Basic Information

Insect: Zeugodacus cucurbitae
Gene Symbol: -
Assembly: GCA_028554725.2
Location: CM053019.1:51057768-51065034[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.068 9 8.0 1.6 1 23 1756 1779 1756 1779 0.95

2 13 0.25 33 6.2 1.1 1 23 1970 1992 1970 1992 0.96

3 13 0.00026 0.034 15.7 2.5 2 23 1995 2016 1995 2016 0.97

4 13 2.5e-05 0.0033 18.8 0.2 3 23 2024 2044 2022 2044 0.98

5 13 4e-06 0.00053 21.3 3.7 2 23 2051 2072 2050 2072 0.97

6 13 7.6 1e+03 1.6 0.4 5 23 2085 2103 2083 2103 0.96

7 13 1.9 2.5e+02 3.5 5.4 3 23 2110 2131 2108 2131 0.93

8 13 0.021 2.8 9.6 0.2 2 23 2142 2162 2141 2162 0.96

9 13 0.0002 0.027 16.0 0.8 1 19 2168 2186 2168 2190 0.93

10 13 8e-06 0.0011 20.4 1.2 1 23 2198 2220 2198 2220 0.98

11 13 0.00014 0.019 16.4 7.6 1 23 2226 2248 2226 2249 0.96

12 13 0.0013 0.18 13.4 6.5 1 23 2254 2276 2254 2276 0.98

13 13 0.0024 0.31 12.6 6.0 1 23 2282 2304 2282 2305 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.068	9	8.0	1.6	1	23	1756	1779	1756	1779	0.95
2	13	0.25	33	6.2	1.1	1	23	1970	1992	1970	1992	0.96
3	13	0.00026	0.034	15.7	2.5	2	23	1995	2016	1995	2016	0.97
4	13	2.5e-05	0.0033	18.8	0.2	3	23	2024	2044	2022	2044	0.98
5	13	4e-06	0.00053	21.3	3.7	2	23	2051	2072	2050	2072	0.97
6	13	7.6	1e+03	1.6	0.4	5	23	2085	2103	2083	2103	0.96
7	13	1.9	2.5e+02	3.5	5.4	3	23	2110	2131	2108	2131	0.93
8	13	0.021	2.8	9.6	0.2	2	23	2142	2162	2141	2162	0.96
9	13	0.0002	0.027	16.0	0.8	1	19	2168	2186	2168	2190	0.93
10	13	8e-06	0.0011	20.4	1.2	1	23	2198	2220	2198	2220	0.98
11	13	0.00014	0.019	16.4	7.6	1	23	2226	2248	2226	2249	0.96
12	13	0.0013	0.18	13.4	6.5	1	23	2254	2276	2254	2276	0.98
13	13	0.0024	0.31	12.6	6.0	1	23	2282	2304	2282	2305	0.96

Sequence Information

Coding Sequence: atggGGGAAAACGTACAGTGTCCGGTATGCACACTATTCCTGCATGCGGGCATGAATCTCTCAGATCATTTAGAGACACATCCTAAAGAGCAAGTCATTAAGGCACTTGTGCAAATGACAATTTCGGGGAGTGGTGGCAGTGCTGCGAGCTCCGCACTGGCGGCCTCCTTAAGTGGCGGTAGCACACCCAAAACTGATCCGGATGAAAACCCAAATCCCGCACCGATATCGTCGTCGATATCTGATTCTGATGCCACCAGCAATTCGGCGACGAGCGGTACATCTAATTATGCCGCTTCTGACACAACCCAAATTAGTAGTCAGAGTTTTGCAAATGCATTTTGTGGCATATCTGCAATAAATAAATCGTCGTCGTCAAATGCAAGCGCTGCTGCAACAACATCGGCTTTAAGGTCACCAGTTGACGCAACGGTAAACACAAACAATAAGAATCTAGATGATAAACGGGAAATTAAAATTGATGCAGGTAGTGGAAGCGATAAAGTTCAAGGTTCCGTGGCAACGGTAGTGCCTGCTAACGGTATTGCACAAGTTCAGCTACCTAGTCAATTTGATGATTATGCGGCTAATAGATACCaccaaatgcaacaaaaacaattagcaACAAGTCAATTAGAGCAGcgacaccagcaacaacaacagcaaaagaatcaattgcaaaaacaaaaacagcactTGGATGGTGCAAGTGGCCACATTGAAATCGCACAACAGCGCAATATTTTGCCACCACCGCCCCCACCAATGGTGTCAATGCCACTAGTGGTCGGTCAAGTGCCAAACAAACTCTTACATCAatcacatacaaacaatttatttgcaagCAATGTTGCCCCACATCGTCACATACAAATGCATCCGATCCAGCAGCCGCATCAACAGCTCCAACATCAgtatcaacaacagcaacaagcgcataatcaacaacaacaacagcaacagaacctcaaaatatattattcaaatGCTTTGCCAACACCACCGCCTGCGCTACAGctaTTTCCATTCCACCATGCATCAACACAATTGCAACATCAGAAACCACCGCCTGCTTATGGCACAGCGATAAGTCAAATTCGATCTCAAaataaccaaaacaaaaataagcatGCCACTGCAgacaaaaatcacatacaacaacaccagcaattacaacaacaaccgcaccAGCAACCACAGCATCATCAGCAGTTAGCGCGTCAGATGCAGCAGCGTGCCACAATGCAACCCACACAATCACAGACATCAACGAACTGCACGCCATCATTGCATctgcaccaacagcaacaacaacacgcattgGCAAATATGCCAACAGTAAGCGCGAAACCTACCAGCGGCGCAAAACCAAATGAATTGctaccaccaccgccaccacgcACACCAACAACCAACATGCAACAGCTTCATCAACCACAATTGCCACATTCGGTGTCACATTTTGGCGCTCCGGTCAAAACTATGCCAGCCGCACAGCAACGTGTTCCAACAGATTGCAGCGACACCAGCGCCACAGCAACAAGTCAAACACTTTCTTCATCAACGGCTGTGACTGCTTCGGCAACGGCAACGGCCACGACACCAGCCATTGCCACCATGACATCATCACCTGGCATACGACAAATATCGTCTCCATACAATTCATTGCTTATGACAGCGGCGCAATCTCCTTCCTCATCTTCAGTATTACGCTACGCTGAGTCACCGGTGGCGCACTATTTGGAACGAGATAACGGTGATTTTATAGTGCAAGAAACACCGAAACACATTGTGGAATGCGTTGAGAAGGACAATGGTGAATTTTCGGTAATTGAGCGTATATATCAGTCGCCGTTAAGCGTTTTGCATATACACGAAGATAATGAGAAAGAAGACGATGATGATGCAGATGATGATGATAACAGTGATATTAAAGACAACGATAACAAGAAGGTTTCACCAACCGATGATACTACAAAAGCAAATGAAGTTGTACCAATGGATATTGAATCCGGAGAAAATCCGTCAGATGAGCAATTacggaaaaatacaaaatctgaAGTGGATACGGAGGCGCAAGAAAATGAAGCAGAATTAAGTAGCAATAAGAGCACTGCATCAGTTGATGGAAAGGTAcaatcaaaaatattcggtaGTGATAGAGCAGAAATGACAAGCACCAGTTGCAGCAGCGATAGATCAACACCTCTGCATTGTGCAAATACGAGTTCTGCCCAAGTAGATGTGAGCAGCGAGACCAGTACATCATCGAATTCGAGTGCAAATATTAATAACGAATCGAATGTGATGCCCAGCTGTTCCACAACAAATTCCAACCAAACTCATAGTTCGTCAGGGTCATCGCGGAAACGTAGTTCGAAAAACACGATTACTGTGCTGAGTGATGTGCAGCTAAATTTAGACGAATACCTCGATTTGGTCGGTAATATAATAGCGTCTAGTAAAATAACAGCGAAAAGTAATGCATTACCGGGCACCATGCCCATTCCTTTGCTGAAAGTCGAAAAAGAGGAGCCGCCCGATGATGACTACGAATCGCAGACGCCACAACAAGATCAACAAAAGTACGCTGAACGAAAACAAGAGTATTTCGAAATACAAAAACCGCTTAACGATTTCCAAGCACCAACCGTAATTGAACCACCTACAATCGCCAACAAAAATGAGActgaaaaaatagttgaaaataattGTAGTAGCAATAAGGTTAGAATAAATGACAGTAGTGACAATGTAAAAACAGCTGACAATGCCgtcatgccaacaacaacatcggCCACTGGTACGCCGACATGCGCAAGTCACGTGACCAGTGTTATACGCATGGCAACAACTAGTCAACAACAGCAGACTCAAAAGGATTTGGTGCTACAACCAACAGCTGCTTCAGATGCAACGGAACCACAATCACAACATATGTTTGATGACAAGGCTGCATTGGCAGCGCAACCACAAGTAACATCAATAATTATACAAGATCTATCGCGCCAACATATTATACAACTTCAAGATGAGCATCACGCGCATAGAAATCAACAGCAGCCACATCATGCCATGGAAGACCCTAATGGCTTGTTGCAGCAGCAAGTGGATCCTCCGAATTCCAAAGCAGAGGGGCAACCACTGTTGCACACACGAGCACCAACCTCAACCACACTGCCAGTGCAGAAAAGAGGCCCAAAGAAGCTGATTATCAAGCCAAAAGCAACAAAGACTGATGCAAATGCTAacctcaacagcaacaacacgaaTTCCCATTCCCACAGGAATGCGAATGTTAAGGATATAAATAGTCAAATAATCATTGAAGAAGCACTATGCGAACTACCGACAACTTCGACAAAAGCACAAATGGAAATGCAAGAAAAAATGCGGCAATCACAGCAAGAGCAAGAGCAACCAACGCATCATACAATCGCACAGAAATTGATCAAAAGTGAACCGAGTTCTTCAGGGTACGACAGCAATACCAATAGAATCAGCATTAATGGCAACAATTCGGGACACAGCATACTTGAGAATCACCTAACCTCAAATATGGATAATAATTGTGGGCCCATTATACAATGTAAGACCGAACAAGTGGGGAGCGCGCAGGAAGCGCAAACAAACTTCTTGCAACCTTTCAAGGAGGAAGATAAAGACGTCAGCAACTCCAACGATAATGCTGCTGCGACTGATGATGCACGCGTTTTGTTGGATTTCGCAAATTCAAAGAAACACGAAGCTACACATAACGTCGCGACTAATTTTCTCTCTGCCACTTCGATCTTCTCAAACTCAGCAGGTAAAGTGAATGAGCCAAAGTCAGCTACGATACTCCCTAATACCAATACAAGCAGTACGGAGTCACATGCCGCCTTGCGTTGCGAAGACGAATTTATAGCGCATGATGATGTGCAAGAAGTAGTCATTTCGTCGTCATATTCTCAATCGCAATCAGCTTCAGATGTACCCACAAGTGCTACCAGTAGCACCACCACTTCCCACGTCAGGGATTTAAATGTTGCGTTgcagcatcagcaacaacaacagcatcatcatcatcaacagctgcaacaacaacaacagcagcaacaacagctgcaGCACAACTTCACCGATTATCCATTCAGTTTTCTTTACGGTCATGGTGGGAGCGTCAGTGGCGCCCCAGCCGATACGAAAGGCGGTAATTTCTCAGCCATCTATCAGCAGGCGGCACAAGATGCTACTACAGCAGCAACACTTGCCTCTGGCAGCAATACTATACACACAGATGATTCTACCAGTtccacgcaacaacaacaagcacatacCAGTCACTTTGGCGGCGTACATGGTGGTAGCGGTGAAATGGGCAGCACTGCATCGCATTGGTATCACCATGCGTTGGCCACAGCAAATGCTGACTTCGAAGCGGCGCTGGGTGTCGATTGCAATGCAGCGGTCGACGGCGGTGATGTGGGTAAATACTTGGATCTCGATTCTTGCAAGCGTGAGGTTTTGGTTGGTATGCCAGGTGCACCGTCTTCAACTTCATCATCGTTTGCTGCTGCCACGGAGAGCAGTTTGGCTGGCGGTTGCACGGCTGACGCCCTGAATATACGCACTGATGAAAAGATGCCAGCCAAGGGCGAGATTTCTGGACAGGAAAGCAACTGCGACATAGAAAACTCGTGGAGTCAGCCGatGTATGGCGAGATTTCTGCACGATTTTTCAAAACTACCTTTCCCGGCATATTCCAGCATGAGAATGGTTGGAATCATGACGAGTATTTCACTGTACAGGATTTGAGCGCCTCAGCTGCGCCCACTGGTGCGGCACCCTCTAACCGCCCAGGCAAAAGCTTCGATTTTCGTCTTCCTTTGGAAGCAACTACCTCAGCTGCAGCAAATGCCACCGGCAGCGGCAATAGTAATTTTCAGCTATTCGCACGACACACGGATGCCCTGCCATCCACATCAACATCCAATAAAAAGAAACGAAAGCGTGACACTcatgttggtggtggtggtggtggtagcaGTGGTGCTGGCAGAGTTGAAAAGGCGACTGTCTCACGTGTACAACCAACCGCCACAATTACATCACAACAGTTATTATTCCCCCAGCCACAGAATAGTCAACAGCTGCAGGCGCATGAACAGTTACAACCATCAAGTCAAAACGCTGAATCTGCAACTTCATCAACAGCCGCCGCTGCAGGCGCCAACGGCACGCCCACCTTGGGTGCAGATCAAAGGCGGCCGCGCAAGAAAGTCTATCAGTGTACACATTGCACAGCGGAGTTCCCCAAACTGAAGGATCGCAATTCACATATGATACTCCAGCACAACTATGTGCGTCAGAATCGCCGATTGATATGTGTTCAACGCCCGGATGCAGCTGCCAGTGCGGCCGCACCTGATGCCCTTCCCTCATCATCCAATGCCGTTGCTGGCGGCGTGGACAATGTCGTAGTCGTAAATATGGCTGAGGGGTGTAGTAGTTCACTTGTACGTTCCGATAGCATGGAATTTCTGGAAGACTCCAAACAGGACATCGTCAAAATTGAGGTAGAAAATGCGTACCAGCCATTAGCTGCCTCGGCTGCGGTTGTGGCAACAGCTGCGTCTACGTCCACAGCAGGCAGCGGTGAGAGCATCGACGCCAAGCCAGAGCTGGTGGATGACAAGAAAAGTATGGCATTATTGCCAGCGAGCAGTCTAAATATAGGCGGCGGCGTTGGTGATATCGCCGGCGAGGCATTGGATACAAAGCCGCTATTACAACCATTGGCAATGACCACACCAGCCACTAAATTGGCGGCGCTTTATCGCATGTTGGTTTCCTATAACATCTCGACACTGAAAGATAGCCATAACCTAAGTGAAATGGAACAGAAACTCATTGAGCAATCGATCTTCTTCTGTTACGTGTGCCGACGCAATTTCTCTTCGGTCAAATTATACGATGCACATCTGAACGAGCATCCCGCCGAATGTTTTACGTGTGGCAAAACGTTTCAGCGTTGGAAGAATTTCTCACTACATTTGAAACGCCACTTGGGCTGGAAGGAGTTTGGTTGTAATGTGTGTGACAAGAAGTTTGTGGTGCGTAGCGCATTGGTGGAGCACATGCGCATGCACACCGGACACACGCCGCTCAAGTGCAAAGTGTGCGGCAAATACTTCAAGCGTTACTCGAATTTGACACAGCATCGCAAGCGGCACGGCAAGCAAATCATCCGGAAGAAGGAGTACGTTTGCCATTGCGGCGAGGTGTTGCCATCAAAGGCGCGTTTCCTCTGGCACAAGGAGACACACGATGCCAAGCCGAAATGTTGTCCATACTGTTGTGATCGCTTTGTGCATGCGAACTCCTTGCGCCGGCACATACGTTTAGCGCACTCCGACAAGTTTGATTACGCCGAGCCGATGGAGTGTCCACTGTGCAAGCAAACCTTTGCCAAGTCCTCCATTAAGGCACACATGGCCACACACTCGATGGACACACAACACGACTGTGCTATCTGCAATAAGTCCTTCTCCACCAAATGGAATTTGAAGATACACTCGTGGGTGCATGCCAATCGCACATCGAAACCATTCAAATGTGAACactgccccaaagcgtttgtgCGCGAGGTGGACTTCAAGAATCACATGAATGCACACAAACAAATCAAGCCGTACACGTGCGAGTATTGCGGTTGCAAATTCATAAGGAAATACAATTACATGCGACATCGACGCGAGCATCACGGCAATAAGAAGTTCACCTGTGACCTGTGCAAAAAGTCCTTCCATCGGCATTACTATCTCATCGAACATCGACGCATACATACAGGCGAACGGCCATTTCAGTGCACCATATGCGGCAAGAGTTCCACAACGAAGACCAATCACAACAAACACTTAAAAATACATCATTCGCGTGATCCATTCACCGTTGAGGCGTAA
Protein Sequence: MGENVQCPVCTLFLHAGMNLSDHLETHPKEQVIKALVQMTISGSGGSAASSALAASLSGGSTPKTDPDENPNPAPISSSISDSDATSNSATSGTSNYAASDTTQISSQSFANAFCGISAINKSSSSNASAAATTSALRSPVDATVNTNNKNLDDKREIKIDAGSGSDKVQGSVATVVPANGIAQVQLPSQFDDYAANRYHQMQQKQLATSQLEQRHQQQQQQKNQLQKQKQHLDGASGHIEIAQQRNILPPPPPPMVSMPLVVGQVPNKLLHQSHTNNLFASNVAPHRHIQMHPIQQPHQQLQHQYQQQQQAHNQQQQQQQNLKIYYSNALPTPPPALQLFPFHHASTQLQHQKPPPAYGTAISQIRSQNNQNKNKHATADKNHIQQHQQLQQQPHQQPQHHQQLARQMQQRATMQPTQSQTSTNCTPSLHLHQQQQQHALANMPTVSAKPTSGAKPNELLPPPPPRTPTTNMQQLHQPQLPHSVSHFGAPVKTMPAAQQRVPTDCSDTSATATSQTLSSSTAVTASATATATTPAIATMTSSPGIRQISSPYNSLLMTAAQSPSSSSVLRYAESPVAHYLERDNGDFIVQETPKHIVECVEKDNGEFSVIERIYQSPLSVLHIHEDNEKEDDDDADDDDNSDIKDNDNKKVSPTDDTTKANEVVPMDIESGENPSDEQLRKNTKSEVDTEAQENEAELSSNKSTASVDGKVQSKIFGSDRAEMTSTSCSSDRSTPLHCANTSSAQVDVSSETSTSSNSSANINNESNVMPSCSTTNSNQTHSSSGSSRKRSSKNTITVLSDVQLNLDEYLDLVGNIIASSKITAKSNALPGTMPIPLLKVEKEEPPDDDYESQTPQQDQQKYAERKQEYFEIQKPLNDFQAPTVIEPPTIANKNETEKIVENNCSSNKVRINDSSDNVKTADNAVMPTTTSATGTPTCASHVTSVIRMATTSQQQQTQKDLVLQPTAASDATEPQSQHMFDDKAALAAQPQVTSIIIQDLSRQHIIQLQDEHHAHRNQQQPHHAMEDPNGLLQQQVDPPNSKAEGQPLLHTRAPTSTTLPVQKRGPKKLIIKPKATKTDANANLNSNNTNSHSHRNANVKDINSQIIIEEALCELPTTSTKAQMEMQEKMRQSQQEQEQPTHHTIAQKLIKSEPSSSGYDSNTNRISINGNNSGHSILENHLTSNMDNNCGPIIQCKTEQVGSAQEAQTNFLQPFKEEDKDVSNSNDNAAATDDARVLLDFANSKKHEATHNVATNFLSATSIFSNSAGKVNEPKSATILPNTNTSSTESHAALRCEDEFIAHDDVQEVVISSSYSQSQSASDVPTSATSSTTTSHVRDLNVALQHQQQQQHHHHQQLQQQQQQQQQLQHNFTDYPFSFLYGHGGSVSGAPADTKGGNFSAIYQQAAQDATTAATLASGSNTIHTDDSTSSTQQQQAHTSHFGGVHGGSGEMGSTASHWYHHALATANADFEAALGVDCNAAVDGGDVGKYLDLDSCKREVLVGMPGAPSSTSSSFAAATESSLAGGCTADALNIRTDEKMPAKGEISGQESNCDIENSWSQPMYGEISARFFKTTFPGIFQHENGWNHDEYFTVQDLSASAAPTGAAPSNRPGKSFDFRLPLEATTSAAANATGSGNSNFQLFARHTDALPSTSTSNKKKRKRDTHVGGGGGGSSGAGRVEKATVSRVQPTATITSQQLLFPQPQNSQQLQAHEQLQPSSQNAESATSSTAAAAGANGTPTLGADQRRPRKKVYQCTHCTAEFPKLKDRNSHMILQHNYVRQNRRLICVQRPDAAASAAAPDALPSSSNAVAGGVDNVVVVNMAEGCSSSLVRSDSMEFLEDSKQDIVKIEVENAYQPLAASAAVVATAASTSTAGSGESIDAKPELVDDKKSMALLPASSLNIGGGVGDIAGEALDTKPLLQPLAMTTPATKLAALYRMLVSYNISTLKDSHNLSEMEQKLIEQSIFFCYVCRRNFSSVKLYDAHLNEHPAECFTCGKTFQRWKNFSLHLKRHLGWKEFGCNVCDKKFVVRSALVEHMRMHTGHTPLKCKVCGKYFKRYSNLTQHRKRHGKQIIRKKEYVCHCGEVLPSKARFLWHKETHDAKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPLCKQTFAKSSIKAHMATHSMDTQHDCAICNKSFSTKWNLKIHSWVHANRTSKPFKCEHCPKAFVREVDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01564016;
90% Identity: iTF_01564016;
80% Identity: -