Zcuc022051.1
Basic Information
- Insect
- Zeugodacus cucurbitae
- Gene Symbol
- kn
- Assembly
- GCA_028554725.2
- Location
- CM053023.1:27713265-27725189[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.4e-52 5.7e-48 164.7 0.0 10 135 120 233 111 236 0.93
Sequence Information
- Coding Sequence
- ATGGCTCGTCATCGCTGCTGCTATGTGCCGATGTCTACGGCGTCACATTGCGGCCTAGCTGACTCGTTGGTTGtgctggctggctgCTTCTCGTATCAAGTGTCTTTAACTATCACCGCGTCAGCCCCTCCAGCTCCAACAATTTGCTCTTTTTCACATCCCCTACGTGCTTGTGACGGCCTCAAGCTGCGTTCCGACGAGCCAGTACCGGGCTTTAGCTCGGCCACCCCTTGGCCCACACTCGAGCTGGAATGGGGTCGCAAACTCTATCCGTCGACGGGTCCACGTTCGGCGAGCGGCCTGATGTTTGGCCTACCGCCGACCGCGGCGGATATGAATCAACCGCGCGGTCCCATGACATCGCTGAAAGAGGAGCCGTTAGGTGCGCGCGCCTGGATGCAACCGGTCATCGATCAGAGCAATTTGGGCATTGGTCGCGCTCACTTCGAAAAACAGCCGCCAAGTAATTTACGCAAATCCAACTTTTTCCACTTTGTCATCGCGTTATATGATCGTGCCGGTCAACCGATTGAAATCGAACGTACGgcatttattggttttattgaaAAGGACTCGGAGTCGGATgcgacaaaaacaaataatggcaTACAGTACCGGCTGCAGTTGCTCTATGCAAATGGTGCGCGTCAGGAGCAGGACATATTTGTGCGTCTCATCGATTCGGTGACAAAGCAGGTCGACACGGCACGCCTACACATCAActaa
- Protein Sequence
- MARHRCCYVPMSTASHCGLADSLVVLAGCFSYQVSLTITASAPPAPTICSFSHPLRACDGLKLRSDEPVPGFSSATPWPTLELEWGRKLYPSTGPRSASGLMFGLPPTAADMNQPRGPMTSLKEEPLGARAWMQPVIDQSNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQVDTARLHIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00090953;
- 90% Identity
- iTF_00090953; iTF_01189169;
- 80% Identity
- -