Basic Information

Insect: Zeugodacus tau
Gene Symbol: -
Assembly: GCA_031772095.1
Location: CM062653.1:21650320-21652205[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.029 2.9 9.2 6.0 1 23 124 147 124 147 0.97

2 10 0.02 2 9.7 0.2 1 23 155 178 155 178 0.97

3 10 0.13 13 7.2 5.4 1 23 241 264 241 264 0.96

4 10 0.00014 0.014 16.4 0.7 1 23 272 295 272 295 0.95

5 10 0.42 41 5.5 0.1 2 23 336 358 335 358 0.92

6 10 0.045 4.5 8.6 7.8 1 23 409 432 409 432 0.97

7 10 0.044 4.3 8.6 2.4 1 23 440 463 440 463 0.95

8 10 0.00051 0.051 14.7 0.2 3 23 522 543 521 543 0.95

9 10 0.012 1.2 10.4 0.2 2 20 550 568 549 570 0.94

10 10 6.3e-06 0.00062 20.7 0.3 3 23 580 603 578 603 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.029	2.9	9.2	6.0	1	23	124	147	124	147	0.97
2	10	0.02	2	9.7	0.2	1	23	155	178	155	178	0.97
3	10	0.13	13	7.2	5.4	1	23	241	264	241	264	0.96
4	10	0.00014	0.014	16.4	0.7	1	23	272	295	272	295	0.95
5	10	0.42	41	5.5	0.1	2	23	336	358	335	358	0.92
6	10	0.045	4.5	8.6	7.8	1	23	409	432	409	432	0.97
7	10	0.044	4.3	8.6	2.4	1	23	440	463	440	463	0.95
8	10	0.00051	0.051	14.7	0.2	3	23	522	543	521	543	0.95
9	10	0.012	1.2	10.4	0.2	2	20	550	568	549	570	0.94
10	10	6.3e-06	0.00062	20.7	0.3	3	23	580	603	578	603	0.90

Sequence Information

Coding Sequence: ATGAATTTCTTGAAAAGAATTGCAGCCAAAATGAAGACGTGCagtttgtgtaaaaataaatacgatGGTCTTTTTACACCCAATGAGCAGTTATTGGGCACGCGTATTTCCGAtgttatacaatttatatttagtgATAACCCATTGGATTTCCcaccaaaatttttgatatgtgCCGCGTGCGCTGCATCGCTTGTACAAACTGAAATTGTATTAAAGCGCCTGTCGAATGCGCTCCCGCAAAGCAGAAGTTCTGGAAAAGTAAACACATCACAGCAAAATGGAAATGATAGTGCCGATGAGACGCATAATACTACGCAGAATGAAAGTAGTAGCAAAGCAGCTGGAAATAATATGGACGAATGGATATTTCGTTGTACACATTGCGAGTATACTACcagaaaagcaaaaatgtataaaactcATTTGACTACTAAACATGAGTTGAGTAATCCGCGCATCTATCAGTGTATGTATTGTACGGAATCATATCAGCGCATAAATGGCATACAAAATCACATTGCTACCGCACATGAAAATAAACCACGTCAGAAACGTCAACGTCGTAAGACAATTGCTTTTGATTCGCCAAATGTATTGAGCAGCACAACAATCGATAAGGAACTGGATTTTAGCGCTGTAGtggttaatataaataataccaATGATACTAATCCAAATAATGAAAGTCATCAATTAGGTGGTAGTAATACTTATGAATTCTCATGTGGCCATtgtgaatataaaacaatacatccaaaatttttcaaaCGTCATTTATCAATTAAACATAATGATGAAGACTCAAGAATTTATAAGTGCAAGAAATGTCCTAGTACTTATGTACGACAATTTGCCTTGCAAAACCATATCGCTTATGAACATGAAAACAAACCTAAACCACAACGCCGCAAGTCGATCGCGTTAGAACAAAGTACAATAACCGAAGCTGAGTTGCTAATACCTAAAGAAGAAGTGGTAAATGATGAGGAAGATGATGAACTAAGATGTGAACTTTGTCTGTATCAAGCGCAAGATGCAAAGCAACTTAGAAACCATATGGTAATATTGCATCAAAATGATAGCATAAATCAAAATGAGTACAATACGGAAACCATACCAGATAGTCAACCAAAAGAACAAGTGGACCATGTATTCCAATCACCTTTTAAAAAACCACGCAATCAATTAAGTGCAAGTGAAATATCCTCATCGGACTGGGTTTTCCAATGCTCACATTGTGATTTTGAATGttcgaagaagaaaaaattcagaTCGCATTTAAATAATGAACATAATGTATATGATAACGATATATACAAGTGCCTTTATTGTACGTCAACATACGAACGTTATAGCGTGTTGCAGCATCATGTGTCCAATGTGCATAGTATTGATTTGACAGGCATCGAATCTGATTCCAGTCAAGATCACGTTGCaaagaaacaaaaacttaaTGGAACTGCCAATGGTGCAGAGAAACATGCACTTGATGAAGACAGCAGCAAGGAACAAACGCCGACTAAAAAACGTAAAATAGAACGTGAAAAAAGCAAAGAATCTTGTGTTGTATGTGGCAAGCTTTTTGCTACAGTGGATAAATTGCGTGCACATATGGACAAAAATCATGGCGGTGACGAAATCAAAAAGTGTCCCAATTGTGATGCACAATTCCGTTCGTTGGAGAAGTACGAGGCGCATCTTTTCAGTGAAAAATGTCTCAACACCAAATTAGCCTGTCAATATCCGGGCTGTCCGAAACGTTTTAATAGACCAtcgaaattacaacaacatatgcgTGAGAAACATCCCGATTTAATTGACTAA
Protein Sequence: MNFLKRIAAKMKTCSLCKNKYDGLFTPNEQLLGTRISDVIQFIFSDNPLDFPPKFLICAACAASLVQTEIVLKRLSNALPQSRSSGKVNTSQQNGNDSADETHNTTQNESSSKAAGNNMDEWIFRCTHCEYTTRKAKMYKTHLTTKHELSNPRIYQCMYCTESYQRINGIQNHIATAHENKPRQKRQRRKTIAFDSPNVLSSTTIDKELDFSAVVVNINNTNDTNPNNESHQLGGSNTYEFSCGHCEYKTIHPKFFKRHLSIKHNDEDSRIYKCKKCPSTYVRQFALQNHIAYEHENKPKPQRRKSIALEQSTITEAELLIPKEEVVNDEEDDELRCELCLYQAQDAKQLRNHMVILHQNDSINQNEYNTETIPDSQPKEQVDHVFQSPFKKPRNQLSASEISSSDWVFQCSHCDFECSKKKKFRSHLNNEHNVYDNDIYKCLYCTSTYERYSVLQHHVSNVHSIDLTGIESDSSQDHVAKKQKLNGTANGAEKHALDEDSSKEQTPTKKRKIEREKSKESCVVCGKLFATVDKLRAHMDKNHGGDEIKKCPNCDAQFRSLEKYEAHLFSEKCLNTKLACQYPGCPKRFNRPSKLQQHMREKHPDLID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01563231;
90% Identity: iTF_01563231;
80% Identity: -