Zpyr015391.1
Basic Information
- Insect
- Zeuzera pyrina
- Gene Symbol
- -
- Assembly
- GCA_907165235.1
- Location
- OU015626.1:8761841-8796290[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 9.6e-05 0.012 17.3 1.5 1 23 423 445 423 445 0.96 2 20 0.11 14 7.7 1.0 1 20 451 470 451 473 0.94 3 20 3.3e-05 0.0042 18.8 4.6 1 23 492 514 492 514 0.98 4 20 2.5e-05 0.0031 19.1 3.4 1 23 520 542 520 542 0.99 5 20 4.1e-05 0.0052 18.5 5.3 1 23 548 570 548 570 0.97 6 20 2e-05 0.0025 19.5 6.7 1 23 576 598 576 598 0.97 7 20 8e-07 0.0001 23.9 2.9 1 23 604 626 604 626 0.97 8 20 0.00011 0.014 17.1 6.7 1 23 632 654 632 654 0.97 9 20 2.2e-05 0.0027 19.3 6.4 1 23 660 682 660 682 0.98 10 20 5.4e-07 6.8e-05 24.4 1.9 1 23 688 710 688 710 0.98 11 20 5.6e-05 0.007 18.1 7.9 1 23 716 738 716 738 0.98 12 20 9.3e-06 0.0012 20.5 6.4 1 23 744 766 744 766 0.98 13 20 3.5e-06 0.00043 21.9 6.7 1 23 772 794 772 794 0.98 14 20 2.5e-06 0.00032 22.3 4.9 1 23 800 822 800 822 0.96 15 20 2.5e-05 0.0031 19.2 7.1 1 23 828 850 828 850 0.97 16 20 3.4e-06 0.00043 21.9 6.0 1 23 856 878 856 878 0.98 17 20 3.4e-06 0.00043 21.9 6.9 1 23 884 906 884 906 0.98 18 20 1.2e-05 0.0015 20.2 3.2 1 23 912 934 912 934 0.96 19 20 0.00061 0.076 14.8 0.3 1 23 941 963 941 963 0.96 20 20 4.5 5.6e+02 2.6 7.7 1 23 972 994 972 994 0.99
Sequence Information
- Coding Sequence
- ATGAATCCAGACCATCATAATTTGAACACGGGTGGCGGCCAGCCTGCTGGAAATTCTGAGTCTCAGAACCAAAGAGTTCAGTCCGGGCAGCAACAAGCAAACAATTTGACCCCTACAACATCTGCTACTGATCTACGAGTGAACTCTGCGGCGGTGAACGTCGCTTTGTCTAGTGTCGCGAAATATTGGGTGTTTACAAACTTATTCCCTGGACCGATACCACAAGTGTCTGTGTATGGTTTGCCAACCGGTGCTAGAATTGAGAATGGAAAGCCTATTCAgGATCTTGGTCAGACACATGCAAGTATACTCAATGGTGATCCTAACATTATTCTTGGGCATCATGCGGGACAACCTCAAGTCACTGTTTCAGCAGCTGGTGCACAACAAATTCCTGTTTCACAGATTATTGCTACGCAATCTGGACAACAGGCTCATGAAACACTGGTGGCCCACACCCAACAACAAGATATGGCCTCGCAGCAAGGTTCCAGCAACACACAGGTTGCTGTTAGTGCAGGTCAACCCGCCCATCAGCAGGTACCCAATCAAAGGGTCGAGTTTGTACAACACCATAACATTGATATGGGTCATCATTCACAACAACAGCACATAATGCAACAACAGTTAATGGCAACAGCTCGTCCTGAACATGCTAATCAACagATCCAGTTAACAGTCAGTGAAGACGGCATTGTCACGGTGGTGGAACCAGGGGCAAGCAAACTAGTTGATAAGGAGGAGCTACATGAAGCCATCAAAACCCCTACTGACCATTTCCTGAGTGTTCATCACTTGCAGCAGATTGTTGGACAACAGGTTATTGACAGTGTTGTTCGCATTGAACAAGCGCCTGGTGAACCAGCGAATATATTAGTTACACACAACCCTGACGGTACTACGTCTATTGAAACTAGTGCGGCCGATCCCCTAATTGTGAAAGATGAAAAGGCCGGAGCTAAGATTGAAACTGCGCAATTTGCTATACCTGCTGAAATAAAGGATATAAAAGGAATTGATTTGAAGagTGTAGGTGCGATGGGTATGGAAGGTGCAGTAGTGAAAATATCAGCAGGGGCCTCAGATCATGATCTCCATGCTATGTATAAGGTCAATGTCGAAGATCTCTCTCAACTGCTAGCTTACCATGAGGTGTTTGGTAAACTTAATTCTGAAGGCCAGCAGCAAGCTAAGGTAATTGGCGAAGTTGAAGTCGAAGCCGGAACAAGTACTGCAATGTCAGAGCCAGAATCTTCACCTGGTCACCATGCTTGTGATATTTGcggaaaaatatttcaatttagatACCAACTGATTGTACACAGACGTTATCACGGCGAGCGAAAACCGTACACGTGCCAAGCATGCGGTTCTGTCTTCGCCAATACAGCTGAATTGTCAAAACATGGAAAATGCCATCTTGCTGGAGATCCTGCTGAGAGACATGCGAAAAGGTTATCGCAAGATAAGCCATACGCATGCACAACTTGCCATAAGACGTTTGCCCGCAAAGAACACCTCGACAATCATGTTCGCAGTCACACTGGGGAAACGCCATACAGATGCCAAATCTGTGCGAAGACATTTACGCGCAAAGAACACATGGTCAACCACGTTCGGAAGCACACGGGCGAAACTCCGCACCGTTGTGACATCTGCAAGAAGAGCTTCACAAGGAAGGAGCATTTCATGAACCATGTGATGTGGCATACTGGTGAAACGCCGCATCATTGCCTAATTTGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGCCAACCATATGAGATCACATACAAACGATACTCCGTTCCGGTGCGAACTATGCGGAAAGTCCTTCACCAGAAAGGAACACTTCACCAATCACATATTGTGGCATACTGGTGAGACACCACACCGTTGCGATTTCTGCTCAAAAACATTTACCCGTAAGGAGCACCTGTTGAACCACGTCCGGCAACATACGGGCGAATCTCCGCACCGATGTAACTATTGCTCCAAATCATTTACGCGACGGGAGCATCTCGTCAACCATGTCAGACAACACACCGGAGAAACACCCTTCCAATGTGGCTACTGTCCTAAGGCCTTCACCAGAAAGGATCATCTCGtaaACCATGTTCGTCAACATACGGGGGAATCCCCTCACAAATGCTCGTTCTGCACAAAGTCTTTCACCCGTAAGGAGCACCTCACGAACCACGTGCGCCAACACACGGGAGAGTCGCCTCACCGGTGTTCCTATTGTGCTAAATCCTTCACGCGGAAAGAGCATCTTACAAACCATATCAGACAACATACGGGCGAAACGCCACACAAGTGTACGTTCTGCCCGAAGTCGTTTACAAGGAAGGAGCATCTCAACAATCACATCAGACAACATACGGGAGATAGGCCTCACGCCTGCTCTTACTGTAACAAGAGCTTCTCCAGGAAAGAACATTTGGTTAATCATATCCGACAACATACTGGAGAGACCCCGTTCAAGTGCACCTACTGCTCCAAATCATTCTCGCGCAAGGAGCATCTCACCAACCACGTGCACCTCCACACCGGCGAGACACCGCACAAGTGCCCCTTCTGTACGAAAACATTCTCAAGAAAGGAGCATTTGACCAACCACGTGAGAATTCATACGGGGGAGTCGCCACATCGCTGCGAGTACTGTCAAAAAACGTTTACACGGAAGGAACATCTTATAAACCACATGAAGCAACATACTGGGGATACACCACACGCGTGCAAGGTGTGCGCTAAGCCGTTCACGAGAAAAGAACACCTTGTCACGCATATGAGATCGCATAGTTGCGGCGAGCGTCCATATAGTTGCGGCGAGTGTGGCAAGTCTTTCCCTTTGAAAGGCAATTTGCTGTTCCACGAGAGGTCTCACAACAAGGGTAACGCCGCAAGACCCTATCGATGTGATATTTGTTGTAAAGACTTTATGTGCAAAGggCATTTAGCGTCTCACAGGCGCACTCATGCTGAAGCAGGCGAAGGAGGTGCTAACACGACCGATACGGCCCCTGAAAGCGAGGAATTTGGTGATTGTATTAAATGTGAAAAAGAACCCGAACGAACTGAAAGAAAACATGATATAAGGACTCCGACAGAAAATAGACCGGTGGAAACCAATGTTCCACAAAATCAACAAAATAGTACTACTGTGATGCAAATAACTAGCCAGGTCCGCGCGGGcacgggcgcgggcgcggcggtgTCGTCGgacgcggcggcggcgggggtggcgggcgcggcgggcgcggcgggggtggcggcgggcgcgggcgtgGGCGGCGGCGGCGCAGCGGGCTCGTTCGGACACGCGGCCGGCGGCCAGCACCACGCCGGCGCCGCCATCGCGCACCACCCCGTCACGGTCAACTACTAG
- Protein Sequence
- MNPDHHNLNTGGGQPAGNSESQNQRVQSGQQQANNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPIQDLGQTHASILNGDPNIILGHHAGQPQVTVSAAGAQQIPVSQIIATQSGQQAHETLVAHTQQQDMASQQGSSNTQVAVSAGQPAHQQVPNQRVEFVQHHNIDMGHHSQQQHIMQQQLMATARPEHANQQIQLTVSEDGIVTVVEPGASKLVDKEELHEAIKTPTDHFLSVHHLQQIVGQQVIDSVVRIEQAPGEPANILVTHNPDGTTSIETSAADPLIVKDEKAGAKIETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISAGASDHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQQQAKVIGEVEVEAGTSTAMSEPESSPGHHACDICGKIFQFRYQLIVHRRYHGERKPYTCQACGSVFANTAELSKHGKCHLAGDPAERHAKRLSQDKPYACTTCHKTFARKEHLDNHVRSHTGETPYRCQICAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCLICGKKYTRKEHLANHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCSYCAKSFTRKEHLTNHIRQHTGETPHKCTFCPKSFTRKEHLNNHIRQHTGDRPHACSYCNKSFSRKEHLVNHIRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEYCQKTFTRKEHLINHMKQHTGDTPHACKVCAKPFTRKEHLVTHMRSHSCGERPYSCGECGKSFPLKGNLLFHERSHNKGNAARPYRCDICCKDFMCKGHLASHRRTHAEAGEGGANTTDTAPESEEFGDCIKCEKEPERTERKHDIRTPTENRPVETNVPQNQQNSTTVMQITSQVRAGTGAGAAVSSDAAAAGVAGAAGAAGVAAGAGVGGGGAAGSFGHAAGGQHHAGAAIAHHPVTVNY*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01030446;
- 90% Identity
- -
- 80% Identity
- -