Zcuc020153.1
Basic Information
- Insect
- Zeugodacus cucurbitae
- Gene Symbol
- -
- Assembly
- GCA_028554725.2
- Location
- CM053022.1:73522899-73524221[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-09 1.5e-05 25.7 0.3 3 45 213 255 212 255 0.92 2 2 6.1e-09 1.1e-05 26.1 0.0 11 40 331 359 325 365 0.83
Sequence Information
- Coding Sequence
- atgcttgaaaatgaGATAGAAGGGAATGCGAGCGAGCTCAACATCAACGGAGTAACAGGTGGTGATGGTTTGCACGATGTCGACGAGAAAGAAAATATAGTCAAATCAAATTTACAACACATTAAGGAGTGCAAAACAACAAACTCAGAAAAAGTATTCGTTCAACGAAAAGATGCTTTTGCGAAGCACCGCAACGAGTTCTTAGATGGTGTCAATGTTCTTATGCTTACTCATCATGACAATCAACATTTTCAATTCGAATATGTAACCTCGAAACAAGATGAGAACGTGCTGGATACACTCTCCGTAGTTGAACAGCACACAACATGCTATCAAATTGATGAAAAACTTAACAGTGAAAACTTGTCGATAAATCATATGAGTCGAGTTCCATTTGCTCAAAAACATATGGAAGATGAAGTGGTAGTTAAAGGGGAATTTCCGAGTGACAACAACCCAGTAAGCAATATAGATTTTGCCGCAATGGTGGCCGAGGCGTGCGAAGGGATTTTTGATGAAATCGAAAACGACTTGAGAGCATACAGTAACAACAGCGATAATAATGAACAATTTTCCGATTCGGCGTGTCATAGTCAAGCGCGTGTAGTGAAAAGGAAAAAACGAGCGCACAACTCAGAAGCGGTACAACAGGCGGCAAATGCCGTATTGGAAGGCCGTATGAGTTTGGGGGAGGCCGCTAAATGCTATAATGTGGTGCGTTCAACAGTATCTTCAAGAGTGGCCAAACATCCTAAACGTAAAAGAAGAAAATCGAATAAGCAATTAGAAGAGCTCATTTACAGTAAGCTGAAGGCTGGTGTGCAAATTTCGGAAATTTCGCGCTCTTTACATGTTCCCAAGTCAACCgttcatttatataaaacaagacTGAAAGATAATGGGTTGTTGCCTCCGGTGTGGATTAGGAATGGCAGTAAAGATATGGTGGATCACGGCGTTCAAGAACGACTATTGCAAGCATATCGTGGCCACATTGTAAACGGAATGTCAGTACGATTCGCAGCGGAGTTTTACTCGTTGCCGCTCACAACATTGTGGCGATACATAAAACGGAGGAAAGATCCCACAATGAATGTCGATGATCATCTTACGAAATCTGAAATGGAAGAATGCATTGAGggtgaaaattatattaacaaCCCTACAAATGACTTTGAAGATATAGAAATTGAAAAGAACCtgcaaattaatgaaatgaaatcacatCTATCTCCTGCTTCGTATCCCAAAGATCTGGAACcagttattgaaaaaaaagagcAAACGATAGAACAGTCTTTAATAAGTCAATTGTTGGACTAA
- Protein Sequence
- MLENEIEGNASELNINGVTGGDGLHDVDEKENIVKSNLQHIKECKTTNSEKVFVQRKDAFAKHRNEFLDGVNVLMLTHHDNQHFQFEYVTSKQDENVLDTLSVVEQHTTCYQIDEKLNSENLSINHMSRVPFAQKHMEDEVVVKGEFPSDNNPVSNIDFAAMVAEACEGIFDEIENDLRAYSNNSDNNEQFSDSACHSQARVVKRKKRAHNSEAVQQAANAVLEGRMSLGEAAKCYNVVRSTVSSRVAKHPKRKRRKSNKQLEELIYSKLKAGVQISEISRSLHVPKSTVHLYKTRLKDNGLLPPVWIRNGSKDMVDHGVQERLLQAYRGHIVNGMSVRFAAEFYSLPLTTLWRYIKRRKDPTMNVDDHLTKSEMEECIEGENYINNPTNDFEDIEIEKNLQINEMKSHLSPASYPKDLEPVIEKKEQTIEQSLISQLLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01563684;
- 90% Identity
- iTF_01563684;
- 80% Identity
- -