Ztau020444.1
Basic Information
- Insect
- Zeugodacus tau
- Gene Symbol
- -
- Assembly
- GCA_031772095.1
- Location
- CM062652.1:62723407-62724225[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-08 8.1e-05 22.9 0.0 1 41 15 56 15 59 0.91 2 2 2 1.9e+03 -0.7 0.2 14 24 120 130 115 131 0.78
Sequence Information
- Coding Sequence
- atgccaaatatatataaaaagaagtttcCCAACAAAACAATTGAtgaggaaaatatgaaaaaagcatTGGaggatataaaaagaaaaaaggaaacaaCAGCAAGCGCTGCCCGCAAATATGGATTAAAGCGCACAACACTTATATCGAGACTATTAAAGGAGCAAACGAATGTGGGAGTTGTGAAGGATTATCAGTCTAAATACTCGTCGAACCAAGTTCTTACAGCTGCGCAAGAAAGAGATTTAAcggtatatttcaaaaaaacttCTAGTCTTCATCACGGGTTAACGTATGACTTGGCTAGACATGAGACTGGAATAAGTACTGTTTTGGATTCTCCTAAAGTTATAGCTGAAAAAGGAAAGCGAACCGTATCGCAAGCCGCATCTGCAGAGCGGGGAAGTTTAGTAACTATGGTAGGGATTGTTAACGGATCTGGTAACCATATTCCACCGATTTACGTTTTCCCTCGTAAGCGCATGAATCCTAATTTTCTAAAGGGATGA
- Protein Sequence
- MPNIYKKKFPNKTIDEENMKKALEDIKRKKETTASAARKYGLKRTTLISRLLKEQTNVGVVKDYQSKYSSNQVLTAAQERDLTVYFKKTSSLHHGLTYDLARHETGISTVLDSPKVIAEKGKRTVSQAASAERGSLVTMVGIVNGSGNHIPPIYVFPRKRMNPNFLKG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -