Zpyr027206.1
Basic Information
- Insect
- Zeuzera pyrina
- Gene Symbol
- retn
- Assembly
- GCA_907165235.1
- Location
- OU015634.1:15184901-15198706[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2e-20 1.1e-16 62.3 0.0 15 89 95 167 85 167 0.94 2 3 7.7 4.4e+04 -3.7 0.0 23 38 206 221 199 222 0.74 3 3 1.1 6.1e+03 -1.0 0.0 3 26 249 280 247 311 0.60
Sequence Information
- Coding Sequence
- ATGGCTCATGTCGATAGAATCACCGTTAATCATCCACGTCACGCAGTTTTCTGTTCAGATCAAAGGCAAGGTGTACAATCCAATGAAACTTACCGACCAATATCTTCAGATCCACTCCACCCTTTGCTTTGTACATCTGCACGACTAACTCAGGTGGTTTTGTATGGAAGTCAGGTGTCTTATGTTCTGGCTGAAAAGAATGTCGCGCACCATAAAAGATTGACGCGTGTTTCGATAACTCAAAGCAACATAGTATGGGGTAATAAAGGTTCGCAGTTTGGTCAACATGGTACACCTATAAACCGGCTGCCAATAATGGCGAAGTCGGTGCTAGATCTCTACGAGCTATATAACCTAGTGATAGCTCGGGGCGGGCTCGTCGAGGTCATTAACAAAAAGCTCTGGCAAGAGATCATCAAGGGCCTCCGGTTACCTTCGTCCATCACATCGGCTGCTTTCACATTACGCACACAgtaCATGAAATACTTGTACGACTACGAATGTGAGAAGAAAAATCTGTCTACACGTACTGAATTGGACGCAGCCATAGAAGGCAATAAAAGGGAGGGTCGACGGTCCTCAGGACAGTATGAGGCTCAGGCAGCACTTGCTATGCCGCCCATGAACCGCGGTGTTCCCGTCTCGCTCGCACAGCTGTCCCAGCACATGCCGCCGCTGGCCCTCCCTCTCGCAGGCGGTGTCGCGGGCATGCCGCGGCTTCCTGCGATGCCGCCGCACGCCCCACACGAGTTCGAATACCGCCTCAGAGAATACATGAAAATGTTCAATCAGCACAGAGAAAACATGCTGAGGAACGGGCCCGAGTCTCCGCCGACAGTCAACGGGCCAGCCGCGGCCATATCACCGCGTGATGCAGCCGCGCTGAACGCTCTAGACGTGTCACGGCTCACTTTGTGGTCTCtgtacaacaacaacaacaaccacAGTCCGCCGCAGCCGGCCGACCTAGAGCCACAGTGCGAGGCGCTCAACTTAAGCGAGAGTCCCAACAGCTCGGTCGCCAGCGGCTGCAAGCGCGAAGCGAGCCGCTCGCCATTACCGCCGCCGAAGCGAAGCCGCGCGTCGTCGGCCGCGTCGCCCGCGCCCCGCACCGCCTCCCCGCGCCTAGAGGAGCGCCACAACGGGGACGTCAACGGTGACGTCAGCGGTGACGTCAGCGCCGACGTCAGCGGAGACACTGCCGCTGACGACGACAGCGAGCCTGCGCAGAGCGCGCACGCCAGCACAAGCGGCGCCGCCTTCAAAATTACCACGAGAGGTGATGTAAGAACTGGTGATCACCAGTTAATCGTCTCCATTGAGCTGAATGGTGTGACGTACGAAGGCGTTCTTCATCCGGCAAACGGCAACGGCCAGAACGGGCGCCGGCCGGTTGTAGTGAACAAAACTGAGAATTAG
- Protein Sequence
- MAHVDRITVNHPRHAVFCSDQRQGVQSNETYRPISSDPLHPLLCTSARLTQVVLYGSQVSYVLAEKNVAHHKRLTRVSITQSNIVWGNKGSQFGQHGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRTELDAAIEGNKREGRRSSGQYEAQAALAMPPMNRGVPVSLAQLSQHMPPLALPLAGGVAGMPRLPAMPPHAPHEFEYRLREYMKMFNQHRENMLRNGPESPPTVNGPAAAISPRDAAALNALDVSRLTLWSLYNNNNNHSPPQPADLEPQCEALNLSESPNSSVASGCKREASRSPLPPPKRSRASSAASPAPRTASPRLEERHNGDVNGDVSGDVSADVSGDTAADDDSEPAQSAHASTSGAAFKITTRGDVRTGDHQLIVSIELNGVTYEGVLHPANGNGQNGRRPVVVNKTEN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -