Basic Information

Insect: Zeuzera pyrina
Gene Symbol: -
Assembly: GCA_907165235.1
Location: OU015631.1:8017434-8019426[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.9e-08 1.1e-05 26.3 0.1 4 38 18 52 17 57 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.9e-08	1.1e-05	26.3	0.1	4	38	18	52	17	57	0.90

Sequence Information

Coding Sequence: ATGGTAcgtaattataagaaaaaaaccAAAAGAGGAGAGTGGTCGATAAAGGCTATGAAAACAGCTATAGataaagtagtaagtaaagAAATGGGATATAGGACAGCTGCTACTGCATTCGCAGTGCCACAGACTACTTTAGAACGATATGTTAAGAAAATGAAAGAAGGCGGCGAAGTTACAATTGGCTTACCTTTGGGTcctaaaaaaactatatttacaaaaatagaaGAAGACGAAATGGTCGCATATCTGAAACATATGGAGGAACGACTTTTTGGCCTAACAACTGTCGATTTGAGACGTCTAGCATATCAACTAGCAGTAAAAAATGATCTATCCATTCGTAAGCCCGAAGCCACGTCAGCAGCTCGGGCAATGGGATTCAATAAAATAGCCGTAGGTAAATTCTACCAGTTGCTTGGAGATGTTTACGACAAATATAAATTCACCCCtgacaaaatatataattgtgaTGAAACTGGTATCTCAATTGTGTCTAAAACCAAGAGCAAAATACTAGCTATGAAAGGTCGGAAACAGCGAATGAAAGCAGAATTGCTAGATCACGCTCTACCAGGTACTACAGCAGTATGCAATCCTCGAGGCTGGATAACAACTGAAATATTTTCGACATGGTTCAAACAGTTTATCCAATTTTCAGGAGCTACTCCTAATAATCATGTGTTGCTGCTTCTGGATGGACATGTGAGCCATACCCAAAATTTGGAAGTAATCGATCTAGCACGTAAAAATGGAGTTATTATACTTTGCTTTCCTCCTCACTGCACACACAAGATGCAGCCAGCTGACGTCGCTTTTATGAGACCACTCAATACTTATTACGATCATGCTGTTTCGGGTTGGTTGAGATCACACCCAGGGCGTGTAGTAACTGTATTTCaaataagtgaaatatttgGAAACGCATACGTTCAGGCAGCTACAATGTCTACAGCTATTAACGCATTTAGAAAGTGTGGTATATGGCCgtacaatcaaaataattttacggatGCTGATTTCATTTCTGCTGAAACTactgatataaaatatattgaaaagtcATCAAATGTAGAAGAACGAAGGGCTACAGAGGCCGAAGAGTCTCAATCTTTGGCAGTTACAATTGCGTCTTCATCTATAGCAGTCACAACTGTAACTGAAACAGTTGCAACAACGTCTGAAACAGGAACAGTTGCAACTGAGTCTGAAGCTACAACAAAATCGCGATCTCCTACAGCTAGAATAGAGTTGATTACAGAATGTTCCGAGCAAGTCACACCTACTGTAGACGAAGCTCCTGCCATAGATCCTGCCCCCGGATATTCTTTTGCTTTTAAATATCAATCTCCCATCCGTGCAGTATGCCGCGATTTGACGTCTAGCTTTAATAATGTATCCCCTAATGATATTTTGCCAATTCCCTCAGTTCAGCGGACTGAAAAGAGGAAGCAATACCGAAGAGGAAAAACGGCCGTAATTACTTCAACTCCTTACAAAAACGAACTGGAAAATATAAAAAGGCCGAGGAAATTGTCCAATCCTGATGATCCTCGTCTGAAAAAAAATGCTaagaataaacaaaagaataaaaaagaaaatgaggCCAAAACTCAAAATAACGATGATGAAGATACCATATGTCTTTATTGTAATGATATAAATCATACTTTTCTGAAATCGTCAGAAGGTTGGGTAGGCTGCCAGCTTTGTGGACGTTGGGCTCACAATGCTTGTGCCGGTGTGGATGATGGAGACACAGAAGAAATCCACATTTGTGTTCATTGTGACAATAATTAG
Protein Sequence: MVRNYKKKTKRGEWSIKAMKTAIDKVVSKEMGYRTAATAFAVPQTTLERYVKKMKEGGEVTIGLPLGPKKTIFTKIEEDEMVAYLKHMEERLFGLTTVDLRRLAYQLAVKNDLSIRKPEATSAARAMGFNKIAVGKFYQLLGDVYDKYKFTPDKIYNCDETGISIVSKTKSKILAMKGRKQRMKAELLDHALPGTTAVCNPRGWITTEIFSTWFKQFIQFSGATPNNHVLLLLDGHVSHTQNLEVIDLARKNGVIILCFPPHCTHKMQPADVAFMRPLNTYYDHAVSGWLRSHPGRVVTVFQISEIFGNAYVQAATMSTAINAFRKCGIWPYNQNNFTDADFISAETTDIKYIEKSSNVEERRATEAEESQSLAVTIASSSIAVTTVTETVATTSETGTVATESEATTKSRSPTARIELITECSEQVTPTVDEAPAIDPAPGYSFAFKYQSPIRAVCRDLTSSFNNVSPNDILPIPSVQRTEKRKQYRRGKTAVITSTPYKNELENIKRPRKLSNPDDPRLKKNAKNKQKNKKENEAKTQNNDDEDTICLYCNDINHTFLKSSEGWVGCQLCGRWAHNACAGVDDGDTEEIHICVHCDNN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -