Basic Information

Insect: Zerene cesonia
Gene Symbol: -
Assembly: GCA_012273895.1
Location: CM022609.1:6990140-6996397[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.3e-05 0.00089 19.4 3.3 1 23 182 204 182 204 0.98

2 10 0.00036 0.024 15.0 2.5 1 23 210 233 210 233 0.97

3 10 0.0029 0.19 12.1 3.3 1 20 240 259 240 262 0.94

4 10 0.33 22 5.6 3.1 1 23 269 291 269 291 0.96

5 10 0.034 2.2 8.7 4.1 1 23 325 348 325 348 0.95

6 10 0.042 2.8 8.4 2.4 2 23 354 373 353 373 0.96

7 10 1.6e-07 1.1e-05 25.5 1.9 1 23 379 401 379 401 0.98

8 10 6.4e-06 0.00042 20.5 2.3 1 23 407 429 407 429 0.99

9 10 0.00017 0.011 15.9 0.3 1 23 435 458 435 458 0.96

10 10 0.003 0.2 12.1 1.2 1 21 464 484 464 485 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.3e-05	0.00089	19.4	3.3	1	23	182	204	182	204	0.98
2	10	0.00036	0.024	15.0	2.5	1	23	210	233	210	233	0.97
3	10	0.0029	0.19	12.1	3.3	1	20	240	259	240	262	0.94
4	10	0.33	22	5.6	3.1	1	23	269	291	269	291	0.96
5	10	0.034	2.2	8.7	4.1	1	23	325	348	325	348	0.95
6	10	0.042	2.8	8.4	2.4	2	23	354	373	353	373	0.96
7	10	1.6e-07	1.1e-05	25.5	1.9	1	23	379	401	379	401	0.98
8	10	6.4e-06	0.00042	20.5	2.3	1	23	407	429	407	429	0.99
9	10	0.00017	0.011	15.9	0.3	1	23	435	458	435	458	0.96
10	10	0.003	0.2	12.1	1.2	1	21	464	484	464	485	0.95

Sequence Information

Coding Sequence: ATGGCTAATGTTAAGAGTAGAGTTAATACGACTAAAGCTGCATCTACAAAGATTAACACAAAGGGGAAGGTTGGCAGGCCCAGAAAATCTTTAACAAATGTACAAAATGTGACAGGAAAAGAAGTTGTACAAAGACAACGAAGAGgtaaagtaaagaaaaagcCGGAAAAAAAGGTAACTATATGTAGATTGAATACAACACAGGAGGAGAATAAAtccaatgaatataaaaaaccaAGCCTTAAAAAGTTATTGACTACTAGTGGCCGCATAAGACAAAAAACAAAGATTGGTATAAAGCTCTTTAATGAGCTTCTAAAGAATGAACTTCAGATTAAAGCCAGTGACTTATTACCGAAAAAAGAAgtgtacaaaaatacaaggctaaataataatgaaacaaaagtAAGAAAAAGATCGAAAGCAGGTAACCAAAAAGGAAATAACCAAAATAATAGGCAGAGTGATAGTAGTGAAAAAAGTAAAGCTAACGTTGAGCCTGGCCAGGATCTCAATAGTGAAACATCAACTCCTCTTAAAGTTTTCCAATGTGatcattgcaataaaaaatttaaaactaaacctGCAATAAAAAGACACCTTTCCATTCATGATAAGCTGACATCATATTCTTGTTCCCAATGCAACAAATACTTCAGCAATCATATATATCTAGCAGCCCATGCTAAAAGACAACATCCAAACTGgaacatacattttatgtgtaatatatgtgataaagcatttttacttaaatcaaatttaaagcaCCATTTGGCTTGTCATAGCCGTAATGAAAAAATGTTCAAGTGTATTTATTGCAAGGAGAAATATTATGAGCAACATTCCCTTATTGAACATGAGAAACAGCATTTGGTAGATGGAAAATATCTATGCATTGTTTGTGAAATGGGATTTGACTGTAGGAACCGGCTCACCAGTCATTATAGAGTACATTTGAAAGTGAAAGATTTCATGTGTCAACATTGTGGCAAAGAGTTTCTTAGAATGAACTCGGTGAGACGTCATGTCCAAATATGTCATTCAGGACACAGGATACAgtgtaaaatatgtaaaaaatatttgaagggTCATTTAGCTGAGCATATGCGCACGCATGAAAAGAATCGCCCGCATGAATGCCCTGATTGTGGACAACGTTTCACACAGTCAACGCAATTAACTGTTCATCGTCGGTCACATAGTGGAACCCGTCCTTACACTTGTAGAATATGCAAGAGACCATTTACACACTCAAATGCCTTGATGTTACATATACGTCGGCACACAGGTGAAAAGCCATTTGCCTGTGCCATGTGTCCATTGAATTTTTCTCAACTCCCACACATGAAAGCACACATGCGAAACATTCATGGCAAAGAAAACCCATATAGATgtcaaaaatgtaaacaattctTTAAATTGAAGGCTGATTTAGCAGATCACacaaaaaattgcaatacAGATCAAAAAAGTGCAAAGTCATCACAGAAGGGCGAATCAGAAGAGGAATCTGCCACTAGGCTGACTCGCATGAGGTTTCTACTAGCTCTTCTTCTAACAATGATTGCGACTAAAGAAAAACTGAAATATCTAGGTTTCAACAAACGCTTGATTGATGAATTACTTGTGGAGTCCCTTGAAGCCATGGGGCATAAACCATGCAAAGATTTTGCTTTAACGCCTTTCAATCGCCTCAAGACTAATATCGAAATACTACTTGAAGGAACTGTGCCTAAAGAACAAATGGAAAAACTTAAgaaggaaaataaaactacagAGCAAATTTTAGAACTCCTGACTGATGAGAAAAAGCGCAGTTAA
Protein Sequence: MANVKSRVNTTKAASTKINTKGKVGRPRKSLTNVQNVTGKEVVQRQRRGKVKKKPEKKVTICRLNTTQEENKSNEYKKPSLKKLLTTSGRIRQKTKIGIKLFNELLKNELQIKASDLLPKKEVYKNTRLNNNETKVRKRSKAGNQKGNNQNNRQSDSSEKSKANVEPGQDLNSETSTPLKVFQCDHCNKKFKTKPAIKRHLSIHDKLTSYSCSQCNKYFSNHIYLAAHAKRQHPNWNIHFMCNICDKAFLLKSNLKHHLACHSRNEKMFKCIYCKEKYYEQHSLIEHEKQHLVDGKYLCIVCEMGFDCRNRLTSHYRVHLKVKDFMCQHCGKEFLRMNSVRRHVQICHSGHRIQCKICKKYLKGHLAEHMRTHEKNRPHECPDCGQRFTQSTQLTVHRRSHSGTRPYTCRICKRPFTHSNALMLHIRRHTGEKPFACAMCPLNFSQLPHMKAHMRNIHGKENPYRCQKCKQFFKLKADLADHTKNCNTDQKSAKSSQKGESEEESATRLTRMRFLLALLLTMIATKEKLKYLGFNKRLIDELLVESLEAMGHKPCKDFALTPFNRLKTNIEILLEGTVPKEQMEKLKKENKTTEQILELLTDEKKRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00358940; iTF_00357986;
90% Identity: -
80% Identity: -