301 0.97 6 15 0.00013 0.016 16.9 5.0 1 23 325 347 325 347 0.98 7 15 0.0024 0.3 12.9 3.4 2 20 355 373 354 376 0.92 8 15 0.00046 0.058 15.2 0.8 1 23 382 404 382 404 0.98 9 15 5.1e-05 0.0064 18.2 2.4 1 23 410 433 410 433 0.96 10 15 9.4e-08 1.2e-05 26.8 1.3 1 23 439 461 439 461 0.96 11 15 3.9e-05 0.0049 18.5 0.3 1 23 467 489 467 489 0.97 12 15 0.0034 0.43 12.4 1.7 1 23 495 517 495 517 0.96 13 15 4.6e-05 0.0058 18.3 4.8 1 23 523 545 523 545 0.98 14 15 1.1e-06 0.00014 23.4 2.2 1 23 551 573 551 573 0.98 15 15 7.9e-05 0.0099 17.6 0.8 1 23 579 601 579 601 0.96
Sequence Information
- Coding Sequence
- ATGCATGATATTTTTGCGGAACTAAATAATGAAAGTGCAATAAAGATAGCTGACATGTTGTTGTCATGTACTTCCATAAAGGTGGAAATGAAAGACTTCCttcctaaaaaaatatgtgatagCTGTTATGAGTGTTTGTTTAGATTCTATGATTTCCAAAAACTAGCATTAGAAACAGAAGGGAAATTACGAACACGGTTATGTAGTGGAAACAATAATTTAGAGTTTGATCATAATAAATGTTCAGAGGCGGAAAAAGTGGAAGTTAAAATTGAATATGACGATTTTGAAGCCATTGGAAGTAATGGGGTTGGAGAAAATTCCACTGATTTTAATCAACCAGATTTAGTGAAAAATGAATATCTTTATAACGAAAAATGTATAATTCCATTTGCAAGCTGTGACCAAGTTGAAGGACTTCAAGAGAATAATAGTGATATAGATAATAGATCATTAGAGTGTGATGTATGccataaaagatttaaaaagttaacaaaattaGAACATCACAAATTATTACACAATTCAGAGAATGTTCATAAATGCAATTTATGTTCTAAAGCATATAAACATCAGTCTAAATTGTTCAAGCATTTACTTACACATGACAATGATGAAGCACAGGCCTACATATCACAATTAAGCCAAAATGAAACCCAAAGTTATGAATGTGACAAATGTTCCTCTGTTTTCAAAACACCACATTCGCTAATTGCTCACATGAAAATACATGTTAGTAAAGGCAGAGTATTATCATGTTCAATATgtgataaagtttttaaaaaaatcagtcaTTTAAAAAGGCATGAAATATCacatagtaatattatatataactgtactatttgcaaaaaagcattTATAACTATGAGGCATTTGAATGAACATGTGAGTACACAACACTCGAGACaacaaaacgaaataaaacCATTGTTATCTGAAATACAAGAAACTGAAGTTAAGGAAGGCTACCATCAATGTGATACATGCTCATGCATGTTTAAGTCTTCTCAGTCATTAGCTGCTCATATGCGGAAGCATGTAAATAAGAACAGGATATTGTCTTGTGCAATATGCAGTAAAGTATTTAAGAAAATCAGCCATTTAAAAAGACATGAGCTATGTCATGATGATAATAGGCCTTACAAATGTACAGAATGCCCAAAGGCATTTCTTACAGAATATGCATTAAAGGAACATTTCAATAAACACCAAGGTATTAAGCAACACTCATGTCCAGTATGCCCAAAGTCATATTACCATGCTACCACTTTGAATAATCATCTTCAAAAAGTTCATACAAGAGAAAGAGCATATTTATGCCCTACTTGTGGAAAAAAGTTTGAATCTAGCACAAATTTGAATCAGCATATGAGGAGGCATTTGGGTCTAAAGTTGTTTGCTTGTAGTTATTGCCCACAGAGGTTTGTAAGCAAagGTGAATTAAATTCTCATACTGTGACTCACACTGGGGTACGGGCACACACTTGTGATCAATGTGGAGCATCGTTCACTAAAGGCAGCTCACTCGTCCTGCACAAGTTCAGACATTCTGGTATAAAACCTCATCAGTGTGATGCGTGTAATATGAAATTTGCAACAAAAGATCATTTGAAGCGCCATTACCGTATTCACACTGGGGAGAAGCCCTATCACTGTAACATCTGCGGGCGAGCATTCACTCAAAGCAACGATCTCGTTAAACACAAGCGTTCACATTTAGGAGACAAGTTGTATAAgTGTTCTCAATGTCCAGAGAGTTTTCGTCTGAAAGCAGAATTACGTCAACACACTTCTGATCACTTTTTAACATCAAAAgctgtaagtgaaaagaaaactGAAGACAGCTCAGTTCAAAGTAATGTCGGAAATAAACAGGAACAGATTCCTACTGAAGGCAGTGATCACAAATGTGAAACAACAAATGTCTAA
- Protein Sequence
- MHDIFAELNNESAIKIADMLLSCTSIKVEMKDFLPKKICDSCYECLFRFYDFQKLALETEGKLRTRLCSGNNNLEFDHNKCSEAEKVEVKIEYDDFEAIGSNGVGENSTDFNQPDLVKNEYLYNEKCIIPFASCDQVEGLQENNSDIDNRSLECDVCHKRFKKLTKLEHHKLLHNSENVHKCNLCSKAYKHQSKLFKHLLTHDNDEAQAYISQLSQNETQSYECDKCSSVFKTPHSLIAHMKIHVSKGRVLSCSICDKVFKKISHLKRHEISHSNIIYNCTICKKAFITMRHLNEHVSTQHSRQQNEIKPLLSEIQETEVKEGYHQCDTCSCMFKSSQSLAAHMRKHVNKNRILSCAICSKVFKKISHLKRHELCHDDNRPYKCTECPKAFLTEYALKEHFNKHQGIKQHSCPVCPKSYYHATTLNNHLQKVHTRERAYLCPTCGKKFESSTNLNQHMRRHLGLKLFACSYCPQRFVSKGELNSHTVTHTGVRAHTCDQCGASFTKGSSLVLHKFRHSGIKPHQCDACNMKFATKDHLKRHYRIHTGEKPYHCNICGRAFTQSNDLVKHKRSHLGDKLYKCSQCPESFRLKAELRQHTSDHFLTSKAVSEKKTEDSSVQSNVGNKQEQIPTEGSDHKCETTNV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -