Zces015761.1
Basic Information
- Insect
- Zerene cesonia
- Gene Symbol
- -
- Assembly
- GCA_012273895.1
- Location
- JAAMXH010000035.1:1826642-1832012[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.023 1.5 9.3 0.4 1 23 51 74 51 74 0.93 2 20 0.14 9.1 6.8 4.2 2 23 150 171 149 171 0.96 3 20 0.18 12 6.4 0.1 1 23 175 197 175 197 0.97 4 20 0.51 34 5.0 3.2 3 23 204 225 202 225 0.93 5 20 0.015 0.96 9.9 0.8 2 23 233 255 232 255 0.93 6 20 5.4e-05 0.0036 17.5 0.3 1 23 317 339 317 339 0.97 7 20 0.14 9.4 6.8 0.0 2 23 372 394 371 394 0.91 8 20 0.0017 0.11 12.9 2.2 2 23 417 438 416 438 0.97 9 20 0.027 1.8 9.0 1.5 1 23 442 464 442 464 0.98 10 20 3.2 2.1e+02 2.5 0.6 1 9 469 477 469 480 0.87 11 20 0.0071 0.47 10.9 0.8 1 23 538 560 538 560 0.96 12 20 0.23 15 6.1 0.0 2 23 593 615 592 615 0.92 13 20 0.00047 0.031 14.6 2.7 2 23 638 659 637 659 0.97 14 20 0.14 9.2 6.8 0.6 1 23 663 685 663 685 0.97 15 20 0.42 27 5.3 0.4 1 12 690 701 690 703 0.86 16 20 0.44 29 5.2 2.5 2 22 721 741 720 743 0.83 17 20 0.044 2.9 8.4 0.3 2 23 754 776 753 776 0.96 18 20 0.0086 0.57 10.6 1.6 1 23 782 804 782 804 0.96 19 20 0.00018 0.012 15.9 6.2 1 23 810 832 810 832 0.99 20 20 0.0017 0.11 12.8 2.0 1 23 838 861 838 861 0.98
Sequence Information
- Coding Sequence
- ATGGTAGGTAAGACAACCGGCCTTAGCAACGCGAAAGACACTGGATTAAAACGCGAATTTTCCGACGTGCTAAGTAAAACAAAGATAAACGTCAAGGAAGTTTTGCTTAACACAAATGCGACGCCGATTCGTTGCAAAATCGGAATTGGTTATTCCTGTTGTTTCTGCATAAAGCAATTCCCCGATCCAGCCGATCTAAAAGCTCATACATTAGCAATACATGTTAAAAGTGCTGACGATCTAAACAATAGCAATATAAAAAGGGTGACTGGCCGTGGAAGGAATAAGCTCTGCGTTAAATTAGATGTTACAGGGCTTGAATGTAAATTATGCAGCAATCCAATATCGTTCGATGAAATGTTTAATCATCTCAAAGACCACCACAGAAGGATCTTCACAGATGTGAGCAATCATATAATCCCATTTAGATTCGATAGCGATAAACTTCACTGCTGTTTGTGCTCTAAAGAGTTCAAGGCCTTTAAAACATTGTTAGAACACATGAATGTACATTTCAGTAACTATATATGCGATATATGCTCAGCGGGTTTCCTAAATGAAGCAAAATTAACGTTGCATAAGATGTCCCATCCATCTGGACAACACCTATGCAGCTATTGCTCGAAAGTCTGTGATACAAAAGCGAAGAAAGTGGCGCACGAGAAGAGCGTTCATTTGAACGCAAGGAATTTGACTGTATGCGGATATTGCAAGGAGAAATTCAAGAGCCAGAGTCGGAAAGAGATCCATTTGAACGAAATGCACGGTGTCCCGTTGCCGAAACGAGAGAAGGCGACATGTAAAAAGGAAGGCAGCTTGAAGATTGAAACGGAATACCAGGAAAACGAAACTCCAAGTGACCATGTGTATTCAAAAACAAAGTCTAACATAGCTGAGATTTTGAAGTGCACCAATGCCACCATAATAAGGTGCAGGGGTGGTATAGGCTATCGATGCTCTTTTTGCAAGGAAGAATTTCCCGACCCAGCTGATCTTAAGAAACACACATTAGAGCACACTGAAGGCATTGATGTCTTCTCCAATAAAATCCTAAGAAAAATTGTGGGTAGAGAGCAAAGTAAATTGTGCGTTAAATTAGACATAACATCGCTCACGTGTAACATATGTGGATCAGCTATCGCTTCACTCGAAGACCTGTTCCAGCATTTAGTGAACGAACATAAAAGGACTATTTACACTGATATAAAAAACCACATAGTACCATTCAAATTTGATACGGAACAGTTACGCTGCTGCATTTGCTCGAAGGAATACAATTCGTTCAAAGCCTTATTAGAACACATGAACACGCACAGCGCCAACTATGTGTGCAACATCTGCTGCGCTACGTTtgtgaataaaggaaaggttAAAGTTCATAAATTGACTCACGTCATCGGCGAATACAAGTGCAGATATTGTCCCAAGATACTGGACACCATAGTGAAAAAGACGTGTAATATTGAATCCAGCGTAGACTTCAAGATAGAAAAAGCAGAATTCAAAGATACGCCGACCAGGAACGAcgtgtataaaaaaacaaagcgGAACATATCGGAGATTTTGAAGTGCACCAACGCCACCCCTATCAGATGCAGAGGTGGCATAGGATACATGTGCTGCTTCTGCAAGGAACAGTACCCAAATCCTGCTGACTTGAAAATACACACACTGGAGCACTACGCAAATATCGAAGCCTTCagtaataaaattcttaagaCAATTATGGGCATAGCTGAACATAGGCTGTGTATTAAGTTAGACATCACGGCCTTGTCTTGTAACATATGCGATGTAAATATCGATTCATTAGATGACCTATTCGAGCATCTGATTGAATCGCACGATAGGATAATACACAGAGATATAAAAAACCATATAGTACCGTTTAAATTTGAGACAGAAGATATATCGTGCTGTATATGCTCGAAGAAATTCAACTCCTTTAAGGCTCTATTGGAGCACATGAATACGCACAGTACAAATTACGTATGCAACATCTGCTGTGCGACTTTCGTGAATAAAGCAAAGATATCTGTCCACGAATTGACGCATGTTATAAGTGAATTCAAATGCAGCTATTGCCCGAAAGTGTTGGATACGAAATTGAAGAAGGCCTGCCACGAGAGCAACGCGCATAAAAACGTGAACAAAATTAGCAAATGTGGTTACTGCAATGAAAAGTTTAGCAGCCATAAAAGGAAAGAGATGCATCTATATGAAATGCACGGGGTGCCGCTGCCCAAAATAGACAGGGTCACTTGCAAGATATGCATACGCGAATTTCTCAACAAGAACGCGTTGAACGCACACTTGCGGCGTATACATTTATTGGAGAAGTCACATAAGTGTGAGTTTTGCGATAAGGAGTTTTTCGCGTTGAACGAACTGAACAACCACGTGGTGAAGCACACTGGGGGACGGAATTTTCAGTGTCACTTATGTTTGCGCGCGTATAAGAGGAAGAAAACTCTCACGGCGCACATGCACACGCATTCAGATGAAATACGTTTCAAGTGTGATCTGTGCGAGCTGACTTATTTGCAGAAAAGCACGTGGCGCACGCATATGCGGACTAAGCATGAGATTGAAGTGTAG
- Protein Sequence
- MVGKTTGLSNAKDTGLKREFSDVLSKTKINVKEVLLNTNATPIRCKIGIGYSCCFCIKQFPDPADLKAHTLAIHVKSADDLNNSNIKRVTGRGRNKLCVKLDVTGLECKLCSNPISFDEMFNHLKDHHRRIFTDVSNHIIPFRFDSDKLHCCLCSKEFKAFKTLLEHMNVHFSNYICDICSAGFLNEAKLTLHKMSHPSGQHLCSYCSKVCDTKAKKVAHEKSVHLNARNLTVCGYCKEKFKSQSRKEIHLNEMHGVPLPKREKATCKKEGSLKIETEYQENETPSDHVYSKTKSNIAEILKCTNATIIRCRGGIGYRCSFCKEEFPDPADLKKHTLEHTEGIDVFSNKILRKIVGREQSKLCVKLDITSLTCNICGSAIASLEDLFQHLVNEHKRTIYTDIKNHIVPFKFDTEQLRCCICSKEYNSFKALLEHMNTHSANYVCNICCATFVNKGKVKVHKLTHVIGEYKCRYCPKILDTIVKKTCNIESSVDFKIEKAEFKDTPTRNDVYKKTKRNISEILKCTNATPIRCRGGIGYMCCFCKEQYPNPADLKIHTLEHYANIEAFSNKILKTIMGIAEHRLCIKLDITALSCNICDVNIDSLDDLFEHLIESHDRIIHRDIKNHIVPFKFETEDISCCICSKKFNSFKALLEHMNTHSTNYVCNICCATFVNKAKISVHELTHVISEFKCSYCPKVLDTKLKKACHESNAHKNVNKISKCGYCNEKFSSHKRKEMHLYEMHGVPLPKIDRVTCKICIREFLNKNALNAHLRRIHLLEKSHKCEFCDKEFFALNELNNHVVKHTGGRNFQCHLCLRAYKRKKTLTAHMHTHSDEIRFKCDLCELTYLQKSTWRTHMRTKHEIEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -