Zpyr019057.1
Basic Information
- Insect
- Zeuzera pyrina
- Gene Symbol
- -
- Assembly
- GCA_907165235.1
- Location
- OU015628.1:19910392-19914140[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8 7.1e+02 1.3 0.0 25 34 2 11 1 22 0.77 2 2 1.7e-10 6.7e-08 33.4 0.1 2 44 58 100 57 101 0.95
Sequence Information
- Coding Sequence
- ATGCGCTTTGGAGTACCGGCACCGGTGTTGGGGTCACTTAGACCTCAACGACGCCAAGAAACCCATTTATATACATCGTATTTTGGAGCCACAGTATTTCTCTTTCAACCATATACTTCATgTCATGAAACGCCGCGTTTTAAACGTAGACGTGTTAGAGGTCTTTGGAGTGAAGCTGACATGAAGTCAGCGATATCAGCTATTAATAGTGGACAAATGAAAGTtttaacagcatcgaaatattaCAATGTTCCCAGACGAACTCTCCGACGATATCTTGCAGAAAAAATGGACACAAAGTTAAAGCTGGGAAGAAAACCGCATAGTAAAAGAAGCTAG
- Protein Sequence
- MRFGVPAPVLGSLRPQRRQETHLYTSYFGATVFLFQPYTSCHETPRFKRRRVRGLWSEADMKSAISAINSGQMKVLTASKYYNVPRRTLRRYLAEKMDTKLKLGRKPHSKRS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -