Basic Information

Gene Symbol
Arid4b
Assembly
GCA_031772095.1
Location
CM062650.1:68475275-68477216[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-29 6.5e-26 91.2 0.1 1 88 297 382 297 383 0.95

Sequence Information

Coding Sequence
ATGCAACAAGTGGATACAGATCCACCATCCCTACCGGTTGGTACGGAGGTAAGTGCCAAATACAAAGGAGCCTTTTGCGAAGCTAAAGTTAGCAAAGTGGTTcgtaatataaaagtaaaagtggCTTATAAGCAAGGACTAGGATCAGGAACTGTGTCAGACGACTTGATAAAAGTTGCGCCTGGGCATTTGCGCGTTGGTGCTACTGTTGAAGTTCGTCATCCCGATCGTAAAGAATTGGTAGAGTGCACAGTAACTAAAATTCAAGATTGCTCGCAATATACTGTCGTTTTTGATGATGGGGACATAACAACATTACGTCGCACGGCTTTATGCCTCAAAAGTGGCCGTCATTTTAATGAAAGTGAAACCTTGGACCAGCTACCATTAACTCATCCGGAGCATTTTGGAAATCCTGTTGTAGGAGGTCGTCGAGGGCGAAGACGTGGACCTATGAACGATGATAGTTCCGATGAAGAAGATGAAAGTGATGCGAAAGAAGTTGTTAACGAAAAGGAAGAACATATAGGAAATGTTGTATGTGTGGAAATGGAAACAAAGAAGAAGGATAAAGAGAAATGGTTTCCAGGGCTTATATTAGCTCCTACAGCACAGgcAAATGTGCGAATCCGGGTGAAAGATGAATATCTGGTAAGGTCATTTAAAGATGGTCGATATTATACGGTTCCAAAGAAAGAAACAACTGAATTTACTCGTGAAGCGGCAGCTAAACAAGACGGTCAAGCAGTACAAGCGGCACTTCAATATTTAGACAGTGGAGCACTGCCTCCACATTGGGATCGCGAATCTTTGTTTGGACTTAATAATTCATCTAGTGAAGGAGATGGTGAACTGGAATCCGACTCGTCAGATGATGAACCACGAGAAGAAAAGGATCGTTTTGTGGCccaattgtataaatatatggatGATCGTGGAACACCTTTAAATAAAGTACCATCAATTCAAAACCGTGATGTTGATTTATATCGTCTATTTCGAGCAGTACAGAAATGTGGAGGTTACAACCGCGTTACTGCAAAAAATCAGTGGAAATCAATAGCAGTACGATTAGGTTTCACATCAGTAACAATTAGTGTAACAAATCTGGTTAAACAAGcgtataaaaaatttcttcaaccCTATGGTGAATTTCATCGTAAACTTGGATGTTCAATGCTAATGACGCCTCGTAATTCTAGTCGAAGTAAAGGTCGTAGTTTAGTTCGAGCTAACTCCGTTGCTTCTCCAAAACCAATTGACAGTACTAAAGATTCATTGAACAAATCTGCAAATAATACTATAACAGCATCATCATCTTCATCATCGTCATCCGCCTCCAGCAGCCAAAATATTGCTGCATCGTCGGTTGTTGCAATAACACCTGCCAATATAATCACGGTAACACCTACTGTAACGGAGGAATCTGAAAATACAAGCGAATCCAGTGTAGATAATgccaagaataaaaaaaaaactgtagtGGGTAAAGTTAAAGGTCTTGTTGAAAAGTATGAAGAGAAATCGAAGGATGATTGCGATGTGCcgctttcaaaaatcaaaacgtTGCAAGATACACCGCGATGTGAGGACAAAGATAAAGCAGCATGTCTAAAGGATGTTCCTGCTACTCCAACTTTACAAATAAGAGATTCTTCTCCTCCAGGTATGTGA
Protein Sequence
MQQVDTDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGTVSDDLIKVAPGHLRVGATVEVRHPDRKELVECTVTKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGPMNDDSSDEEDESDAKEVVNEKEEHIGNVVCVEMETKKKDKEKWFPGLILAPTAQANVRIRVKDEYLVRSFKDGRYYTVPKKETTEFTREAAAKQDGQAVQAALQYLDSGALPPHWDRESLFGLNNSSSEGDGELESDSSDDEPREEKDRFVAQLYKYMDDRGTPLNKVPSIQNRDVDLYRLFRAVQKCGGYNRVTAKNQWKSIAVRLGFTSVTISVTNLVKQAYKKFLQPYGEFHRKLGCSMLMTPRNSSRSKGRSLVRANSVASPKPIDSTKDSLNKSANNTITASSSSSSSSASSSQNIAASSVVAITPANIITVTPTVTEESENTSESSVDNAKNKKKTVVGKVKGLVEKYEEKSKDDCDVPLSKIKTLQDTPRCEDKDKAACLKDVPATPTLQIRDSSPPGM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00081926;
80% Identity
-