Basic Information

Gene Symbol
pnr
Assembly
GCA_031772095.1
Location
CM062651.1:11589112-11598550[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.53 1.5e+03 -0.5 0.8 1 6 231 236 231 238 0.90
2 2 1e-15 2.9e-12 46.6 2.4 1 34 813 845 813 847 0.98

Sequence Information

Coding Sequence
ATGTGTAATGTACCACCTAAGTTCTTTCAAGTTTGTCGTTTATGCCTTACTTTGGTCAAAGAGCATGACGTTGAGGtgctgcaaatatttaattcatcatcatcagcagcagcTACAGCTACGGCGACGACGAATGATACGTTTGGCTCTGAAAATGAAGCTAAAGAAATCACGGAAAATACCCCCAACCAACAGTTTCACCACTATCATAAACATCCTCGTCATATCCAATCACTACATTACGGAAGGCCACAAAGTAGCTGCAGCACAAAAAATGATTGTAGCTCTGATAACCTATCTCTATCCCCTGTACCAATTTATAAGAGTGAGGAAGAGATACCAGATAATAAACTAAGTACATTTGTGCCGATTGTGCCTTCTTCCATTGCTACAACGGAGACTTCTACATATGGAATCGGTCAATTGATGTCTAAATCATTGGAAAAAAACGAGGTGGGGGGCTTTTCAATAACTAATCCACAAATACAAGTAGAAAATGCCACACATGTGAAACGCAAGATTACATTATCCAATGATAACGAAGAAGGCAAAAGCAATGATGGCATATCTCTGGGAGAGGAGGTGTTCAAGAAGGAAAACCATGATGATTCATCACCACATATTACCATTCAAATACTCAGCTGTCTCTCTATAAAGATTTCTCCAGGCGATGGTTTGCCCGCCATTGTGTGTAGTAACTGCAGAACACAATTGAATGCATTTTGGAACTTTCGATTGATGGCTCAAAAAGCAGATTTTACATTAAAAGAATTAACGAAATTCTCTAAACACAATTCTGCCGAACCCGATACTCGTTTCGCAGGTCACTCAAAATCGCCACCATGCGGCAAGTCTTCTTCAGAACGTATGGCAGCAAAGGCTTTAACCGAATTAAGTAAATCctcgaaaaattattttgctaaTTATAAACCCCTAAACGCTACTGCCGATAATTATGCTGAAGCAAGCACACATGCACCAGCAGTAGTTACTAAAGCGCTACATAAATCGAATATAAATGAAGTTGATGATATTTACAATACTGCATCTTGTTCTTCTAAAACTCCGCCCATAATGCGTAAAAAATTACGCGCGTTATCACCACCATTAGCGCCGCCTTTgccgccaccaccgccaccgTTACTGCAAACCATAATATCGGGTGAAACGAAAACCGCCAGTGTAGGTGTGAGTCCAGCAACAACGGATGAAATAATGTTGGAAAATCGTGCGACCACAGAGTATTATGCAAATGATAATACTACTCCAATGAGTTATGATGGTCTTATTTCGCCAAATACGATTGCaaatagtttaataaatttgaaaaatgaaaatttacaacaaaaactcgaAACGGCTGCTGTGCTTATGGATATTAGTAAAAAAGTGATCATATCACCACCATGCTCGAATCGTCAGTCTCCAAATCTACCTtcaatgcaaacaacaacaacagatgaaagtattattaaaaattctgtgATAAAAAATGAACGTCCATCAAatgaaaagacaacaacaacagcaacaactacagcaacaacggTAACAGCAACAGTTACAACAACCCAGCAAGATGGCAAGGAAATAGACTTATCAATTAAGAAAGCGAAACATGAATTCTCAAATACACAAccaattgcaacagcaacaaccacaacaacaactatatctCAATTATTACATTACACACGTCCTACAATACTCGaattgcaacagcagcaacaacaaaaacaacagcaacagcaacaacaacaaacacatatacaaccTGTAAATTTAGAATTAGAAACAACAAGTATTATAAAAGGAGGAATTGAAATTACAAATAGACCTTGTAGTAGTACCCAATTAACAACAATACCAATTAAAAAGGAAGCAACCAACGCATACACAGACTCTGATGAGAGTTCCGATTCGAATCGTTTGGAAATGGATATGAGTTCGATGTTGAATGAACGCAAAACACCGGATAGTATAACGTCAGAGGAGCAGGCAACAGATGTTGCGACCACACAATTGTGGCAGGCGCTGGCACGTTCAGCTGCAAATACCGAAAACAGTCAACTGCTCCGACATATGATACATCAATCACTTGTATTCCCTGCGCCGTCTGCTGCTATATCCGCTGAGAATGTACCTGAGGAACCAATGGCATTGTTGAAGAAtgataatatcaataaattatgcCGCCGAAAGCAAACCTGTCCGACGAAAAATGATACAATTGATCAACTGCCTAATATAATGGTTGCTAATGCGCAAAATCTCGAAATGAGTGCCAGTACACATAATCAAGTTGCAGTGGCGGCCGCGgctgcagcagctgctgctgcctCCATGCATGATAAGAAGAACAACAAGAATGCTAGCGCTAGTGCCAGCGCCAGTGCCAGTGCAGCCGGTATTATAAGCAATCCAAAGGATATGTCTTGCTCCAATTGTGGCACACTCACCACGACTATTTGGAGACGTAGCATTCGTGGTGAAATGGTATGCAATGCGTGTGGCCTATACTTTAAATTACATGGCATAAATAGGCCGCATTCGATGCGACGTGATACGATACACACACGTCGGAGACGTCCGAAGGAGTGTGAAAAGTCGAAGAAGAAAAATAAACGCTCAAGTTCACCATCTGATGTCTTGTGCAAAATACCGATTTGTGGTACGAGTGGCGCTGCAGTTGAGCTCAAGCAAAATGTGTTCTTAACAGTTGAAAATCCGGAACCATCTGGTTTTTCCTTTGCGaagTACAAGCGACACATAGACGAGGAGCGTGCGAATATCATAAAAGATGGATTGCTAAAGAAAAGGAAACTGCAACAAGGTACGATTAAAGGGGAATTCAATCAGATGGATGATTTTTTAGTACCTCTTAATCTTGTCTCCAGTGAAAATAATACTAAGTTAACATAA
Protein Sequence
MCNVPPKFFQVCRLCLTLVKEHDVEVLQIFNSSSSAAATATATTNDTFGSENEAKEITENTPNQQFHHYHKHPRHIQSLHYGRPQSSCSTKNDCSSDNLSLSPVPIYKSEEEIPDNKLSTFVPIVPSSIATTETSTYGIGQLMSKSLEKNEVGGFSITNPQIQVENATHVKRKITLSNDNEEGKSNDGISLGEEVFKKENHDDSSPHITIQILSCLSIKISPGDGLPAIVCSNCRTQLNAFWNFRLMAQKADFTLKELTKFSKHNSAEPDTRFAGHSKSPPCGKSSSERMAAKALTELSKSSKNYFANYKPLNATADNYAEASTHAPAVVTKALHKSNINEVDDIYNTASCSSKTPPIMRKKLRALSPPLAPPLPPPPPPLLQTIISGETKTASVGVSPATTDEIMLENRATTEYYANDNTTPMSYDGLISPNTIANSLINLKNENLQQKLETAAVLMDISKKVIISPPCSNRQSPNLPSMQTTTTDESIIKNSVIKNERPSNEKTTTTATTTATTVTATVTTTQQDGKEIDLSIKKAKHEFSNTQPIATATTTTTTISQLLHYTRPTILELQQQQQQKQQQQQQQQTHIQPVNLELETTSIIKGGIEITNRPCSSTQLTTIPIKKEATNAYTDSDESSDSNRLEMDMSSMLNERKTPDSITSEEQATDVATTQLWQALARSAANTENSQLLRHMIHQSLVFPAPSAAISAENVPEEPMALLKNDNINKLCRRKQTCPTKNDTIDQLPNIMVANAQNLEMSASTHNQVAVAAAAAAAAAASMHDKKNNKNASASASASASAAGIISNPKDMSCSNCGTLTTTIWRRSIRGEMVCNACGLYFKLHGINRPHSMRRDTIHTRRRRPKECEKSKKKNKRSSSPSDVLCKIPICGTSGAAVELKQNVFLTVENPEPSGFSFAKYKRHIDEERANIIKDGLLKKRKLQQGTIKGEFNQMDDFLVPLNLVSSENNTKLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00081799;
90% Identity
iTF_01563348;
80% Identity
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