Basic Information

Insect: Zeugodacus tau
Gene Symbol: grau
Assembly: GCA_031772095.1
Location: CM062650.1:15707193-15709201[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2 1.9e+02 3.4 0.9 6 23 282 299 274 299 0.95

2 9 0.0003 0.029 15.5 3.2 1 23 305 328 305 328 0.97

3 9 0.00085 0.084 14.0 4.1 1 23 336 359 336 359 0.97

4 9 0.057 5.6 8.3 0.2 1 23 364 387 364 387 0.85

5 9 0.00033 0.033 15.3 0.1 2 23 394 416 393 416 0.94

6 9 0.054 5.3 8.4 1.8 2 23 425 446 424 446 0.96

7 9 0.04 4 8.7 4.7 1 23 455 477 455 478 0.96

8 9 0.00061 0.061 14.5 0.3 1 23 483 505 483 505 0.97

9 9 0.0012 0.12 13.5 7.2 1 23 511 534 511 534 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2	1.9e+02	3.4	0.9	6	23	282	299	274	299	0.95
2	9	0.0003	0.029	15.5	3.2	1	23	305	328	305	328	0.97
3	9	0.00085	0.084	14.0	4.1	1	23	336	359	336	359	0.97
4	9	0.057	5.6	8.3	0.2	1	23	364	387	364	387	0.85
5	9	0.00033	0.033	15.3	0.1	2	23	394	416	393	416	0.94
6	9	0.054	5.3	8.4	1.8	2	23	425	446	424	446	0.96
7	9	0.04	4	8.7	4.7	1	23	455	477	455	478	0.96
8	9	0.00061	0.061	14.5	0.3	1	23	483	505	483	505	0.97
9	9	0.0012	0.12	13.5	7.2	1	23	511	534	511	534	0.94

Sequence Information

Coding Sequence: ATGATTTGCCGACTGTGCTTAATTGagtcaaatcaaattttaaaaatttataatgaaacaGGAAAAATGATAGATAATGACATACTGAAAATAGTgactaaacattttcaaattgagATTCGCTACGATGATGCAGTGTCCAATATAATATGTCTAGTATGTTGGGATTATATATCACAGTTTCATAAATATTGGTTGAGTATTGAGGAGAAACAGAAAACACTAAATGACCAATTATATTGTACACAAATAAAATGTGACATCGACGATGTGGAGCCCGAAGATTTGGCTTGTCAAGAGCAGATTTCAACATCGGAAAAAGTGGAGAGTGGTTTGTGTGAACCTGAAATAGATATGTTTCTTGAAAATGCGGGTAAATTTGGAGTTGAAACCGAATTTGTTGCTACAaaaatggaagaagaagaagatgaagtGACAGAAGATCGTGATGTTCTTGCTCCCATAACAGATTCAATTGACATTCTTTCAAGAGAAACTAACGTTGAACCTGAAGGTGTGCAATCCAATGTTAAACAGAAACGCAAATAcactaaaagaaataaaaagttgGAGAAGACCACTTTAGAAAAAGGAAAGAGTAAAAGAGGTCGACCGAGATTGAAAATAGGCAATACGAAAGCGAGTGCAAAAACTACCAAAGAAAAAACTTTAGAAAGTTCCAAAAATTATGCAGAAAAATTGAAAGCTATCCAAGAAGCTGACAAGTTCTTAGCAGAAAACACACAGttaaattgttgtatttgcatgGAAGAATTGAAAGATTTCAAGGAACTTAAAACTCATTTTCGACAAAAACATCAGTGCACGGGATATGTGATGTGTTGTGATCTTCGTTTTAATAAGCGTACTTTATATGTGGACCATATTCAATTTCATAAGAATCCCGACTTCTTCAAATGCTCTATTTGTAATAAACAACTGATAAGccgcaaaaattttataaaccatATGCATTCACTGCACCCAGCAGAAGAAAATCTACAATTTACGTGTAAACATTGTCCGAAAAAGTTTTCCAAACAATATATATTAGATAGTCACATAAAAATGCGTCATATGCCCAAAGACCATATATGTAAACTATGCAACAAAGCattTGCAAGTATCTGGATTTTGCAACAACATGAAAAAGCGGTGCATCGTAATGAATTTAAATCGGTGTGCGAAATATGTGGAAAACTTTTAAGGAATGCAGCAAATTTGCAATATCACATGGATAATATACACAGTACCGAACCACGTCCGGAAGTGGAATGTACACTTTGTCATAAATGGCTGAAAAGTGATCGCAGTTTGCGAAAGCATATGATATCACATCGAGATGAAGCATCTGGCGCAGTTTTTAAATGTCCGCAATGTGACGTTGAAAAAAAGTCAAGGCATTCGCTGTCATCACATATACGGTATCATCACTCTAATCGAATCTTCTCCTGCACAATGTGTACCAAAGAATTTAAAACTCCCATCGCAGTGAagGAACATGAAGCCACACACACCGGCGTCGATTTATATACTTGCCCCTTCTGCCCTAAGACATTCAGATCGCATGCTAATATGCATAAGCATAAATTGCACAGCCATTCGGATGAATGGGTACGCAAATACGCGCAGCCAAATGAATTCACTCAAAGTGTATTAAATCAAACGCGTAACACCGAGACATAA
Protein Sequence: MICRLCLIESNQILKIYNETGKMIDNDILKIVTKHFQIEIRYDDAVSNIICLVCWDYISQFHKYWLSIEEKQKTLNDQLYCTQIKCDIDDVEPEDLACQEQISTSEKVESGLCEPEIDMFLENAGKFGVETEFVATKMEEEEDEVTEDRDVLAPITDSIDILSRETNVEPEGVQSNVKQKRKYTKRNKKLEKTTLEKGKSKRGRPRLKIGNTKASAKTTKEKTLESSKNYAEKLKAIQEADKFLAENTQLNCCICMEELKDFKELKTHFRQKHQCTGYVMCCDLRFNKRTLYVDHIQFHKNPDFFKCSICNKQLISRKNFINHMHSLHPAEENLQFTCKHCPKKFSKQYILDSHIKMRHMPKDHICKLCNKAFASIWILQQHEKAVHRNEFKSVCEICGKLLRNAANLQYHMDNIHSTEPRPEVECTLCHKWLKSDRSLRKHMISHRDEASGAVFKCPQCDVEKKSRHSLSSHIRYHHSNRIFSCTMCTKEFKTPIAVKEHEATHTGVDLYTCPFCPKTFRSHANMHKHKLHSHSDEWVRKYAQPNEFTQSVLNQTRNTET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00191672;
90% Identity: iTF_01563251;
80% Identity: -