Basic Information

Insect: Zerene cesonia
Gene Symbol: -
Assembly: GCA_012273895.1
Location: JAAMXH010000031.1:1667980-1680452[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.8 2.5e+02 2.3 0.9 1 23 165 187 165 187 0.89

2 15 1.3 86 3.7 1.6 2 20 238 256 237 256 0.94

3 15 0.0055 0.36 11.2 2.7 1 23 277 300 277 300 0.96

4 15 0.71 47 4.6 2.5 2 22 337 357 337 360 0.88

5 15 0.85 56 4.3 1.6 2 23 363 384 362 384 0.96

6 15 0.1 6.8 7.2 2.5 1 23 821 843 821 843 0.96

7 15 0.22 14 6.2 2.0 1 23 848 870 848 870 0.96

8 15 0.61 40 4.8 0.6 1 23 888 909 888 909 0.86

9 15 0.095 6.3 7.3 2.5 3 23 956 976 955 976 0.95

10 15 7.4e-05 0.0049 17.1 0.3 2 23 992 1013 991 1013 0.96

11 15 9.2e-07 6e-05 23.1 3.2 1 23 1019 1041 1019 1041 0.99

12 15 7.4e-05 0.0049 17.1 0.7 3 23 1048 1068 1046 1068 0.95

13 15 0.0013 0.086 13.2 1.8 2 23 1075 1097 1074 1097 0.92

14 15 6.1 4e+02 1.6 0.2 1 10 1104 1113 1104 1123 0.84

15 15 0.0039 0.26 11.7 0.0 3 23 1136 1157 1135 1157 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.8	2.5e+02	2.3	0.9	1	23	165	187	165	187	0.89
2	15	1.3	86	3.7	1.6	2	20	238	256	237	256	0.94
3	15	0.0055	0.36	11.2	2.7	1	23	277	300	277	300	0.96
4	15	0.71	47	4.6	2.5	2	22	337	357	337	360	0.88
5	15	0.85	56	4.3	1.6	2	23	363	384	362	384	0.96
6	15	0.1	6.8	7.2	2.5	1	23	821	843	821	843	0.96
7	15	0.22	14	6.2	2.0	1	23	848	870	848	870	0.96
8	15	0.61	40	4.8	0.6	1	23	888	909	888	909	0.86
9	15	0.095	6.3	7.3	2.5	3	23	956	976	955	976	0.95
10	15	7.4e-05	0.0049	17.1	0.3	2	23	992	1013	991	1013	0.96
11	15	9.2e-07	6e-05	23.1	3.2	1	23	1019	1041	1019	1041	0.99
12	15	7.4e-05	0.0049	17.1	0.7	3	23	1048	1068	1046	1068	0.95
13	15	0.0013	0.086	13.2	1.8	2	23	1075	1097	1074	1097	0.92
14	15	6.1	4e+02	1.6	0.2	1	10	1104	1113	1104	1123	0.84
15	15	0.0039	0.26	11.7	0.0	3	23	1136	1157	1135	1157	0.94

Sequence Information

Coding Sequence: ATGGATAAATCTGATAAAATACGAAATAGGAAGACAAAGCTGATACCGAGGGAATTTGTTGATTCTGACGATGAATTACAAGAATTGCAGTATGAAGTTGAACAAACACTCGCTAGAATTAGAGGCGATAAGGCAAGCACATCCAATGAACAAACACAGCCACAGTTCTCCATCAAGGTGGAAGTCGAGGAGTGTTACGAAACCAATGATGACGTAGTCGAGCTCAACAGCTCAGACGAGGAACAACTGTCTGACCTAGAACAGGATGTCCACAACCTGAACCTTATGAGCGTGTTGGAGGCGTCCCACAAGCACATGGAAACCAGCACGAACATAGCTGATTTTACACTTCACATGGAGGTAGTTAATTACTGCAAGCAACCACCAGTACCCAACGTGAAGAGCAATCATGAACTCGTTCTGGAGAAGGCGCTAACGCGATGGCGCGATTGGTTCTCATTGGCAGCGGACCTGAGGGAACCGCCTCTTATATACAAATGCTATATTTGCAATCTCGCCTGGTGGCATTTAAGTGAATTTCGCAGTCATATATATGTGCACGTTTTCAAAACTTTCCGGGTGAGCCTCGAGATCATCAACTGCGTGCAGTGCAACATTGTAGCGTACGAGAAGATGGATAAAAGGTTCATAGATCCAGGCGCTAAATGCTGGAGGTGCGGGGAGCCGGGTAGTGAACACCAGAAACCCAATAAGTGCGGTGGATGCTCGAAGGACTTCTTCTCCTGCATGAAACTGGTGGAACACCAGTGGTACTGCGACGCGTTCAAAGCGAAGCAAATAAAGGTGTTTCAGAAAGCGAAGAAGATGTACAAATGCCATCTGTGCCCGAGATATTATTTTCAGGAGGACACCCTGTTCGACCACATGGTGTCGCGGCATTCAGTGCGAACGGACGTGCCGGTTGCGTGGACGCTAGTGTTTTGCCAAGAGTGTAGGGAGAACGTCGAGGATTATAGCCACGTGTGCGCTGGCAAAGTGCCAAACGAAACGTGCGTCCACTGCAACAGATTGTTCCATTCGAAGGCCCTTCTGGCGTTGCATAAGCTGGTCTCAAAGCATCCAAAAGTGTGTCGTGTATGTATGAAACGTGTGTCCAAAGAGTGTATGCTAGCGGTGCATATGATGAGACATACAGACAGTTACTTATTGCTGTATAGGTGTTTATTGTGCCCGAAACCAGTGTATTTGGATCCGACGAGGCTGCTCACGCATTCTGTGGAGACACACCAGACATCGGACGGTTATAGTGTACCACATGAATTTATGTTTATACCTATGACATTTTTACGAAAACATGGAGTGGATGCTGAGATAAGTGAtcttagtaatattaaaataaatcctgTAATTACAGTGAATTTTGTTTCAGAAGGTGCTAGAAAAACAGAAGCCGTACATAACATGGTGCAAGATGATGAAGTAACTCCAATTATAAACGAagcgaaaaatataaatagtagaAACAGAATTGAAACTCCACCTAACACTGAAGTAATAGATACTGAACTTAAAGAAACACCACAAGAAACTATAGTCAATGTACCCACAGGTGTAAATGATGATGTTACACAACgtgttcaaataaaagaagaaaaagtcGACGATATTCACGAAATGGAGGTAGATAACGAAATCGGGAATAGACAAGAATGCATTGACGCTGTTGCTAATCTAATAGAAAACGTTAAAACTGAGCTTGAAGTTCAATTTGATAATGCAGAACAAACAATGTGTCCCATAGTGACCAATGTTGTTAGTTTCGCAAACATCAATGAAAACAACGTTACTGATGTTAATATGGTAAATAGTAATGCTGATGCTGCAGAAGAAACTAATCAAAATGATTTACAAGCTCAAGAGAGCATACATTCATCAACAGATCTTAAAATGTCGATCGATGATGTCACGAACAGTATAAATATACCAAACCCAGTGGCTAACATTGAAATTAAGTTATCGTACCAGAACAATGATTTGAAGATCAAAGAGGAACCGCTGCCAGATGAAATTCAAGATTCCAATTGGAAACTGAGTGACATACGCAAGATATATCACATAGACGTGAATTTGTCAGCGGAGCCGACGAacggaataaatataaagcaagAAATCGATGTGAATGGTAAATGTGAGAACAACTGGGAGCTATTGTCGAATGTGTTTGAGAATTTCAACGAAGCGAGACAAGAGACGGATGATGAATATGAGAatgatttgattataattgaGCCGAAGGAAGAGATAGTGACTATTAACTCGGAGGATGATTTAAGTTCTCACTCGGATGCGGATGATAGCGACAGTGCGGGGAAGAAGAAAcgccGCTACCAATGCAGGAGATGCGATTTCATCGGCGTACACAGGGAGTACGCGGCGCACAAGAGGGACAGCTGCGTCAGCAAGCGCAGGAGTCCGCGGCCGGAGATACACGCCGCGAACTATCCGTGCTCCACCTGCAAGGTCACCTTCAGCAGCTTCAGACGCTACCTCAGACACTTCTCCGTTCACAAGTTTCCGAAACACGCGTGTCCACAGTGTTTCAATATAAGCAGCTCGCATGTGAAGCTCGAGAGGCACGTGCTGACGCACGTGCGGAGTCTGTTCGTCAGTTTCCGGTCGATTAAAGTGGTGAAAAGTACGTTTAAGTGTAAAGTGTGCGATTTGAGTGTGAATCGTGATGTGTTCTTCGAGCATTGGGAGCGGCATTTGGAGATCAAGGAGTGGGGGTTCAATGAGGTCACAGTGAAGAGGGAGGTGGACTATGATCCTGGGGTTCGGAGAGTTATTGAAATACTCACACACCCGGACAAAATGGCGAAACAGCTGTCGGCCAAGTACAGGTCGTGTGTGGTGTGCAACCGCCGCTTCAACAGACGGAACGACTGCATGCGACATATCATAGAGCACCTGCTGCTCGACGCTTTTAAGAATAAATCGAAGTACACAGTACTCAAGTGTCAGATATGCGGGGAAGGCTTTGAGAAGCCGGAGGGCTTCCGCCGCCACTTACGCTTTCACGCGTCTCTGCCTGTCTACAAATGCGAGCTGTGCAACAAAACGTTCAGCGATTCGAGCAATTTCTCCAAGCACAAGAAGGTCCACAACCTGCGGATAGTGATATGCGATATATGCGGCAAGAAGTTTAATAATAAGCTCTGTCTGATCAAGCATATAGagGGGCACTCGACCGCCGAGCCGGTGCAGTGCGGGCGGTGCGGCAAGCGGTTCTACAGCGGGTCGGCGCTGCGCAAGCACCACACGCAGATGCACGACAAGCTGTCGCCGAAGTTCAAGTGCCAGCAGTGCCAGCTGCGCTTCCTCACGCTGCGCGAGAAGTGGGACCACTTGTGGCACGTGCACAAGGAGCGATCGACGAAGGCCGACTGCCCGACGTGCGGCGCCGAGTTCCGGCGGGCGCGGGACGTGAAGGCGCACGTGGACAGCGTGCACAGGAAGATGGTGACTGTGAAGGCTGACTCCAGCAAGGAGGTCGTGAAGATCGAATTTGACGTGCGTGATGTGCAGATAGACGAATGA
Protein Sequence: MDKSDKIRNRKTKLIPREFVDSDDELQELQYEVEQTLARIRGDKASTSNEQTQPQFSIKVEVEECYETNDDVVELNSSDEEQLSDLEQDVHNLNLMSVLEASHKHMETSTNIADFTLHMEVVNYCKQPPVPNVKSNHELVLEKALTRWRDWFSLAADLREPPLIYKCYICNLAWWHLSEFRSHIYVHVFKTFRVSLEIINCVQCNIVAYEKMDKRFIDPGAKCWRCGEPGSEHQKPNKCGGCSKDFFSCMKLVEHQWYCDAFKAKQIKVFQKAKKMYKCHLCPRYYFQEDTLFDHMVSRHSVRTDVPVAWTLVFCQECRENVEDYSHVCAGKVPNETCVHCNRLFHSKALLALHKLVSKHPKVCRVCMKRVSKECMLAVHMMRHTDSYLLLYRCLLCPKPVYLDPTRLLTHSVETHQTSDGYSVPHEFMFIPMTFLRKHGVDAEISDLSNIKINPVITVNFVSEGARKTEAVHNMVQDDEVTPIINEAKNINSRNRIETPPNTEVIDTELKETPQETIVNVPTGVNDDVTQRVQIKEEKVDDIHEMEVDNEIGNRQECIDAVANLIENVKTELEVQFDNAEQTMCPIVTNVVSFANINENNVTDVNMVNSNADAAEETNQNDLQAQESIHSSTDLKMSIDDVTNSINIPNPVANIEIKLSYQNNDLKIKEEPLPDEIQDSNWKLSDIRKIYHIDVNLSAEPTNGINIKQEIDVNGKCENNWELLSNVFENFNEARQETDDEYENDLIIIEPKEEIVTINSEDDLSSHSDADDSDSAGKKKRRYQCRRCDFIGVHREYAAHKRDSCVSKRRSPRPEIHAANYPCSTCKVTFSSFRRYLRHFSVHKFPKHACPQCFNISSSHVKLERHVLTHVRSLFVSFRSIKVVKSTFKCKVCDLSVNRDVFFEHWERHLEIKEWGFNEVTVKREVDYDPGVRRVIEILTHPDKMAKQLSAKYRSCVVCNRRFNRRNDCMRHIIEHLLLDAFKNKSKYTVLKCQICGEGFEKPEGFRRHLRFHASLPVYKCELCNKTFSDSSNFSKHKKVHNLRIVICDICGKKFNNKLCLIKHIEGHSTAEPVQCGRCGKRFYSGSALRKHHTQMHDKLSPKFKCQQCQLRFLTLREKWDHLWHVHKERSTKADCPTCGAEFRRARDVKAHVDSVHRKMVTVKADSSKEVVKIEFDVRDVQIDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -