Basic Information

Gene Symbol
osa
Assembly
GCA_907165235.1
Location
OU015638.1:12859686-12905002[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-26 1.3e-22 81.3 0.0 2 89 409 493 408 493 0.94

Sequence Information

Coding Sequence
atgggtCGGACGGAGCGCGGTGCGGCGTGCCGTCGCAATATCAGCCCGGTGAAATCGCTCGCCCGCCCGCTTCGCCGCACCGCGCGCCTCGCCTGCGCCAGTCGCCGTGCGCCAACTGAAACGCGCGCACCGCGCTACCAATCGAACGTATCTCATACGAGTCTCGCGTTCCCTGCAACTCTATCGTTGTTGTACCCCGGCTCTCCCTGCGCCTTTTCTCGGTCTCGTTTGTCTATTCGAAGCGTGCCCCATCGAGTGAGTCGCTCGGAAAAATTCAAGACGGCCGTCATCATAAGGCTGCCCGCGAATACAGATCTGACCGGTCAGAACAGCAATGACTCGGGCGGCAGCGGTGGCGCTGGGCGCGCTACCACGCCGCATTTGAGGCCCACGCCTAGCCCCACCGGCTCATCTAGTGGCTCGCGATCCATGTCACCGGCTGTCGGTACGCAGAACGTACCGATGCCGCCGCGGCCATCGTCGTCGCTATCGGACGGCAGCGGGCCGACGTCACGGCCGGGGGCTGGCGCGGCGCCGGGGCCGGCCCCTAGTCCGGTGCCACCACCCGGCGCGATGGTTACTCAACCTTACCCGCACCACGGCTACAAATCGCCGCATTACCCGCCTCAGCCGTACGTGTACCCGCCCAGGAATCATCATCCGTACCCGTACGGAGCGTACAGACCACCGCCACCTCCGCATGGACCCCCGCAGCATTATCCTCCGCTCAAGCAACAAGCTCGTCACATGGGCCCCCCGGGGGCAGCCGGGCCTGGCGGGCCGGGCGGGCCGGGCGGGCCGGGTGGTCCACCGGCGGGGGCGCCGGAGGGCGCAATGCCACCGCCCACGGCGCCGGGCGAGGCGCACGACAACGGGCCCGCGGCGCCCGCCACGGCGCTCGTCACCACCGGCCCGGACGGCGCCCCGCTCGACGAGGGCAGCCAGCAGAGCACGCTCAGCAACGCCTCGGCCGCGTCCGGCGAGGAGACGTGCGGCACGCCGAAGACGTCGCGCAAGGAGTTCGGCGCGGGCAGCGCGGCGCCGTCGCCGTCTCCGGGCGGCGGCAGCCACTCGTCGGCGCACGACGACTACGACGCCTCGCCCTCCAGCTGGCCGCGCCCGCCCTCCAGCCCGGTGTTTAACAGTCACATACCGCCGGAGTCCTACAGATCGAAGAAGTCGGACTCGCTCGGCAAGCTGTACGAGATGGACGACGCGCCCGAGCGGCGCGGCTGGGTGGAGCGGCTGCTGGCCTTCATGGAGGAGCGGCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTCGATCTCTACCGCCTCTACCTGCTGGTGCGCGAGCGCGGCGGCTTCGTCGAGGTGACGAAAAACAAAACGTGGAAAGACATAGCAGGTCTTCTGGGCATTGGTGCGTCGTCCTCAGCCGCGTATACTTTACGCAAGCATTATACCAAGAATCTGTTGGCGTACGAGTGTCATTTTGACCGTGGCGGAATTGATCCACAACCAATCATCAATCAAGTGGAAGCCTCCACAAAGAAGAAAGGCGGGAAATCGAATAGTACATCTAGTGCAGGGTCATCAAATTCACAAGAGACGTTTTCGGGCGGCAGCACGGCGGCAAGCGGCTCGCCCATGGACGGGTACGGCGGCCAATACGGCGGGTACCCGCCGCAACCCAACCAGGCGCAAGGCGGCGGGCCCGGCGGGCCCGGCGGTGACAACCTCGCCGCCTCCAATCCGTTCGACGAGCCGCCGGGGCCCAGGAGACCCCCAGGTTACCAACAAGGTTACGGATACGACTACGCATCACCTTATCCATCAAATAGGCCTGTTTATCCACCGTATGGTCCAGAAGGAGATAGAGGTTAtggcggcggcggtggcggcgaATACCGCTACGGCGGGTACGGCGGCGGGTACCGGCCGGGCGCGCCGGCGCCGGCGGGCACGCCGCCGCCCGCGCAGCCCTACCCCGACTACTACCGGCCGCAGCACCCGCCGCACCCGCAGCACCCGCCGCACCCGCCGCACCCCCCGCACCCGCCGCACCCGCCGCATCCGCCGCATCCGCAACACTCGCCGCAACAGCCGCACGAGGTTCACTCACTTTTATCATTTGATAATTAA
Protein Sequence
MGRTERGAACRRNISPVKSLARPLRRTARLACASRRAPTETRAPRYQSNVSHTSLAFPATLSLLYPGSPCAFSRSRLSIRSVPHRVSRSEKFKTAVIIRLPANTDLTGQNSNDSGGSGGAGRATTPHLRPTPSPTGSSSGSRSMSPAVGTQNVPMPPRPSSSLSDGSGPTSRPGAGAAPGPAPSPVPPPGAMVTQPYPHHGYKSPHYPPQPYVYPPRNHHPYPYGAYRPPPPPHGPPQHYPPLKQQARHMGPPGAAGPGGPGGPGGPGGPPAGAPEGAMPPPTAPGEAHDNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEETCGTPKTSRKEFGAGSAAPSPSPGGGSHSSAHDDYDASPSSWPRPPSSPVFNSHIPPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRERGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKGGKSNSTSSAGSSNSQETFSGGSTAASGSPMDGYGGQYGGYPPQPNQAQGGGPGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYDYASPYPSNRPVYPPYGPEGDRGYGGGGGGEYRYGGYGGGYRPGAPAPAGTPPPAQPYPDYYRPQHPPHPQHPPHPPHPPHPPHPPHPPHPQHSPQQPHEVHSLLSFDN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-