Basic Information

Insect: Zeugodacus tau
Gene Symbol: grau
Assembly: GCA_031772095.1
Location: CM062652.1:25103601-25105455[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.81 80 4.6 7.3 1 23 233 256 233 256 0.97

2 10 3.1 3.1e+02 2.8 0.3 6 23 265 282 265 282 0.95

3 10 0.0042 0.41 11.8 2.4 1 23 288 311 288 311 0.96

4 10 0.00024 0.023 15.8 6.4 1 23 318 340 318 340 0.98

5 10 5.5e-06 0.00054 20.9 0.1 2 23 349 371 348 371 0.95

6 10 0.003 0.3 12.3 0.0 3 23 379 399 378 399 0.96

7 10 5.3e-05 0.0052 17.8 0.1 2 23 408 430 407 430 0.97

8 10 3.7 3.7e+02 2.6 0.4 2 23 439 461 438 461 0.75

9 10 3.6e-06 0.00036 21.5 2.2 1 23 467 489 467 489 0.97

10 10 0.00021 0.021 15.9 3.4 1 23 495 518 495 518 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.81	80	4.6	7.3	1	23	233	256	233	256	0.97
2	10	3.1	3.1e+02	2.8	0.3	6	23	265	282	265	282	0.95
3	10	0.0042	0.41	11.8	2.4	1	23	288	311	288	311	0.96
4	10	0.00024	0.023	15.8	6.4	1	23	318	340	318	340	0.98
5	10	5.5e-06	0.00054	20.9	0.1	2	23	349	371	348	371	0.95
6	10	0.003	0.3	12.3	0.0	3	23	379	399	378	399	0.96
7	10	5.3e-05	0.0052	17.8	0.1	2	23	408	430	407	430	0.97
8	10	3.7	3.7e+02	2.6	0.4	2	23	439	461	438	461	0.75
9	10	3.6e-06	0.00036	21.5	2.2	1	23	467	489	467	489	0.97
10	10	0.00021	0.021	15.9	3.4	1	23	495	518	495	518	0.98

Sequence Information

Coding Sequence: atgtttaatgagACATGCTGTTTACTATGCTTAGAAAGTTCAAAGGATCAAATAGATTTGGACTGCAAAGATGGATTCGGTTTGAATGGACGAGAAGTAATTGAATTGCATTTTAAGGAAGAGTTGGATATGATGactcaaattgaaataaaattaatttgtcgAAAATGTTGGGATTTAGTAGaaacatttcacaaattttatgaacaTGTCAAGCAAGTGCATAAAGAAGCGGCGAACACATTGAAAAGTGTCACTTTGGAAAAGAATAACTTTGAAATAAAAGATGAAATCATTCAGAATGATGACGCACAAATTGAACCCAAGCGTCGTAGGGGACGTCCTAGACGCCAAAAGGCGCCTGAAACTGTGGAAGTACTTTGTGAGCCTGCCATACCGCTTAAAGAATGTCAAGTTAAAATTGAAGAATTAATATTACCCCCCACAATTGATTCCAAAGATATCTATAATTCAACTGAGATTGTTTCTGAAGCATTAGATGTTAAAGATGAGTCTCTAACCGAAGACTTTATGGATAATTCTATATCAACCGACAGTTCAGACTCTGATGAAAAAGACAGTGAGGATGAAGATCAACCGTCACAAAGAAGGTCacgtaaaataaaaaacaaaagtaaaggcgtaaataaaaaaactgcggAATCGGATGAATATAttgcaaagaaaaattttaaatttacctGTTGCATATGTCAAATTCCATTAGAACATTTCAAACATTTGAAGAGTCATTTTCGTAAAGAGCATCAAACGAGTGGTTATGTGCTCTGTTGTGGTAAAAAATTACCAGAGCGTCGTTTATTAATTGATCATATTCATTTTCATGAAGATCCCGACTACTTCAAATGTAAACATTGCGGAAAGCGAATGTCGGAACAACGTAGCCTCGATCTGCATCTTCAGTATGCGCATGGCAATCGGGAACGAGTACATCGTTGTTCCATTTGTTCGAAAGGATTTTTCCGCGCCTCTTGCTTGAAACAGCATTATAATACGCATGTTACAGAAGATCAAAAAACAGTACCGTGCTTAGAGTGTGGTAAAACCTTCCCCGATGACGTTGAATTAAGAAAACACATGCGTCTAACACATTTGAAtgtttatgcaaaaatatgtGATATTTGCGGTATATCGATAAAGGGGCGCGATGCCCTCGAACGACATCAGGCCGAACATGCAGGAGTGCCacgaaaactaataaaatgtGATCTATGTGATGCTGCGCTCACTACGAAATATGGCTTAGCACGTCATATGAAAACTATGCACACTGAGGAGTATCAGACGCCGCAAGTTTGTCCGATCTGCTCTAAATTGTCACCATCTCTGCAGGCACATAATAaccacataaaatatatgcactCCTTACAAAGGAAACATGTGTGCAAACTATGCGACAAAGCTTTTAAACGGCTTACCGATTTCAAAGAGCACATGGCCACACATACCGGAGAAGCCCTATATACCTGTAGTTTTTGTCCACAAACTTTCAAATCGAATGCCAATATGTATTCTCATCGAAAGAAGAAACACGCTAAGGAGTGGGCAGAGCAGTGCGCGTTGAAAAAAAGCTTGGCGGTACCTTTAAAGAAGGCCATCGCAACTGaccaataa
Protein Sequence: MFNETCCLLCLESSKDQIDLDCKDGFGLNGREVIELHFKEELDMMTQIEIKLICRKCWDLVETFHKFYEHVKQVHKEAANTLKSVTLEKNNFEIKDEIIQNDDAQIEPKRRRGRPRRQKAPETVEVLCEPAIPLKECQVKIEELILPPTIDSKDIYNSTEIVSEALDVKDESLTEDFMDNSISTDSSDSDEKDSEDEDQPSQRRSRKIKNKSKGVNKKTAESDEYIAKKNFKFTCCICQIPLEHFKHLKSHFRKEHQTSGYVLCCGKKLPERRLLIDHIHFHEDPDYFKCKHCGKRMSEQRSLDLHLQYAHGNRERVHRCSICSKGFFRASCLKQHYNTHVTEDQKTVPCLECGKTFPDDVELRKHMRLTHLNVYAKICDICGISIKGRDALERHQAEHAGVPRKLIKCDLCDAALTTKYGLARHMKTMHTEEYQTPQVCPICSKLSPSLQAHNNHIKYMHSLQRKHVCKLCDKAFKRLTDFKEHMATHTGEALYTCSFCPQTFKSNANMYSHRKKKHAKEWAEQCALKKSLAVPLKKAIATDQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00190883;
90% Identity: iTF_01563188;
80% Identity: -