Basic Information

Insect: Zeugodacus tau
Gene Symbol: pita
Assembly: GCA_031772095.1
Location: CM062652.1:2547176-2549669[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.2 20 6.5 2.5 1 12 237 248 237 264 0.79

2 10 5.1e-06 0.0005 21.0 0.6 1 23 265 287 265 287 0.96

3 10 5.3e-07 5.3e-05 24.1 0.3 1 23 293 315 293 315 0.98

4 10 0.18 18 6.7 0.8 2 23 322 343 321 343 0.93

5 10 0.00013 0.013 16.6 0.4 1 23 349 371 349 371 0.95

6 10 1.4e-06 0.00014 22.8 2.0 1 23 377 399 377 399 0.94

7 10 0.00032 0.032 15.4 5.3 1 23 405 427 405 427 0.98

8 10 0.0027 0.26 12.5 0.6 1 23 434 456 434 456 0.96

9 10 0.015 1.5 10.1 0.0 2 23 462 483 461 483 0.96

10 10 6.1 6.1e+02 1.9 0.3 1 22 489 510 489 512 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.2	20	6.5	2.5	1	12	237	248	237	264	0.79
2	10	5.1e-06	0.0005	21.0	0.6	1	23	265	287	265	287	0.96
3	10	5.3e-07	5.3e-05	24.1	0.3	1	23	293	315	293	315	0.98
4	10	0.18	18	6.7	0.8	2	23	322	343	321	343	0.93
5	10	0.00013	0.013	16.6	0.4	1	23	349	371	349	371	0.95
6	10	1.4e-06	0.00014	22.8	2.0	1	23	377	399	377	399	0.94
7	10	0.00032	0.032	15.4	5.3	1	23	405	427	405	427	0.98
8	10	0.0027	0.26	12.5	0.6	1	23	434	456	434	456	0.96
9	10	0.015	1.5	10.1	0.0	2	23	462	483	461	483	0.96
10	10	6.1	6.1e+02	1.9	0.3	1	22	489	510	489	512	0.77

Sequence Information

Coding Sequence: atgtgtaaaaagGCGGAAAATCAGTTGAGTCAAGTTCCACTTTTGGGCGAATGGCCTTCTCCCCTAGTGAAACCAATAATCCCGCCAGAACTTTTACCGAAGCAAATTGCTACGCctaaggaaaataaaaatccCATCCAACAAACGAAGTTACCTTCCTCTGCCAGTAAGGGGCAATCTCAACAGTCATCACAGTCGCAACAAAGTGCTGCAGCTATTTCGAAAGTATCAAATGTTAAACAATTGAGTTCGTCAGTATCAACTCCCAGGAAAATTCTTAACTCAAATCCAGCACCACTTCCTGAACCACCAGTACCAGCTCGTacgaaaaagaataaaaatgtaGAAACATTTAGTTTTCTAACAAAGGTAGAAAACAATGAAGAGATTTCACTTGACGATGTACAACGATTAATTGCTGCAGAAGATGGTGAGTTTATTAAACAGGATTTTCAAGATTCTACGGTCTCTCCAACGAGTACTTCTACAAACATAACAAAGAAGAAACCTAAACTTCTAAACAAATCCTCAATGCGTATACTTAATAAGGAAGCTGAAGTAGATACAGAACCAAGGTTAAAGCTGCCGCAAGTAAAACACGACGAGGACGGtaacgtttttgttgttaccGAAATATTGGACCCTAGTAAGCCATATGAGACCGAAGCAGACCCTATTAAGAATGCAGCACCAGTAAAGACAAATGTTTTTCCGTGTCCATACTGCGACCGTACATTCCCTCTGTTGCAATTGCGTGACATTCATTTAGTGAATCATACACGTGAACGACATTATCCATGCGGAGACTGCGACCGTTCGTTTTTCTCTAAATATGATCTTCAGAAGCATACAGTTATACATACTGGTGAACGAAAGTACAAGTGCACCGTTTGCGATAGAGGATTCACGAGACCGGCACTTCTGCAAAGGCATGAGAAAATACACACAGATATACCCAAGTTTCTTTGCGTATTTTGTGAGAAAGAATTCTTGTCGAAGGACGATATGGAAAAGCACACTGATCGGCATCGCAAAAATCGACCTTTTAAGTGCAAAGTGTGCTCTAAAGCATTTGCTTTCAAGCAAGGCCTGGAACGTCATGAGGTGGTGCATTCGAGGGAACAGCCCTATCCTTGCCAATATTGTGACAAAAGTTTCTGCACACAATCGAAATTGGCTCGTCACCTGGTAGCACATGCGGGCAGTCGACCTTTTCCGTGCAAATATTGTCCGAAGTCCTATTTACTTTCCCATCACTTGTCGCGTCACATGCGTACCCACAAGGAAAGTGTTGATATGTACTCATGTAACGAATGTGAAGAGGTTTATAGGACTTGCAACGAGCTTGTTATGCATTCAATAGTGCATGCTAAAGAAACATTGGTATGCCCGCTATGTCAACAAGGCTTCGAGGATGAAGCGTTGGTGACATCACACATTATGGAGCACGCTAATAATGAGTCGTTCCCTTGTGAATTCTGCGATTTGATATTCCTTACATATAACGAACAAAACTACCACGTTAAAGCCGCACACGCCTCGGAACTTGCCGCATATAATGAAGacgaaaagaaaacaaagcgcACAGAGAAAATTGTTAGTGATGAAGAATTGGAAGGTACTATTGAGGAGTTTCTTTATGATGAAGAAAATGATTCGGACGCTAACGCTAATACAAATCAAAGTACAGGCGGAAATGATGAAAACAAAAAGTCTAACACTGAAGAAGACGAACAGTACGAGACAGAATATCTAAAGATAGAAGAACTGGTTAGCACTGTcgaagaaatgactgcagaagtCTTATCTGAGATAAACGAAGATCAAGAACCGgtcataaaaaaaagtaaacttaGCATTAATAACGAAAAGGAACAAACTATCGTAAATGAAGTCAAACAATTGCGCCGTAAGGCTCCCAAAAGAGATACTCAGAATATTGACGGAGGCACATCTTTAAAAGCTCCTACAAGGGTTATTGCCAATCAGAGTTTAGTGCTGAGAAGAGGTAAACCTAGCGCAGTTACCTCGACCACAAATCAGAAGAATGGACaaggcaataataataacaaaaatgatACCCCTACGTCTAGCAAAGACACAAAAGGTTTGGAAAATGTCAATCAACGTAAAGTGATAACAGTGTCGGGAAGTAAGCAAATTAGTTCAAAAGCTGTAATACCTAAAAAAGGTGTAGTGCAAACAAATCTCGATAATATAGTTATTAGAACGAAGCCAGGTGAAAAAAGTGTACGCGTGCAAAAAATTCTTGTAACAAAAGCCGAAGCAGCTGCCATGGCTAAAGATGGTCGACTACGTATCAAAGAcggaaattttatacaaatcaaGGATGCAAATCTACCAAAGTCGTCGAAATAA
Protein Sequence: MCKKAENQLSQVPLLGEWPSPLVKPIIPPELLPKQIATPKENKNPIQQTKLPSSASKGQSQQSSQSQQSAAAISKVSNVKQLSSSVSTPRKILNSNPAPLPEPPVPARTKKNKNVETFSFLTKVENNEEISLDDVQRLIAAEDGEFIKQDFQDSTVSPTSTSTNITKKKPKLLNKSSMRILNKEAEVDTEPRLKLPQVKHDEDGNVFVVTEILDPSKPYETEADPIKNAAPVKTNVFPCPYCDRTFPLLQLRDIHLVNHTRERHYPCGDCDRSFFSKYDLQKHTVIHTGERKYKCTVCDRGFTRPALLQRHEKIHTDIPKFLCVFCEKEFLSKDDMEKHTDRHRKNRPFKCKVCSKAFAFKQGLERHEVVHSREQPYPCQYCDKSFCTQSKLARHLVAHAGSRPFPCKYCPKSYLLSHHLSRHMRTHKESVDMYSCNECEEVYRTCNELVMHSIVHAKETLVCPLCQQGFEDEALVTSHIMEHANNESFPCEFCDLIFLTYNEQNYHVKAAHASELAAYNEDEKKTKRTEKIVSDEELEGTIEEFLYDEENDSDANANTNQSTGGNDENKKSNTEEDEQYETEYLKIEELVSTVEEMTAEVLSEINEDQEPVIKKSKLSINNEKEQTIVNEVKQLRRKAPKRDTQNIDGGTSLKAPTRVIANQSLVLRRGKPSAVTSTTNQKNGQGNNNNKNDTPTSSKDTKGLENVNQRKVITVSGSKQISSKAVIPKKGVVQTNLDNIVIRTKPGEKSVRVQKILVTKAEAAAMAKDGRLRIKDGNFIQIKDANLPKSSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01563126;
90% Identity: iTF_01563126;
80% Identity: -